RNA–Protein interactions for RNA: ENST00000419073.1

LST1-215, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-215ENST00000419073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.8■■□□□ 1.72
LST1-215ENST00000419073 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
LST1-215ENST00000419073 FER1L4A9Z1Z3 1794 aa25.79■■□□□ 1.72
LST1-215ENST00000419073 CSRNP3Q8WYN3 585 aa25.78■■□□□ 1.72
LST1-215ENST00000419073 HECW1Q76N89 1606 aa25.77■■□□□ 1.72
LST1-215ENST00000419073 ATP10AO60312 1499 aa25.77■■□□□ 1.72
LST1-215ENST00000419073 SPATA31D1Q6ZQQ2 1576 aa25.76■■□□□ 1.71
LST1-215ENST00000419073 ARHGEF12Q9NZN5 1544 aa25.74■■□□□ 1.71
LST1-215ENST00000419073 UHRF1BP1Q6BDS2 1440 aa25.74■■□□□ 1.71
LST1-215ENST00000419073 PREX1Q8TCU6 1659 aa25.74■■□□□ 1.71
LST1-215ENST00000419073 C9orf84Q5VXU9 1444 aa25.72■■□□□ 1.71
LST1-215ENST00000419073 EFCAB2Q5VUJ9 269 aa25.7■■□□□ 1.7
LST1-215ENST00000419073 MYT1LQ9UL68 1186 aa25.7■■□□□ 1.7
LST1-215ENST00000419073 PLCH2O75038 1416 aa25.7■■□□□ 1.7
LST1-215ENST00000419073 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
LST1-215ENST00000419073 PTPRTO14522 1441 aa25.67■■□□□ 1.7
LST1-215ENST00000419073 ESF1Q9H501 851 aaKnown RBP25.64■■□□□ 1.7
LST1-215ENST00000419073 ATP1B4Q9UN42 357 aaPredicted RBP25.62■■□□□ 1.69
LST1-215ENST00000419073 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
LST1-215ENST00000419073 SETD1BQ9UPS6 1966 aaKnown RBP25.57■■□□□ 1.68
LST1-215ENST00000419073 CDK13Q14004 1512 aaKnown RBP25.57■■□□□ 1.68
LST1-215ENST00000419073 CDK11AQ9UQ88 783 aaPredicted RBP25.54■■□□□ 1.68
LST1-215ENST00000419073 LTBP4Q8N2S1 1624 aa25.54■■□□□ 1.68
LST1-215ENST00000419073 IQSEC2Q5JU85 1478 aa25.53■■□□□ 1.68
LST1-215ENST00000419073 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
LST1-215ENST00000419073 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
LST1-215ENST00000419073 TRAPPC8Q9Y2L5 1435 aa25.52■■□□□ 1.68
LST1-215ENST00000419073 NCOA1Q15788 1441 aa25.46■■□□□ 1.67
LST1-215ENST00000419073 ARHGAP5Q13017 1502 aa25.44■■□□□ 1.66
LST1-215ENST00000419073 NCKAP5LQ9HCH0 1330 aa25.42■■□□□ 1.66
LST1-215ENST00000419073 MYO5CQ9NQX4 1742 aa25.42■■□□□ 1.66
LST1-215ENST00000419073 C3P01024 1663 aa25.42■■□□□ 1.66
LST1-215ENST00000419073 ZNF335Q9H4Z2 1342 aaPredicted RBP25.41■■□□□ 1.66
LST1-215ENST00000419073 KDM5CP41229 1560 aa25.41■■□□□ 1.66
LST1-215ENST00000419073 DIP2CQ9Y2E4 1556 aa25.41■■□□□ 1.66
LST1-215ENST00000419073 EEA1Q15075 1411 aa25.39■■□□□ 1.66
LST1-215ENST00000419073 MLH3Q9UHC1 1453 aa25.38■■□□□ 1.65
LST1-215ENST00000419073 REREQ9P2R6 1566 aa25.38■■□□□ 1.65
LST1-215ENST00000419073 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
LST1-215ENST00000419073 CAMSAP1Q5T5Y3 1602 aa25.35■■□□□ 1.65
LST1-215ENST00000419073 AGLP35573 1532 aa25.35■■□□□ 1.65
LST1-215ENST00000419073 KIF14Q15058 1648 aa25.34■■□□□ 1.65
LST1-215ENST00000419073 CLIP1P30622 1438 aa25.34■■□□□ 1.65
LST1-215ENST00000419073 TROQ12816 1431 aaPredicted RBP25.34■■□□□ 1.65
LST1-215ENST00000419073 FMN1Q68DA7 1419 aa25.34■■□□□ 1.65
LST1-215ENST00000419073 ABCA6Q8N139 1617 aa25.32■■□□□ 1.64
LST1-215ENST00000419073 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
LST1-215ENST00000419073 PKD2Q13563 968 aa25.31■■□□□ 1.64
LST1-215ENST00000419073 EHMT2Q96KQ7 1210 aa25.31■■□□□ 1.64
LST1-215ENST00000419073 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
LST1-215ENST00000419073 NPATQ14207 1427 aa25.3■■□□□ 1.64
LST1-215ENST00000419073 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
LST1-215ENST00000419073 HSPA1LP34931 641 aa25.27■■□□□ 1.64
LST1-215ENST00000419073 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
LST1-215ENST00000419073 PPP6R1Q9UPN7 881 aa25.23■■□□□ 1.63
LST1-215ENST00000419073 TOM1O60784 492 aa25.2■■□□□ 1.62
LST1-215ENST00000419073 ZNF777Q9ULD5 760 aaPredicted RBP25.2■■□□□ 1.62
LST1-215ENST00000419073 ABCC1P33527 1531 aa25.18■■□□□ 1.62
LST1-215ENST00000419073 PLA2R1Q13018 1463 aa25.18■■□□□ 1.62
LST1-215ENST00000419073 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
LST1-215ENST00000419073 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
LST1-215ENST00000419073 SPAG9O60271 1321 aaKnown RBP25.16■■□□□ 1.62
LST1-215ENST00000419073 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
LST1-215ENST00000419073 GGT6Q6P531 493 aa25.15■■□□□ 1.62
LST1-215ENST00000419073 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
LST1-215ENST00000419073 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
LST1-215ENST00000419073 MED1Q15648 1581 aaPredicted RBP25.14■■□□□ 1.62
LST1-215ENST00000419073 MROH2AA6NES4 1674 aa25.13■■□□□ 1.61
LST1-215ENST00000419073 ITSN2Q9NZM3 1697 aa25.11■■□□□ 1.61
LST1-215ENST00000419073 HNRNPMP52272 730 aaKnown RBP eCLIP25.11■■□□□ 1.61
LST1-215ENST00000419073 PTPRKQ15262 1439 aa25.11■■□□□ 1.61
LST1-215ENST00000419073 PREX2Q70Z35 1606 aa25.1■■□□□ 1.61
LST1-215ENST00000419073 CEP170BQ9Y4F5 1589 aaPredicted RBP25.09■■□□□ 1.61
LST1-215ENST00000419073 SAMD9LQ8IVG5 1584 aa25.07■■□□□ 1.6
LST1-215ENST00000419073 MYO3AQ8NEV4 1616 aa25.07■■□□□ 1.6
LST1-215ENST00000419073 CLTCQ00610 1675 aaKnown RBP25.04■■□□□ 1.6
LST1-215ENST00000419073 SUPT6HQ7KZ85 1726 aaKnown RBP25.04■■□□□ 1.6
LST1-215ENST00000419073 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
LST1-215ENST00000419073 A2MP01023 1474 aa25.02■■□□□ 1.6
LST1-215ENST00000419073 CPS1P31327 1500 aa25.01■■□□□ 1.59
LST1-215ENST00000419073 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
LST1-215ENST00000419073 A2ML1A8K2U0 1454 aa25■■□□□ 1.59
LST1-215ENST00000419073 CCDC18Q5T9S5 1454 aa25■■□□□ 1.59
LST1-215ENST00000419073 SHANK2Q9UPX8 1470 aa25■■□□□ 1.59
LST1-215ENST00000419073 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
LST1-215ENST00000419073 SYCP2Q9BX26 1530 aa24.98■■□□□ 1.59
LST1-215ENST00000419073 ANKLE2Q86XL3 938 aa24.97■■□□□ 1.59
LST1-215ENST00000419073 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
LST1-215ENST00000419073 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
LST1-215ENST00000419073 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
LST1-215ENST00000419073 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.58
LST1-215ENST00000419073 GPATCH8Q9UKJ3 1502 aaKnown RBP24.94■■□□□ 1.58
LST1-215ENST00000419073 KIAA1107Q9UPP5 1409 aa24.94■■□□□ 1.58
LST1-215ENST00000419073 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
LST1-215ENST00000419073 DNMT1P26358 1616 aaKnown RBP24.93■■□□□ 1.58
LST1-215ENST00000419073 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
LST1-215ENST00000419073 PLEKHH2Q8IVE3 1493 aa24.9■■□□□ 1.58
LST1-215ENST00000419073 THEMISQ8N1K5 641 aaPredicted RBP24.9■■□□□ 1.58
LST1-215ENST00000419073 TNRQ92752 1358 aa24.9■■□□□ 1.58
LST1-215ENST00000419073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms