RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
POLR1A-204ENST00000424089 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
POLR1A-204ENST00000424089 AKNAQ7Z591 1439 aa15.24■□□□□ 0.03
POLR1A-204ENST00000424089 NUP153P49790 1475 aaKnown RBP15.23■□□□□ 0.03
POLR1A-204ENST00000424089 RANGAP1P46060 587 aaPredicted RBP15.23■□□□□ 0.03
POLR1A-204ENST00000424089 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
POLR1A-204ENST00000424089 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
POLR1A-204ENST00000424089 ZFYVE16Q7Z3T8 1539 aa15.21■□□□□ 0.03
POLR1A-204ENST00000424089 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
POLR1A-204ENST00000424089 ZMYM4Q5VZL5 1548 aa15.2■□□□□ 0.02
POLR1A-204ENST00000424089 FER1L4A9Z1Z3 1794 aa15.2■□□□□ 0.02
POLR1A-204ENST00000424089 MAGI2Q86UL8 1455 aa15.19■□□□□ 0.02
POLR1A-204ENST00000424089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.17■□□□□ 0.02
POLR1A-204ENST00000424089 MLECQ14165 292 aa15.16■□□□□ 0.02
POLR1A-204ENST00000424089 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
POLR1A-204ENST00000424089 SPATA31D1Q6ZQQ2 1576 aa15.15■□□□□ 0.02
POLR1A-204ENST00000424089 DMRT2Q9Y5R5 561 aa15.14■□□□□ 0.01
POLR1A-204ENST00000424089 HECW1Q76N89 1606 aa15.14■□□□□ 0.01
POLR1A-204ENST00000424089 PREX1Q8TCU6 1659 aa15.13■□□□□ 0.01
POLR1A-204ENST00000424089 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
POLR1A-204ENST00000424089 SIGLEC1Q9BZZ2 1709 aa15.12■□□□□ 0.01
POLR1A-204ENST00000424089 SCAPERQ9BY12 1400 aa15.09■□□□□ 0.01
POLR1A-204ENST00000424089 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
POLR1A-204ENST00000424089 C9orf84Q5VXU9 1444 aa15.09■□□□□ 0.01
POLR1A-204ENST00000424089 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
POLR1A-204ENST00000424089 ATP10AO60312 1499 aa15.08■□□□□ 0.01
POLR1A-204ENST00000424089 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0.01
POLR1A-204ENST00000424089 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0
POLR1A-204ENST00000424089 PLCH2O75038 1416 aa15.08■□□□□ 0
POLR1A-204ENST00000424089 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
POLR1A-204ENST00000424089 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
POLR1A-204ENST00000424089 CDK13Q14004 1512 aaKnown RBP15.06■□□□□ 0
POLR1A-204ENST00000424089 RRBP1Q9P2E9 1410 aaKnown RBP15.05■□□□□ -0
POLR1A-204ENST00000424089 FYCO1Q9BQS8 1478 aa15.05■□□□□ -0
POLR1A-204ENST00000424089 SETD1BQ9UPS6 1966 aaKnown RBP15.05■□□□□ -0
POLR1A-204ENST00000424089 TIAM1Q13009 1591 aa15.04■□□□□ -0
POLR1A-204ENST00000424089 EFCAB2Q5VUJ9 269 aa15.04■□□□□ -0
POLR1A-204ENST00000424089 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
POLR1A-204ENST00000424089 CEBPAP49715 358 aaPredicted RBP15.03■□□□□ -0
POLR1A-204ENST00000424089 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
POLR1A-204ENST00000424089 ZNF518AQ6AHZ1 1483 aa15.02■□□□□ -0
POLR1A-204ENST00000424089 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
POLR1A-204ENST00000424089 STRCQ7RTU9 1775 aa15.02□□□□□ -0.01
POLR1A-204ENST00000424089 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
POLR1A-204ENST00000424089 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
POLR1A-204ENST00000424089 KIF14Q15058 1648 aa15□□□□□ -0.01
POLR1A-204ENST00000424089 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
POLR1A-204ENST00000424089 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
POLR1A-204ENST00000424089 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
POLR1A-204ENST00000424089 KDM5CP41229 1560 aa14.97□□□□□ -0.01
POLR1A-204ENST00000424089 REREQ9P2R6 1566 aa14.96□□□□□ -0.01
POLR1A-204ENST00000424089 PTPRTO14522 1441 aa14.95□□□□□ -0.02
POLR1A-204ENST00000424089 C3P01024 1663 aa14.95□□□□□ -0.02
POLR1A-204ENST00000424089 DIP2CQ9Y2E4 1556 aa14.94□□□□□ -0.02
POLR1A-204ENST00000424089 TROQ12816 1431 aaPredicted RBP14.93□□□□□ -0.02
POLR1A-204ENST00000424089 AFAP1Q8N556 730 aa14.93□□□□□ -0.02
POLR1A-204ENST00000424089 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
POLR1A-204ENST00000424089 UBAP1LF5GYI3 381 aa14.92□□□□□ -0.02
POLR1A-204ENST00000424089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.92□□□□□ -0.02
POLR1A-204ENST00000424089 ABCA6Q8N139 1617 aa14.92□□□□□ -0.02
POLR1A-204ENST00000424089 IQSEC2Q5JU85 1478 aa14.91□□□□□ -0.02
POLR1A-204ENST00000424089 MLH3Q9UHC1 1453 aa14.9□□□□□ -0.02
POLR1A-204ENST00000424089 CDC42BPBQ9Y5S2 1711 aa14.9□□□□□ -0.02
POLR1A-204ENST00000424089 AGLP35573 1532 aa14.9□□□□□ -0.02
POLR1A-204ENST00000424089 TRAPPC8Q9Y2L5 1435 aa14.9□□□□□ -0.02
POLR1A-204ENST00000424089 CNTLNQ9NXG0 1405 aa14.89□□□□□ -0.03
POLR1A-204ENST00000424089 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
POLR1A-204ENST00000424089 ITSN2Q9NZM3 1697 aa14.87□□□□□ -0.03
POLR1A-204ENST00000424089 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
POLR1A-204ENST00000424089 LTBP4Q8N2S1 1624 aa14.87□□□□□ -0.03
POLR1A-204ENST00000424089 ABCC1P33527 1531 aa14.87□□□□□ -0.03
POLR1A-204ENST00000424089 NCOA1Q15788 1441 aa14.86□□□□□ -0.03
POLR1A-204ENST00000424089 LRRIQ1Q96JM4 1722 aa14.85□□□□□ -0.03
POLR1A-204ENST00000424089 MROH2AA6NES4 1674 aa14.84□□□□□ -0.03
POLR1A-204ENST00000424089 MTUS2Q5JR59 1369 aa14.84□□□□□ -0.03
POLR1A-204ENST00000424089 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.03
POLR1A-204ENST00000424089 CAMSAP1Q5T5Y3 1602 aa14.83□□□□□ -0.04
POLR1A-204ENST00000424089 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
POLR1A-204ENST00000424089 SUPT6HQ7KZ85 1726 aaKnown RBP14.82□□□□□ -0.04
POLR1A-204ENST00000424089 NPATQ14207 1427 aa14.82□□□□□ -0.04
POLR1A-204ENST00000424089 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
POLR1A-204ENST00000424089 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
POLR1A-204ENST00000424089 EHBP1L1Q8N3D4 1523 aa14.8□□□□□ -0.04
POLR1A-204ENST00000424089 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
POLR1A-204ENST00000424089 NCKAP5LQ9HCH0 1330 aa14.78□□□□□ -0.04
POLR1A-204ENST00000424089 PIP4K2BP78356 416 aa14.77□□□□□ -0.05
POLR1A-204ENST00000424089 ZNF142P52746 1687 aaPredicted RBP14.77□□□□□ -0.05
POLR1A-204ENST00000424089 SAMD9LQ8IVG5 1584 aa14.77□□□□□ -0.05
POLR1A-204ENST00000424089 FGD6Q6ZV73 1430 aa14.76□□□□□ -0.05
POLR1A-204ENST00000424089 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
POLR1A-204ENST00000424089 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
POLR1A-204ENST00000424089 HSPA1LP34931 641 aa14.76□□□□□ -0.05
POLR1A-204ENST00000424089 PKD2Q13563 968 aa14.76□□□□□ -0.05
POLR1A-204ENST00000424089 CLTCQ00610 1675 aaKnown RBP14.76□□□□□ -0.05
POLR1A-204ENST00000424089 MYO3AQ8NEV4 1616 aa14.76□□□□□ -0.05
POLR1A-204ENST00000424089 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
POLR1A-204ENST00000424089 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
POLR1A-204ENST00000424089 ZNF777Q9ULD5 760 aaPredicted RBP14.75□□□□□ -0.05
POLR1A-204ENST00000424089 PLA2R1Q13018 1463 aa14.75□□□□□ -0.05
POLR1A-204ENST00000424089 MYOM3Q5VTT5 1437 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms