RNA–Protein interactions for RNA: ENST00000400246.5

DEPDC5-204, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-204ENST00000400246 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
DEPDC5-204ENST00000400246 PCF11O94913 1555 aaKnown RBP12.48□□□□□ -0.41
DEPDC5-204ENST00000400246 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
DEPDC5-204ENST00000400246 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
DEPDC5-204ENST00000400246 PLIN1O60240 522 aa12.48□□□□□ -0.41
DEPDC5-204ENST00000400246 PEG3Q9GZU2 1588 aa12.48□□□□□ -0.41
DEPDC5-204ENST00000400246 ZNF644Q9H582 1327 aaPredicted RBP12.47□□□□□ -0.41
DEPDC5-204ENST00000400246 NAIPQ13075 1403 aa12.47□□□□□ -0.41
DEPDC5-204ENST00000400246 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
DEPDC5-204ENST00000400246 ARXQ96QS3 562 aa12.45□□□□□ -0.42
DEPDC5-204ENST00000400246 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
DEPDC5-204ENST00000400246 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
DEPDC5-204ENST00000400246 CFTRP13569 1480 aa12.44□□□□□ -0.42
DEPDC5-204ENST00000400246 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
DEPDC5-204ENST00000400246 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
DEPDC5-204ENST00000400246 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
DEPDC5-204ENST00000400246 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
DEPDC5-204ENST00000400246 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
DEPDC5-204ENST00000400246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
DEPDC5-204ENST00000400246 FANCD2Q9BXW9 1451 aa12.41□□□□□ -0.42
DEPDC5-204ENST00000400246 PKD2Q13563 968 aa12.41□□□□□ -0.42
DEPDC5-204ENST00000400246 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
DEPDC5-204ENST00000400246 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
DEPDC5-204ENST00000400246 PDE4AP27815 886 aa12.4□□□□□ -0.42
DEPDC5-204ENST00000400246 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
DEPDC5-204ENST00000400246 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
DEPDC5-204ENST00000400246 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
DEPDC5-204ENST00000400246 HSP90AA1P07900 732 aaKnown RBP12.39□□□□□ -0.43
DEPDC5-204ENST00000400246 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
DEPDC5-204ENST00000400246 RGS3P49796 1198 aa12.39□□□□□ -0.43
DEPDC5-204ENST00000400246 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
DEPDC5-204ENST00000400246 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
DEPDC5-204ENST00000400246 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
DEPDC5-204ENST00000400246 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
DEPDC5-204ENST00000400246 HMGXB3Q12766 1538 aa12.36□□□□□ -0.43
DEPDC5-204ENST00000400246 RRP1P56182 461 aaKnown RBP12.36□□□□□ -0.43
DEPDC5-204ENST00000400246 FYCO1Q9BQS8 1478 aa12.36□□□□□ -0.43
DEPDC5-204ENST00000400246 TSPY4P0CV99 314 aa12.35□□□□□ -0.43
DEPDC5-204ENST00000400246 TSPY10P0CW01 314 aa12.35□□□□□ -0.43
DEPDC5-204ENST00000400246 USP47Q96K76 1375 aa12.35□□□□□ -0.43
DEPDC5-204ENST00000400246 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
DEPDC5-204ENST00000400246 PNISRQ8TF01 805 aaKnown RBP12.35□□□□□ -0.43
DEPDC5-204ENST00000400246 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
DEPDC5-204ENST00000400246 MAP3K1Q13233 1512 aa12.34□□□□□ -0.43
DEPDC5-204ENST00000400246 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.43
DEPDC5-204ENST00000400246 NCOA1Q15788 1441 aa12.32□□□□□ -0.44
DEPDC5-204ENST00000400246 ANP32BQ92688 251 aaKnown RBP12.32□□□□□ -0.44
DEPDC5-204ENST00000400246 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
DEPDC5-204ENST00000400246 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
DEPDC5-204ENST00000400246 CC2D2AQ9P2K1 1620 aa12.31□□□□□ -0.44
DEPDC5-204ENST00000400246 UPF2Q9HAU5 1272 aaKnown RBP12.3□□□□□ -0.44
DEPDC5-204ENST00000400246 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
DEPDC5-204ENST00000400246 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
DEPDC5-204ENST00000400246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
DEPDC5-204ENST00000400246 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
DEPDC5-204ENST00000400246 NESP48681 1621 aa12.29□□□□□ -0.44
DEPDC5-204ENST00000400246 NPHP1O15259 732 aa12.27□□□□□ -0.44
DEPDC5-204ENST00000400246 BACH2Q9BYV9 841 aa12.27□□□□□ -0.45
DEPDC5-204ENST00000400246 ANKRD30BQ9BXX2 1392 aa12.26□□□□□ -0.45
DEPDC5-204ENST00000400246 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
DEPDC5-204ENST00000400246 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
DEPDC5-204ENST00000400246 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
DEPDC5-204ENST00000400246 NUP155O75694 1391 aa12.25□□□□□ -0.45
DEPDC5-204ENST00000400246 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
DEPDC5-204ENST00000400246 MYBBP1AQ9BQG0 1328 aaKnown RBP12.24□□□□□ -0.45
DEPDC5-204ENST00000400246 NFKBIBQ15653 356 aa12.24□□□□□ -0.45
DEPDC5-204ENST00000400246 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
DEPDC5-204ENST00000400246 GLIPR1L2Q4G1C9 344 aa12.24□□□□□ -0.45
DEPDC5-204ENST00000400246 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
DEPDC5-204ENST00000400246 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
DEPDC5-204ENST00000400246 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
DEPDC5-204ENST00000400246 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
DEPDC5-204ENST00000400246 GSE1Q14687 1217 aa12.22□□□□□ -0.45
DEPDC5-204ENST00000400246 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
DEPDC5-204ENST00000400246 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
DEPDC5-204ENST00000400246 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
DEPDC5-204ENST00000400246 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
DEPDC5-204ENST00000400246 KIF15Q9NS87 1388 aa12.21□□□□□ -0.45
DEPDC5-204ENST00000400246 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.46
DEPDC5-204ENST00000400246 RALBP1Q15311 655 aa12.21□□□□□ -0.46
DEPDC5-204ENST00000400246 KDM6BO15054 1643 aa12.21□□□□□ -0.46
DEPDC5-204ENST00000400246 KTN1Q86UP2 1357 aaKnown RBP12.2□□□□□ -0.46
DEPDC5-204ENST00000400246 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
DEPDC5-204ENST00000400246 PANK3Q9H999 370 aa12.2□□□□□ -0.46
DEPDC5-204ENST00000400246 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
DEPDC5-204ENST00000400246 EFCAB5A4FU69 1503 aa12.19□□□□□ -0.46
DEPDC5-204ENST00000400246 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.46
DEPDC5-204ENST00000400246 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
DEPDC5-204ENST00000400246 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
DEPDC5-204ENST00000400246 GAPVD1Q14C86 1478 aa12.18□□□□□ -0.46
DEPDC5-204ENST00000400246 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
DEPDC5-204ENST00000400246 RPRD2Q5VT52 1461 aaKnown RBP12.18□□□□□ -0.46
DEPDC5-204ENST00000400246 DENND4BO75064 1496 aaPredicted RBP12.17□□□□□ -0.46
DEPDC5-204ENST00000400246 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms