RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
HLA-DQB1-204ENST00000399084 PTPRGP23470 1445 aa25.34■■□□□ 1.65
HLA-DQB1-204ENST00000399084 ATP10BO94823 1461 aa25.33■■□□□ 1.65
HLA-DQB1-204ENST00000399084 KIF14Q15058 1648 aa25.31■■□□□ 1.64
HLA-DQB1-204ENST00000399084 CAMSAP2Q08AD1 1489 aa25.31■■□□□ 1.64
HLA-DQB1-204ENST00000399084 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
HLA-DQB1-204ENST00000399084 ADGRL2O95490 1459 aa25.29■■□□□ 1.64
HLA-DQB1-204ENST00000399084 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
HLA-DQB1-204ENST00000399084 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
HLA-DQB1-204ENST00000399084 CHD1O14646 1710 aa25.27■■□□□ 1.64
HLA-DQB1-204ENST00000399084 MPHOSPH9Q99550 1183 aa25.27■■□□□ 1.64
HLA-DQB1-204ENST00000399084 ABCC10Q5T3U5 1492 aa25.26■■□□□ 1.63
HLA-DQB1-204ENST00000399084 ADGBQ8N7X0 1667 aa25.25■■□□□ 1.63
HLA-DQB1-204ENST00000399084 NCOA1Q15788 1441 aa25.24■■□□□ 1.63
HLA-DQB1-204ENST00000399084 ZNF644Q9H582 1327 aaPredicted RBP25.23■■□□□ 1.63
HLA-DQB1-204ENST00000399084 SHANK2Q9UPX8 1470 aa25.22■■□□□ 1.63
HLA-DQB1-204ENST00000399084 KDM6BO15054 1643 aa25.22■■□□□ 1.63
HLA-DQB1-204ENST00000399084 ANKRD30AQ9BXX3 1397 aa25.22■■□□□ 1.63
HLA-DQB1-204ENST00000399084 DENND4BO75064 1496 aaPredicted RBP25.21■■□□□ 1.63
HLA-DQB1-204ENST00000399084 CROCC2H7BZ55 1655 aa25.21■■□□□ 1.63
HLA-DQB1-204ENST00000399084 RSPH4AQ5TD94 716 aa25.19■■□□□ 1.62
HLA-DQB1-204ENST00000399084 CDC42BPAQ5VT25 1732 aa25.19■■□□□ 1.62
HLA-DQB1-204ENST00000399084 ANKRD30BQ9BXX2 1392 aa25.15■■□□□ 1.62
HLA-DQB1-204ENST00000399084 KDM5BQ9UGL1 1544 aa25.14■■□□□ 1.62
HLA-DQB1-204ENST00000399084 ARHGEF5Q12774 1597 aa25.14■■□□□ 1.61
HLA-DQB1-204ENST00000399084 RPRD2Q5VT52 1461 aaKnown RBP25.11■■□□□ 1.61
HLA-DQB1-204ENST00000399084 TSPY4P0CV99 314 aa25.09■■□□□ 1.61
HLA-DQB1-204ENST00000399084 TSPY10P0CW01 314 aa25.09■■□□□ 1.61
HLA-DQB1-204ENST00000399084 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
HLA-DQB1-204ENST00000399084 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
HLA-DQB1-204ENST00000399084 ABCC2Q92887 1545 aa25.08■■□□□ 1.61
HLA-DQB1-204ENST00000399084 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
HLA-DQB1-204ENST00000399084 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
HLA-DQB1-204ENST00000399084 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
HLA-DQB1-204ENST00000399084 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
HLA-DQB1-204ENST00000399084 C9orf84Q5VXU9 1444 aa25.04■■□□□ 1.6
HLA-DQB1-204ENST00000399084 PREX2Q70Z35 1606 aa25.04■■□□□ 1.6
HLA-DQB1-204ENST00000399084 PZPP20742 1482 aa25.03■■□□□ 1.6
HLA-DQB1-204ENST00000399084 GTF3C3Q9Y5Q9 886 aa25.02■■□□□ 1.6
HLA-DQB1-204ENST00000399084 PLEKHH2Q8IVE3 1493 aa25.01■■□□□ 1.59
HLA-DQB1-204ENST00000399084 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
HLA-DQB1-204ENST00000399084 MBD5Q9P267 1494 aa25.01■■□□□ 1.59
HLA-DQB1-204ENST00000399084 KIAA1107Q9UPP5 1409 aa25■■□□□ 1.59
HLA-DQB1-204ENST00000399084 KDM5DQ9BY66 1539 aa24.99■■□□□ 1.59
HLA-DQB1-204ENST00000399084 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
HLA-DQB1-204ENST00000399084 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
HLA-DQB1-204ENST00000399084 CCER2I3L3R5 266 aa24.98■■□□□ 1.59
HLA-DQB1-204ENST00000399084 CDC42BPBQ9Y5S2 1711 aa24.97■■□□□ 1.59
HLA-DQB1-204ENST00000399084 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.59
HLA-DQB1-204ENST00000399084 MAST1Q9Y2H9 1570 aa24.94■■□□□ 1.58
HLA-DQB1-204ENST00000399084 TEX14Q8IWB6 1497 aa24.94■■□□□ 1.58
HLA-DQB1-204ENST00000399084 SAMD9LQ8IVG5 1584 aa24.93■■□□□ 1.58
HLA-DQB1-204ENST00000399084 ANP32CO43423 234 aa24.92■■□□□ 1.58
HLA-DQB1-204ENST00000399084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.58
HLA-DQB1-204ENST00000399084 KIF15Q9NS87 1388 aa24.91■■□□□ 1.58
HLA-DQB1-204ENST00000399084 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.57
HLA-DQB1-204ENST00000399084 HNRNPMP52272 730 aaKnown RBP eCLIP24.88■■□□□ 1.57
HLA-DQB1-204ENST00000399084 FOXD1Q16676 465 aa24.88■■□□□ 1.57
HLA-DQB1-204ENST00000399084 MYO5CQ9NQX4 1742 aa24.88■■□□□ 1.57
HLA-DQB1-204ENST00000399084 ARHGAP5Q13017 1502 aa24.87■■□□□ 1.57
HLA-DQB1-204ENST00000399084 NUP155O75694 1391 aa24.87■■□□□ 1.57
HLA-DQB1-204ENST00000399084 PKD2Q13563 968 aa24.86■■□□□ 1.57
HLA-DQB1-204ENST00000399084 HSPA5P11021 654 aaKnown RBP24.85■■□□□ 1.57
HLA-DQB1-204ENST00000399084 PLCH2O75038 1416 aa24.85■■□□□ 1.57
HLA-DQB1-204ENST00000399084 TTC37Q6PGP7 1564 aa24.84■■□□□ 1.57
HLA-DQB1-204ENST00000399084 ARAP3Q8WWN8 1544 aa24.83■■□□□ 1.57
HLA-DQB1-204ENST00000399084 ZCCHC11Q5TAX3 1644 aaKnown RBP24.82■■□□□ 1.56
HLA-DQB1-204ENST00000399084 PLXNC1O60486 1568 aa24.81■■□□□ 1.56
HLA-DQB1-204ENST00000399084 HIRIP3Q9BW71 556 aaPredicted RBP24.81■■□□□ 1.56
HLA-DQB1-204ENST00000399084 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
HLA-DQB1-204ENST00000399084 ARHGEF12Q9NZN5 1544 aa24.79■■□□□ 1.56
HLA-DQB1-204ENST00000399084 SYCP2Q9BX26 1530 aa24.78■■□□□ 1.56
HLA-DQB1-204ENST00000399084 UHRF1BP1Q6BDS2 1440 aa24.77■■□□□ 1.56
HLA-DQB1-204ENST00000399084 NBPF8Q3BBV2 869 aa24.76■■□□□ 1.55
HLA-DQB1-204ENST00000399084 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
HLA-DQB1-204ENST00000399084 WASHC2AQ641Q2 1341 aa24.74■■□□□ 1.55
HLA-DQB1-204ENST00000399084 DUOX2Q9NRD8 1548 aa24.73■■□□□ 1.55
HLA-DQB1-204ENST00000399084 UNC13BO14795 1591 aa24.73■■□□□ 1.55
HLA-DQB1-204ENST00000399084 ARID4BQ4LE39 1312 aaPredicted RBP24.72■■□□□ 1.55
HLA-DQB1-204ENST00000399084 FAM135AQ9P2D6 1515 aa24.71■■□□□ 1.55
HLA-DQB1-204ENST00000399084 ERBINQ96RT1 1412 aa24.71■■□□□ 1.55
HLA-DQB1-204ENST00000399084 POLR1AO95602 1720 aaPredicted RBP24.69■■□□□ 1.54
HLA-DQB1-204ENST00000399084 RTEL1-TNFRSF6BF6WH68 1400 aa24.69■■□□□ 1.54
HLA-DQB1-204ENST00000399084 CCDC7Q96M83 1385 aa24.69■■□□□ 1.54
HLA-DQB1-204ENST00000399084 KCNH8Q96L42 1107 aa24.69■■□□□ 1.54
HLA-DQB1-204ENST00000399084 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
HLA-DQB1-204ENST00000399084 ABCC1P33527 1531 aa24.67■■□□□ 1.54
HLA-DQB1-204ENST00000399084 PELP1Q8IZL8 1130 aaKnown RBP24.66■■□□□ 1.54
HLA-DQB1-204ENST00000399084 WDR7Q9Y4E6 1490 aa24.64■■□□□ 1.54
HLA-DQB1-204ENST00000399084 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.53
HLA-DQB1-204ENST00000399084 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.53
HLA-DQB1-204ENST00000399084 IQGAP3Q86VI3 1631 aa24.64■■□□□ 1.53
HLA-DQB1-204ENST00000399084 OSCARQ8IYS5 282 aa24.64■■□□□ 1.53
HLA-DQB1-204ENST00000399084 ATP10AO60312 1499 aa24.62■■□□□ 1.53
HLA-DQB1-204ENST00000399084 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
HLA-DQB1-204ENST00000399084 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
HLA-DQB1-204ENST00000399084 USP47Q96K76 1375 aa24.56■■□□□ 1.52
HLA-DQB1-204ENST00000399084 KDM5CP41229 1560 aa24.54■■□□□ 1.52
HLA-DQB1-204ENST00000399084 KIF7Q2M1P5 1343 aa24.54■■□□□ 1.52
HLA-DQB1-204ENST00000399084 ROCK2O75116 1388 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms