RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 TSPY10P0CW01 314 aa15.31■□□□□ 0.04
SCN4B-202ENST00000415030 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
SCN4B-202ENST00000415030 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
SCN4B-202ENST00000415030 FOXD1Q16676 465 aa15.3■□□□□ 0.04
SCN4B-202ENST00000415030 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
SCN4B-202ENST00000415030 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
SCN4B-202ENST00000415030 KIF7Q2M1P5 1343 aa15.29■□□□□ 0.04
SCN4B-202ENST00000415030 RALBP1Q15311 655 aa15.29■□□□□ 0.04
SCN4B-202ENST00000415030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCN4B-202ENST00000415030 ARID4BQ4LE39 1312 aaPredicted RBP15.28■□□□□ 0.04
SCN4B-202ENST00000415030 CFAP43Q8NDM7 1665 aa15.28■□□□□ 0.04
SCN4B-202ENST00000415030 RCAN3Q9UKA8 241 aa15.27■□□□□ 0.04
SCN4B-202ENST00000415030 PDE3BQ13370 1112 aa15.27■□□□□ 0.04
SCN4B-202ENST00000415030 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
SCN4B-202ENST00000415030 EHBP1L1Q8N3D4 1523 aa15.26■□□□□ 0.03
SCN4B-202ENST00000415030 CCDC184Q52MB2 194 aa15.26■□□□□ 0.03
SCN4B-202ENST00000415030 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
SCN4B-202ENST00000415030 MS4A1P11836 297 aa15.25■□□□□ 0.03
SCN4B-202ENST00000415030 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
SCN4B-202ENST00000415030 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
SCN4B-202ENST00000415030 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
SCN4B-202ENST00000415030 NCOA1Q15788 1441 aa15.23■□□□□ 0.03
SCN4B-202ENST00000415030 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
SCN4B-202ENST00000415030 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
SCN4B-202ENST00000415030 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
SCN4B-202ENST00000415030 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
SCN4B-202ENST00000415030 PDE4AP27815 886 aa15.22■□□□□ 0.03
SCN4B-202ENST00000415030 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
SCN4B-202ENST00000415030 SUPT6HQ7KZ85 1726 aaKnown RBP15.21■□□□□ 0.03
SCN4B-202ENST00000415030 USP47Q96K76 1375 aa15.21■□□□□ 0.02
SCN4B-202ENST00000415030 MYBBP1AQ9BQG0 1328 aaKnown RBP15.2■□□□□ 0.02
SCN4B-202ENST00000415030 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
SCN4B-202ENST00000415030 AKNAQ7Z591 1439 aa15.19■□□□□ 0.02
SCN4B-202ENST00000415030 MIA2Q96PC5 1412 aa15.19■□□□□ 0.02
SCN4B-202ENST00000415030 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
SCN4B-202ENST00000415030 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCN4B-202ENST00000415030 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
SCN4B-202ENST00000415030 PKD2Q13563 968 aa15.17■□□□□ 0.02
SCN4B-202ENST00000415030 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
SCN4B-202ENST00000415030 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
SCN4B-202ENST00000415030 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
SCN4B-202ENST00000415030 EXOC6Q8TAG9 804 aa15.16■□□□□ 0.02
SCN4B-202ENST00000415030 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
SCN4B-202ENST00000415030 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
SCN4B-202ENST00000415030 CUL7Q14999 1698 aa15.15■□□□□ 0.02
SCN4B-202ENST00000415030 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
SCN4B-202ENST00000415030 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
SCN4B-202ENST00000415030 C11orf95C9JLR9 678 aaPredicted RBP15.14■□□□□ 0.01
SCN4B-202ENST00000415030 BECN1Q14457 450 aa15.13■□□□□ 0.01
SCN4B-202ENST00000415030 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
SCN4B-202ENST00000415030 ANKRD30AQ9BXX3 1397 aa15.12■□□□□ 0.01
SCN4B-202ENST00000415030 PNISRQ8TF01 805 aaKnown RBP15.12■□□□□ 0.01
SCN4B-202ENST00000415030 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
SCN4B-202ENST00000415030 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
SCN4B-202ENST00000415030 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
SCN4B-202ENST00000415030 ANKRD30BQ9BXX2 1392 aa15.1■□□□□ 0.01
SCN4B-202ENST00000415030 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
SCN4B-202ENST00000415030 DCAF11Q8TEB1 546 aa15.1■□□□□ 0.01
SCN4B-202ENST00000415030 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
SCN4B-202ENST00000415030 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
SCN4B-202ENST00000415030 GSE1Q14687 1217 aa15.1■□□□□ 0.01
SCN4B-202ENST00000415030 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
SCN4B-202ENST00000415030 GLIPR1L2Q4G1C9 344 aa15.09■□□□□ 0.01
SCN4B-202ENST00000415030 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
SCN4B-202ENST00000415030 BACH2Q9BYV9 841 aa15.08■□□□□ 0
SCN4B-202ENST00000415030 TOPBP1Q92547 1522 aa15.08■□□□□ 0
SCN4B-202ENST00000415030 OSCARQ8IYS5 282 aa15.07■□□□□ 0
SCN4B-202ENST00000415030 HECW1Q76N89 1606 aa15.06■□□□□ 0
SCN4B-202ENST00000415030 NUP155O75694 1391 aa15.06■□□□□ 0
SCN4B-202ENST00000415030 ST20-MTHFSA0A0A6YYL1 179 aa15.06■□□□□ 0
SCN4B-202ENST00000415030 SNAPC4Q5SXM2 1469 aa15.05■□□□□ 0
SCN4B-202ENST00000415030 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ 0
SCN4B-202ENST00000415030 CDCA8Q53HL2 280 aa15.05■□□□□ -0
SCN4B-202ENST00000415030 CENPQQ7L2Z9 268 aaPredicted RBP15.05■□□□□ -0
SCN4B-202ENST00000415030 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
SCN4B-202ENST00000415030 TMF1P82094 1093 aa15.04■□□□□ -0
SCN4B-202ENST00000415030 GRIN2BQ13224 1484 aa15.04■□□□□ -0
SCN4B-202ENST00000415030 UGGT2Q9NYU1 1516 aa15.04■□□□□ -0
SCN4B-202ENST00000415030 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
SCN4B-202ENST00000415030 RGS3P49796 1198 aa15.03■□□□□ -0
SCN4B-202ENST00000415030 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
SCN4B-202ENST00000415030 DAPK1P53355 1430 aa15.03■□□□□ -0
SCN4B-202ENST00000415030 FAM161AQ3B820 660 aa15.02■□□□□ -0
SCN4B-202ENST00000415030 KIAA1107Q9UPP5 1409 aa15.02□□□□□ -0.01
SCN4B-202ENST00000415030 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
SCN4B-202ENST00000415030 MLECQ14165 292 aa15.01□□□□□ -0.01
SCN4B-202ENST00000415030 IL27Q8NEV9 243 aa15.01□□□□□ -0.01
SCN4B-202ENST00000415030 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
SCN4B-202ENST00000415030 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
SCN4B-202ENST00000415030 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
SCN4B-202ENST00000415030 PRKCSHP14314 528 aaPredicted RBP15□□□□□ -0.01
SCN4B-202ENST00000415030 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
SCN4B-202ENST00000415030 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
SCN4B-202ENST00000415030 EPRSP07814 1512 aaKnown RBP15□□□□□ -0.01
SCN4B-202ENST00000415030 CTTNBP2Q8WZ74 1663 aa14.99□□□□□ -0.01
SCN4B-202ENST00000415030 NFKBIBQ15653 356 aa14.98□□□□□ -0.01
SCN4B-202ENST00000415030 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
SCN4B-202ENST00000415030 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
SCN4B-202ENST00000415030 PRDM2Q13029 1718 aa14.96□□□□□ -0.01
SCN4B-202ENST00000415030 PLIN1O60240 522 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms