RNA–Protein interactions for RNA: ENST00000418217.1

GTF2B-202, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-202ENST00000418217 POTEB3A0JP26 581 aa10.76□□□□□ -0.69
GTF2B-202ENST00000418217 DCAF8Q5TAQ9 597 aa10.76□□□□□ -0.69
GTF2B-202ENST00000418217 POTEBQ6S5H4 581 aa10.76□□□□□ -0.69
GTF2B-202ENST00000418217 ARHGEF11O15085 1522 aa10.75□□□□□ -0.69
GTF2B-202ENST00000418217 HS3ST6Q96QI5 342 aa10.75□□□□□ -0.69
GTF2B-202ENST00000418217 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
GTF2B-202ENST00000418217 PDCD7Q8N8D1 485 aaKnown RBP10.74□□□□□ -0.69
GTF2B-202ENST00000418217 FAM205CA6NFA0 338 aa10.73□□□□□ -0.69
GTF2B-202ENST00000418217 FANCD2Q9BXW9 1451 aa10.73□□□□□ -0.69
GTF2B-202ENST00000418217 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
GTF2B-202ENST00000418217 WDR62O43379 1518 aa10.7□□□□□ -0.7
GTF2B-202ENST00000418217 L3MBTL3Q96JM7 780 aaPredicted RBP10.7□□□□□ -0.7
GTF2B-202ENST00000418217 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
GTF2B-202ENST00000418217 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
GTF2B-202ENST00000418217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.71
GTF2B-202ENST00000418217 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
GTF2B-202ENST00000418217 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
GTF2B-202ENST00000418217 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
GTF2B-202ENST00000418217 PRDM2Q13029 1718 aa10.57□□□□□ -0.72
GTF2B-202ENST00000418217 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
GTF2B-202ENST00000418217 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
GTF2B-202ENST00000418217 HOXB3P14651 431 aaPredicted RBP10.54□□□□□ -0.72
GTF2B-202ENST00000418217 PSEN1P49768 467 aa10.54□□□□□ -0.72
GTF2B-202ENST00000418217 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
GTF2B-202ENST00000418217 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
GTF2B-202ENST00000418217 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
GTF2B-202ENST00000418217 GSE1Q14687 1217 aa10.52□□□□□ -0.73
GTF2B-202ENST00000418217 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
GTF2B-202ENST00000418217 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
GTF2B-202ENST00000418217 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
GTF2B-202ENST00000418217 CUX1P39880 1505 aa10.49□□□□□ -0.73
GTF2B-202ENST00000418217 FKBP8Q14318 412 aa10.49□□□□□ -0.73
GTF2B-202ENST00000418217 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
GTF2B-202ENST00000418217 ERBB3P21860 1342 aa10.49□□□□□ -0.73
GTF2B-202ENST00000418217 CHRM1P11229 460 aaPredicted RBP10.48□□□□□ -0.73
GTF2B-202ENST00000418217 BOLA1Q9Y3E2 137 aa10.48□□□□□ -0.73
GTF2B-202ENST00000418217 SOGA1O94964 1423 aa10.48□□□□□ -0.73
GTF2B-202ENST00000418217 POLA1P09884 1462 aaPredicted RBP10.48□□□□□ -0.73
GTF2B-202ENST00000418217 G3V3G9 751 aa10.47□□□□□ -0.73
GTF2B-202ENST00000418217 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
GTF2B-202ENST00000418217 DOK7Q18PE1 504 aa10.44□□□□□ -0.74
GTF2B-202ENST00000418217 KLHL34Q8N239 644 aa10.44□□□□□ -0.74
GTF2B-202ENST00000418217 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
GTF2B-202ENST00000418217 TOP2BQ02880 1626 aa10.43□□□□□ -0.74
GTF2B-202ENST00000418217 PDAP1Q13442 181 aaKnown RBP10.42□□□□□ -0.74
GTF2B-202ENST00000418217 FBXO41Q8TF61 875 aa10.42□□□□□ -0.74
GTF2B-202ENST00000418217 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
GTF2B-202ENST00000418217 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
GTF2B-202ENST00000418217 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
GTF2B-202ENST00000418217 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
GTF2B-202ENST00000418217 VARS2Q5ST30 1063 aaKnown RBP10.41□□□□□ -0.74
GTF2B-202ENST00000418217 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.75
GTF2B-202ENST00000418217 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
GTF2B-202ENST00000418217 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
GTF2B-202ENST00000418217 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
GTF2B-202ENST00000418217 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
GTF2B-202ENST00000418217 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
GTF2B-202ENST00000418217 TARBP1Q13395 1621 aaKnown RBP10.37□□□□□ -0.75
GTF2B-202ENST00000418217 RIMBP2O15034 1052 aa10.37□□□□□ -0.75
GTF2B-202ENST00000418217 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
GTF2B-202ENST00000418217 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
GTF2B-202ENST00000418217 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
GTF2B-202ENST00000418217 CHD1O14646 1710 aa10.34□□□□□ -0.75
GTF2B-202ENST00000418217 LMTK3Q96Q04 1460 aa10.34□□□□□ -0.75
GTF2B-202ENST00000418217 GRIN2BQ13224 1484 aa10.33□□□□□ -0.76
GTF2B-202ENST00000418217 GAPVD1Q14C86 1478 aa10.33□□□□□ -0.76
GTF2B-202ENST00000418217 EIF4G3O43432 1585 aaKnown RBP10.33□□□□□ -0.76
GTF2B-202ENST00000418217 SOCS7O14512 581 aa10.32□□□□□ -0.76
GTF2B-202ENST00000418217 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
GTF2B-202ENST00000418217 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
GTF2B-202ENST00000418217 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
GTF2B-202ENST00000418217 PTGER2P43116 358 aa10.29□□□□□ -0.76
GTF2B-202ENST00000418217 ZSWIM6Q9HCJ5 1215 aa10.29□□□□□ -0.76
GTF2B-202ENST00000418217 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
GTF2B-202ENST00000418217 MAGI1Q96QZ7 1491 aaPredicted RBP10.29□□□□□ -0.76
GTF2B-202ENST00000418217 HRCP23327 699 aa10.28□□□□□ -0.76
GTF2B-202ENST00000418217 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
GTF2B-202ENST00000418217 SNAPC4Q5SXM2 1469 aa10.28□□□□□ -0.76
GTF2B-202ENST00000418217 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
GTF2B-202ENST00000418217 FAM69CQ0P6D2 419 aa10.26□□□□□ -0.77
GTF2B-202ENST00000418217 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
GTF2B-202ENST00000418217 ERICH3Q5RHP9 1530 aa10.26□□□□□ -0.77
GTF2B-202ENST00000418217 SYNJ2O15056 1496 aa10.24□□□□□ -0.77
GTF2B-202ENST00000418217 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
GTF2B-202ENST00000418217 IGF1RP08069 1367 aa10.24□□□□□ -0.77
GTF2B-202ENST00000418217 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
GTF2B-202ENST00000418217 EFCAB3Q8N7B9 438 aa10.23□□□□□ -0.77
GTF2B-202ENST00000418217 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
GTF2B-202ENST00000418217 MICALL2Q8IY33 904 aa10.22□□□□□ -0.77
GTF2B-202ENST00000418217 EEA1Q15075 1411 aa10.22□□□□□ -0.77
GTF2B-202ENST00000418217 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
GTF2B-202ENST00000418217 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
GTF2B-202ENST00000418217 PCGF6Q9BYE7 350 aa10.19□□□□□ -0.78
GTF2B-202ENST00000418217 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
GTF2B-202ENST00000418217 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
GTF2B-202ENST00000418217 CLASP1Q7Z460 1538 aa10.18□□□□□ -0.78
GTF2B-202ENST00000418217 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
GTF2B-202ENST00000418217 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
GTF2B-202ENST00000418217 RUSC2Q8N2Y8 1516 aa10.17□□□□□ -0.78
GTF2B-202ENST00000418217 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms