RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
TRIM49D1-201ENST00000420869 ADGRL2O95490 1459 aa12.45□□□□□ -0.42
TRIM49D1-201ENST00000420869 TEX14Q8IWB6 1497 aa12.44□□□□□ -0.42
TRIM49D1-201ENST00000420869 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
TRIM49D1-201ENST00000420869 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
TRIM49D1-201ENST00000420869 RPRD2Q5VT52 1461 aaKnown RBP12.42□□□□□ -0.42
TRIM49D1-201ENST00000420869 CCER2I3L3R5 266 aa12.41□□□□□ -0.42
TRIM49D1-201ENST00000420869 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
TRIM49D1-201ENST00000420869 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
TRIM49D1-201ENST00000420869 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.42
TRIM49D1-201ENST00000420869 GPATCH8Q9UKJ3 1502 aaKnown RBP12.4□□□□□ -0.42
TRIM49D1-201ENST00000420869 PZPP20742 1482 aa12.4□□□□□ -0.42
TRIM49D1-201ENST00000420869 SHROOM2Q13796 1616 aa12.39□□□□□ -0.43
TRIM49D1-201ENST00000420869 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
TRIM49D1-201ENST00000420869 RRP7BPQ9NSQ0 103 aa12.39□□□□□ -0.43
TRIM49D1-201ENST00000420869 SHANK2Q9UPX8 1470 aa12.39□□□□□ -0.43
TRIM49D1-201ENST00000420869 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
TRIM49D1-201ENST00000420869 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
TRIM49D1-201ENST00000420869 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
TRIM49D1-201ENST00000420869 ABCC10Q5T3U5 1492 aa12.38□□□□□ -0.43
TRIM49D1-201ENST00000420869 MBD5Q9P267 1494 aa12.38□□□□□ -0.43
TRIM49D1-201ENST00000420869 ANKRD30BQ9BXX2 1392 aa12.37□□□□□ -0.43
TRIM49D1-201ENST00000420869 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
TRIM49D1-201ENST00000420869 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
TRIM49D1-201ENST00000420869 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
TRIM49D1-201ENST00000420869 MYO5CQ9NQX4 1742 aa12.35□□□□□ -0.43
TRIM49D1-201ENST00000420869 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
TRIM49D1-201ENST00000420869 MPHOSPH9Q99550 1183 aa12.34□□□□□ -0.43
TRIM49D1-201ENST00000420869 KDM5CP41229 1560 aa12.34□□□□□ -0.43
TRIM49D1-201ENST00000420869 NCOA1Q15788 1441 aa12.33□□□□□ -0.43
TRIM49D1-201ENST00000420869 HIRIP3Q9BW71 556 aaPredicted RBP12.33□□□□□ -0.44
TRIM49D1-201ENST00000420869 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
TRIM49D1-201ENST00000420869 SAMD9LQ8IVG5 1584 aa12.32□□□□□ -0.44
TRIM49D1-201ENST00000420869 CDK11AQ9UQ88 783 aaPredicted RBP12.32□□□□□ -0.44
TRIM49D1-201ENST00000420869 E9PCH4 1651 aa12.32□□□□□ -0.44
TRIM49D1-201ENST00000420869 ANP32CO43423 234 aa12.32□□□□□ -0.44
TRIM49D1-201ENST00000420869 MAST1Q9Y2H9 1570 aa12.31□□□□□ -0.44
TRIM49D1-201ENST00000420869 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
TRIM49D1-201ENST00000420869 UNC13BO14795 1591 aa12.3□□□□□ -0.44
TRIM49D1-201ENST00000420869 ZNF644Q9H582 1327 aaPredicted RBP12.3□□□□□ -0.44
TRIM49D1-201ENST00000420869 ATP10BO94823 1461 aa12.3□□□□□ -0.44
TRIM49D1-201ENST00000420869 TRIM52Q96A61 297 aa12.29□□□□□ -0.44
TRIM49D1-201ENST00000420869 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
TRIM49D1-201ENST00000420869 ARHGEF12Q9NZN5 1544 aa12.28□□□□□ -0.44
TRIM49D1-201ENST00000420869 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
TRIM49D1-201ENST00000420869 ARID3CA6NKF2 412 aa12.28□□□□□ -0.44
TRIM49D1-201ENST00000420869 PLXNC1O60486 1568 aa12.27□□□□□ -0.44
TRIM49D1-201ENST00000420869 HSPA5P11021 654 aaKnown RBP12.27□□□□□ -0.45
TRIM49D1-201ENST00000420869 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
TRIM49D1-201ENST00000420869 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
TRIM49D1-201ENST00000420869 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
TRIM49D1-201ENST00000420869 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
TRIM49D1-201ENST00000420869 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
TRIM49D1-201ENST00000420869 ANKRD30AQ9BXX3 1397 aa12.25□□□□□ -0.45
TRIM49D1-201ENST00000420869 PTPRGP23470 1445 aa12.25□□□□□ -0.45
TRIM49D1-201ENST00000420869 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
TRIM49D1-201ENST00000420869 IQGAP3Q86VI3 1631 aa12.24□□□□□ -0.45
TRIM49D1-201ENST00000420869 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM49D1-201ENST00000420869 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
TRIM49D1-201ENST00000420869 LAMC1P11047 1609 aa12.24□□□□□ -0.45
TRIM49D1-201ENST00000420869 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
TRIM49D1-201ENST00000420869 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
TRIM49D1-201ENST00000420869 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
TRIM49D1-201ENST00000420869 CFDP1Q9UEE9 299 aaPredicted RBP12.22□□□□□ -0.45
TRIM49D1-201ENST00000420869 FOXD1Q16676 465 aa12.22□□□□□ -0.45
TRIM49D1-201ENST00000420869 NBPF8Q3BBV2 869 aa12.21□□□□□ -0.45
TRIM49D1-201ENST00000420869 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.46
TRIM49D1-201ENST00000420869 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
TRIM49D1-201ENST00000420869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIM49D1-201ENST00000420869 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
TRIM49D1-201ENST00000420869 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
TRIM49D1-201ENST00000420869 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
TRIM49D1-201ENST00000420869 FAM135AQ9P2D6 1515 aa12.18□□□□□ -0.46
TRIM49D1-201ENST00000420869 RNF17Q9BXT8 1623 aaKnown RBP12.17□□□□□ -0.46
TRIM49D1-201ENST00000420869 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
TRIM49D1-201ENST00000420869 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
TRIM49D1-201ENST00000420869 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
TRIM49D1-201ENST00000420869 CEP152O94986 1710 aa12.16□□□□□ -0.46
TRIM49D1-201ENST00000420869 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
TRIM49D1-201ENST00000420869 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
TRIM49D1-201ENST00000420869 KIF7Q2M1P5 1343 aa12.14□□□□□ -0.47
TRIM49D1-201ENST00000420869 EIF2AK4Q9P2K8 1649 aaKnown RBP12.14□□□□□ -0.47
TRIM49D1-201ENST00000420869 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
TRIM49D1-201ENST00000420869 FBLN2P98095 1184 aa12.13□□□□□ -0.47
TRIM49D1-201ENST00000420869 FKBP8Q14318 412 aa12.13□□□□□ -0.47
TRIM49D1-201ENST00000420869 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
TRIM49D1-201ENST00000420869 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
TRIM49D1-201ENST00000420869 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
TRIM49D1-201ENST00000420869 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
TRIM49D1-201ENST00000420869 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
TRIM49D1-201ENST00000420869 ARHGAP5Q13017 1502 aa12.12□□□□□ -0.47
TRIM49D1-201ENST00000420869 USP47Q96K76 1375 aa12.12□□□□□ -0.47
TRIM49D1-201ENST00000420869 ABCC1P33527 1531 aa12.12□□□□□ -0.47
TRIM49D1-201ENST00000420869 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
TRIM49D1-201ENST00000420869 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
TRIM49D1-201ENST00000420869 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
TRIM49D1-201ENST00000420869 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
TRIM49D1-201ENST00000420869 PKD2Q13563 968 aa12.1□□□□□ -0.47
TRIM49D1-201ENST00000420869 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
TRIM49D1-201ENST00000420869 ARAP3Q8WWN8 1544 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms