RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 ZNF579Q8NAF0 562 aaKnown RBP6.01□□□□□ -1.45
CLHC1-201ENST00000401408 ABCC8Q09428 1581 aa6□□□□□ -1.45
CLHC1-201ENST00000401408 GAPVD1Q14C86 1478 aa6□□□□□ -1.45
CLHC1-201ENST00000401408 DNMBPQ6XZF7 1577 aa6□□□□□ -1.45
CLHC1-201ENST00000401408 METRNQ9UJH8 293 aa5.99□□□□□ -1.45
CLHC1-201ENST00000401408 SYNJ1O43426 1573 aa5.99□□□□□ -1.45
CLHC1-201ENST00000401408 WDR97A6NE52 1622 aa5.98□□□□□ -1.45
CLHC1-201ENST00000401408 BRD2P25440 801 aaKnown RBP5.98□□□□□ -1.45
CLHC1-201ENST00000401408 ARID3AQ99856 593 aa5.98□□□□□ -1.45
CLHC1-201ENST00000401408 NPM1P06748 294 aaKnown RBP eCLIP5.97□□□□□ -1.45
CLHC1-201ENST00000401408 PKD2Q13563 968 aa5.97□□□□□ -1.45
CLHC1-201ENST00000401408 TOP2AP11388 1531 aaKnown RBP5.96□□□□□ -1.45
CLHC1-201ENST00000401408 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.45
CLHC1-201ENST00000401408 SNAPC4Q5SXM2 1469 aa5.95□□□□□ -1.46
CLHC1-201ENST00000401408 MAGI1Q96QZ7 1491 aaPredicted RBP5.95□□□□□ -1.46
CLHC1-201ENST00000401408 SPRYD3Q8NCJ5 442 aa5.95□□□□□ -1.46
CLHC1-201ENST00000401408 ERCC6L2Q5T890 1561 aa5.95□□□□□ -1.46
CLHC1-201ENST00000401408 DHX37Q8IY37 1157 aaKnown RBP5.95□□□□□ -1.46
CLHC1-201ENST00000401408 PUS7Q96PZ0 661 aaKnown RBP5.94□□□□□ -1.46
CLHC1-201ENST00000401408 SYNJ2O15056 1496 aa5.93□□□□□ -1.46
CLHC1-201ENST00000401408 ST18O60284 1047 aa5.93□□□□□ -1.46
CLHC1-201ENST00000401408 PDE4CQ08493 712 aa5.93□□□□□ -1.46
CLHC1-201ENST00000401408 SHROOM2Q13796 1616 aa5.92□□□□□ -1.46
CLHC1-201ENST00000401408 HECW2Q9P2P5 1572 aa5.92□□□□□ -1.46
CLHC1-201ENST00000401408 RAD54L2Q9Y4B4 1467 aa5.91□□□□□ -1.46
CLHC1-201ENST00000401408 C7P10643 843 aa5.91□□□□□ -1.46
CLHC1-201ENST00000401408 BRPF1P55201 1214 aaPredicted RBP5.91□□□□□ -1.46
CLHC1-201ENST00000401408 FARP1Q9Y4F1 1045 aaPredicted RBP5.91□□□□□ -1.46
CLHC1-201ENST00000401408 TDRD9Q8NDG6 1382 aaKnown RBP5.91□□□□□ -1.46
CLHC1-201ENST00000401408 TAF7LQ5H9L4 462 aa5.91□□□□□ -1.46
CLHC1-201ENST00000401408 NECTIN2Q92692 538 aa5.91□□□□□ -1.46
CLHC1-201ENST00000401408 ZRANB1Q9UGI0 708 aa5.91□□□□□ -1.46
CLHC1-201ENST00000401408 ABCC10Q5T3U5 1492 aa5.9□□□□□ -1.46
CLHC1-201ENST00000401408 FAM9AQ8IZU1 332 aaPredicted RBP5.9□□□□□ -1.46
CLHC1-201ENST00000401408 SLC39A7Q92504 469 aa5.9□□□□□ -1.47
CLHC1-201ENST00000401408 RSPH6AQ9H0K4 717 aa5.9□□□□□ -1.47
CLHC1-201ENST00000401408 CEP170Q5SW79 1584 aa5.9□□□□□ -1.47
CLHC1-201ENST00000401408 DIP2BQ9P265 1576 aa5.9□□□□□ -1.47
CLHC1-201ENST00000401408 CCDC88BA6NC98 1476 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 GRIN2BQ13224 1484 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 ZMYND15Q9H091 742 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 KDM6BO15054 1643 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 MAPKBP1O60336 1514 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 FBXO41Q8TF61 875 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 POLR3GLQ9BT43 218 aa5.89□□□□□ -1.47
CLHC1-201ENST00000401408 SOGA1O94964 1423 aa5.88□□□□□ -1.47
CLHC1-201ENST00000401408 PBRM1Q86U86 1689 aa5.88□□□□□ -1.47
CLHC1-201ENST00000401408 CHMP7Q8WUX9 453 aaPredicted RBP5.88□□□□□ -1.47
CLHC1-201ENST00000401408 NEFLP07196 543 aa5.87□□□□□ -1.47
CLHC1-201ENST00000401408 NUP160Q12769 1436 aa5.87□□□□□ -1.47
CLHC1-201ENST00000401408 SPDYE2BA6NHP3 402 aa5.86□□□□□ -1.47
CLHC1-201ENST00000401408 SPDYE6P0CI01 402 aa5.86□□□□□ -1.47
CLHC1-201ENST00000401408 SPDYE2Q495Y8 402 aa5.86□□□□□ -1.47
CLHC1-201ENST00000401408 ADGRL1O94910 1474 aa5.86□□□□□ -1.47
CLHC1-201ENST00000401408 PRR29P0C7W0 189 aa5.84□□□□□ -1.47
CLHC1-201ENST00000401408 FGD5Q6ZNL6 1462 aa5.84□□□□□ -1.47
CLHC1-201ENST00000401408 ABCA5Q8WWZ7 1642 aa5.84□□□□□ -1.47
CLHC1-201ENST00000401408 PPRC1Q5VV67 1664 aaKnown RBP5.84□□□□□ -1.47
CLHC1-201ENST00000401408 IFNLR1Q8IU57 520 aaPredicted RBP5.84□□□□□ -1.47
CLHC1-201ENST00000401408 C1orf115Q9H7X2 142 aa5.84□□□□□ -1.47
CLHC1-201ENST00000401408 GRIN2AQ12879 1464 aa5.84□□□□□ -1.48
CLHC1-201ENST00000401408 ATXN8OSP0DMR3 200 aa5.83□□□□□ -1.48
CLHC1-201ENST00000401408 VASPP50552 380 aaPredicted RBP5.83□□□□□ -1.48
CLHC1-201ENST00000401408 KCTD17Q8N5Z5 321 aa5.83□□□□□ -1.48
CLHC1-201ENST00000401408 RAD21O60216 631 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 ASTLQ6HA08 431 aaPredicted RBP5.82□□□□□ -1.48
CLHC1-201ENST00000401408 CUX1P39880 1505 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 LMTK3Q96Q04 1460 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 ADCY10Q96PN6 1610 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 TSPOAP1O95153 1857 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 FAM69CQ0P6D2 419 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 NEUROD2Q15784 382 aa5.82□□□□□ -1.48
CLHC1-201ENST00000401408 SOCS7O14512 581 aa5.81□□□□□ -1.48
CLHC1-201ENST00000401408 ADAMTS12P58397 1594 aa5.8□□□□□ -1.48
CLHC1-201ENST00000401408 ABCA10Q8WWZ4 1543 aa5.8□□□□□ -1.48
CLHC1-201ENST00000401408 COL17A1Q9UMD9 1497 aaPredicted RBP5.79□□□□□ -1.48
CLHC1-201ENST00000401408 ATMINO43313 823 aaPredicted RBP5.79□□□□□ -1.48
CLHC1-201ENST00000401408 ILDR2Q71H61 639 aa5.79□□□□□ -1.48
CLHC1-201ENST00000401408 ECM2O94769 699 aaPredicted RBP5.78□□□□□ -1.48
CLHC1-201ENST00000401408 RGS22Q8NE09 1264 aa5.78□□□□□ -1.48
CLHC1-201ENST00000401408 RBM25P49756 843 aaKnown RBP5.78□□□□□ -1.48
CLHC1-201ENST00000401408 GLI2P10070 1586 aa5.78□□□□□ -1.48
CLHC1-201ENST00000401408 ARID3CA6NKF2 412 aa5.77□□□□□ -1.49
CLHC1-201ENST00000401408 ZNF428Q96B54 188 aa5.77□□□□□ -1.49
CLHC1-201ENST00000401408 BCCIPQ9P287 314 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLHC1-201ENST00000401408 MTMR7Q9Y216 660 aa5.77□□□□□ -1.49
CLHC1-201ENST00000401408 PRG4Q92954 1404 aaPredicted RBP5.76□□□□□ -1.49
CLHC1-201ENST00000401408 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
CLHC1-201ENST00000401408 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
CLHC1-201ENST00000401408 POTEFA5A3E0 1075 aa5.75□□□□□ -1.49
CLHC1-201ENST00000401408 PHF12Q96QT6 1004 aa5.75□□□□□ -1.49
CLHC1-201ENST00000401408 APBB1O00213 710 aa5.74□□□□□ -1.49
CLHC1-201ENST00000401408 TOP2BQ02880 1626 aa5.74□□□□□ -1.49
CLHC1-201ENST00000401408 RUSC2Q8N2Y8 1516 aa5.74□□□□□ -1.49
CLHC1-201ENST00000401408 FHAD1B1AJZ9 1412 aa5.74□□□□□ -1.49
CLHC1-201ENST00000401408 FOXD4L5Q5VV16 416 aaPredicted RBP5.74□□□□□ -1.49
CLHC1-201ENST00000401408 FOXD4L4Q8WXT5 416 aaPredicted RBP5.74□□□□□ -1.49
CLHC1-201ENST00000401408 MAP3K4Q9Y6R4 1608 aa5.73□□□□□ -1.49
CLHC1-201ENST00000401408 TMEM121BQ9BXQ6 578 aaPredicted RBP5.73□□□□□ -1.49
CLHC1-201ENST00000401408 BCL11BQ9C0K0 894 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms