RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PTPRGP23470 1445 aa18.53■□□□□ 0.56
PCDHGA11-201ENST00000398587 RALBP1Q15311 655 aa18.52■□□□□ 0.56
PCDHGA11-201ENST00000398587 SRPK2P78362 688 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-201ENST00000398587 U2SURPO15042 1029 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-201ENST00000398587 MLECQ14165 292 aa18.51■□□□□ 0.55
PCDHGA11-201ENST00000398587 MORC1Q86VD1 984 aa18.51■□□□□ 0.55
PCDHGA11-201ENST00000398587 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
PCDHGA11-201ENST00000398587 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
PCDHGA11-201ENST00000398587 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
PCDHGA11-201ENST00000398587 BECN1Q14457 450 aa18.49■□□□□ 0.55
PCDHGA11-201ENST00000398587 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
PCDHGA11-201ENST00000398587 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
PCDHGA11-201ENST00000398587 MS4A1P11836 297 aa18.47■□□□□ 0.55
PCDHGA11-201ENST00000398587 FRAT1Q92837 279 aaPredicted RBP18.47■□□□□ 0.55
PCDHGA11-201ENST00000398587 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
PCDHGA11-201ENST00000398587 FGD6Q6ZV73 1430 aa18.45■□□□□ 0.54
PCDHGA11-201ENST00000398587 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDHGA11-201ENST00000398587 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
PCDHGA11-201ENST00000398587 ERICH6BQ5W0A0 696 aa18.44■□□□□ 0.54
PCDHGA11-201ENST00000398587 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
PCDHGA11-201ENST00000398587 MYOM3Q5VTT5 1437 aa18.43■□□□□ 0.54
PCDHGA11-201ENST00000398587 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-201ENST00000398587 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
PCDHGA11-201ENST00000398587 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
PCDHGA11-201ENST00000398587 STK26Q9P289 416 aa18.42■□□□□ 0.54
PCDHGA11-201ENST00000398587 CASKIN1Q8WXD9 1431 aa18.42■□□□□ 0.54
PCDHGA11-201ENST00000398587 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
PCDHGA11-201ENST00000398587 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.54
PCDHGA11-201ENST00000398587 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
PCDHGA11-201ENST00000398587 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
PCDHGA11-201ENST00000398587 CUX1P39880 1505 aa18.4■□□□□ 0.54
PCDHGA11-201ENST00000398587 RGS3P49796 1198 aa18.4■□□□□ 0.54
PCDHGA11-201ENST00000398587 HDGFL2Q7Z4V5 671 aaPredicted RBP18.39■□□□□ 0.53
PCDHGA11-201ENST00000398587 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
PCDHGA11-201ENST00000398587 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
PCDHGA11-201ENST00000398587 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
PCDHGA11-201ENST00000398587 WASHC2CQ9Y4E1 1318 aa18.37■□□□□ 0.53
PCDHGA11-201ENST00000398587 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
PCDHGA11-201ENST00000398587 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
PCDHGA11-201ENST00000398587 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
PCDHGA11-201ENST00000398587 HAP1P54257 671 aaPredicted RBP18.35■□□□□ 0.53
PCDHGA11-201ENST00000398587 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
PCDHGA11-201ENST00000398587 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
PCDHGA11-201ENST00000398587 UACAQ9BZF9 1416 aa18.33■□□□□ 0.53
PCDHGA11-201ENST00000398587 A0A0G2JS52 829 aa18.33■□□□□ 0.52
PCDHGA11-201ENST00000398587 FYCO1Q9BQS8 1478 aa18.32■□□□□ 0.52
PCDHGA11-201ENST00000398587 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
PCDHGA11-201ENST00000398587 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
PCDHGA11-201ENST00000398587 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
PCDHGA11-201ENST00000398587 NESP48681 1621 aa18.31■□□□□ 0.52
PCDHGA11-201ENST00000398587 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
PCDHGA11-201ENST00000398587 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
PCDHGA11-201ENST00000398587 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
PCDHGA11-201ENST00000398587 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
PCDHGA11-201ENST00000398587 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
PCDHGA11-201ENST00000398587 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
PCDHGA11-201ENST00000398587 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
PCDHGA11-201ENST00000398587 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
PCDHGA11-201ENST00000398587 USP47Q96K76 1375 aa18.28■□□□□ 0.52
PCDHGA11-201ENST00000398587 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
PCDHGA11-201ENST00000398587 ARXQ96QS3 562 aa18.27■□□□□ 0.52
PCDHGA11-201ENST00000398587 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
PCDHGA11-201ENST00000398587 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.51
PCDHGA11-201ENST00000398587 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.51
PCDHGA11-201ENST00000398587 SOX12O15370 315 aa18.26■□□□□ 0.51
PCDHGA11-201ENST00000398587 GOLGA6L22H0YM25 854 aa18.26■□□□□ 0.51
PCDHGA11-201ENST00000398587 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
PCDHGA11-201ENST00000398587 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
PCDHGA11-201ENST00000398587 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
PCDHGA11-201ENST00000398587 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
PCDHGA11-201ENST00000398587 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
PCDHGA11-201ENST00000398587 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
PCDHGA11-201ENST00000398587 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
PCDHGA11-201ENST00000398587 PANK3Q9H999 370 aa18.22■□□□□ 0.51
PCDHGA11-201ENST00000398587 TRAK1Q9UPV9 953 aa18.22■□□□□ 0.51
PCDHGA11-201ENST00000398587 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
PCDHGA11-201ENST00000398587 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
PCDHGA11-201ENST00000398587 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
PCDHGA11-201ENST00000398587 RTF1Q92541 710 aaKnown RBP18.2■□□□□ 0.5
PCDHGA11-201ENST00000398587 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA11-201ENST00000398587 NUTM2DQ5VT03 806 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA11-201ENST00000398587 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
PCDHGA11-201ENST00000398587 NCLP19338 710 aaKnown RBP18.19■□□□□ 0.5
PCDHGA11-201ENST00000398587 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
PCDHGA11-201ENST00000398587 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
PCDHGA11-201ENST00000398587 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
PCDHGA11-201ENST00000398587 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
PCDHGA11-201ENST00000398587 EID1Q9Y6B2 187 aa18.15■□□□□ 0.5
PCDHGA11-201ENST00000398587 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
PCDHGA11-201ENST00000398587 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 RWDD1Q9H446 243 aaPredicted RBP18.13■□□□□ 0.49
PCDHGA11-201ENST00000398587 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
PCDHGA11-201ENST00000398587 EHBP1L1Q8N3D4 1523 aa18.12■□□□□ 0.49
PCDHGA11-201ENST00000398587 EVC2Q86UK5 1308 aa18.1■□□□□ 0.49
PCDHGA11-201ENST00000398587 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms