RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 L3MBTL2Q969R5 705 aa6.92□□□□□ -1.3
SSR1-202ENST00000397511 MPHOSPH9Q99550 1183 aa6.92□□□□□ -1.3
SSR1-202ENST00000397511 UACAQ9BZF9 1416 aa6.92□□□□□ -1.3
SSR1-202ENST00000397511 KIF21AQ7Z4S6 1674 aa6.92□□□□□ -1.3
SSR1-202ENST00000397511 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
SSR1-202ENST00000397511 PTPN23Q9H3S7 1636 aa6.91□□□□□ -1.3
SSR1-202ENST00000397511 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
SSR1-202ENST00000397511 C11orf95C9JLR9 678 aaPredicted RBP6.91□□□□□ -1.3
SSR1-202ENST00000397511 GRIN2BQ13224 1484 aa6.9□□□□□ -1.3
SSR1-202ENST00000397511 SLC4A1APQ9BWU0 796 aaKnown RBP6.9□□□□□ -1.3
SSR1-202ENST00000397511 MRC2Q9UBG0 1479 aa6.9□□□□□ -1.31
SSR1-202ENST00000397511 KDM6BO15054 1643 aa6.9□□□□□ -1.31
SSR1-202ENST00000397511 EIF4G2P78344 907 aaKnown RBP eCLIP6.89□□□□□ -1.31
SSR1-202ENST00000397511 SUPT6HQ7KZ85 1726 aaKnown RBP6.89□□□□□ -1.31
SSR1-202ENST00000397511 ABCA5Q8WWZ7 1642 aa6.89□□□□□ -1.31
SSR1-202ENST00000397511 ZNF608Q9ULD9 1512 aaPredicted RBP6.89□□□□□ -1.31
SSR1-202ENST00000397511 CCDC136Q96JN2 1154 aa6.89□□□□□ -1.31
SSR1-202ENST00000397511 WDR62O43379 1518 aa6.89□□□□□ -1.31
SSR1-202ENST00000397511 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
SSR1-202ENST00000397511 NBPF8Q3BBV2 869 aa6.88□□□□□ -1.31
SSR1-202ENST00000397511 HOMEZQ8IX15 550 aa6.88□□□□□ -1.31
SSR1-202ENST00000397511 SAMD9Q5K651 1589 aa6.88□□□□□ -1.31
SSR1-202ENST00000397511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.88□□□□□ -1.31
SSR1-202ENST00000397511 EPRSP07814 1512 aaKnown RBP6.88□□□□□ -1.31
SSR1-202ENST00000397511 THOC2Q8NI27 1593 aaKnown RBP6.87□□□□□ -1.31
SSR1-202ENST00000397511 TAOK2Q9UL54 1235 aa6.87□□□□□ -1.31
SSR1-202ENST00000397511 TARBP1Q13395 1621 aaKnown RBP6.87□□□□□ -1.31
SSR1-202ENST00000397511 CHMP7Q8WUX9 453 aaPredicted RBP6.87□□□□□ -1.31
SSR1-202ENST00000397511 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
SSR1-202ENST00000397511 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
SSR1-202ENST00000397511 CFDP1Q9UEE9 299 aaPredicted RBP6.86□□□□□ -1.31
SSR1-202ENST00000397511 KDM2AQ9Y2K7 1162 aa6.86□□□□□ -1.31
SSR1-202ENST00000397511 DENND4BO75064 1496 aaPredicted RBP6.86□□□□□ -1.31
SSR1-202ENST00000397511 UGGT2Q9NYU1 1516 aa6.86□□□□□ -1.31
SSR1-202ENST00000397511 EIF5BO60841 1220 aaKnown RBP6.86□□□□□ -1.31
SSR1-202ENST00000397511 IQGAP2Q13576 1575 aa6.85□□□□□ -1.31
SSR1-202ENST00000397511 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
SSR1-202ENST00000397511 TULP1O00294 542 aaPredicted RBP6.84□□□□□ -1.31
SSR1-202ENST00000397511 NBR1Q14596 966 aa6.84□□□□□ -1.31
SSR1-202ENST00000397511 RTL5Q5HYW3 569 aaPredicted RBP6.84□□□□□ -1.31
SSR1-202ENST00000397511 PRG4Q92954 1404 aaPredicted RBP6.84□□□□□ -1.31
SSR1-202ENST00000397511 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.31
SSR1-202ENST00000397511 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
SSR1-202ENST00000397511 KDM5BQ9UGL1 1544 aa6.83□□□□□ -1.32
SSR1-202ENST00000397511 PRKRIP1Q9H875 184 aaPredicted RBP6.83□□□□□ -1.32
SSR1-202ENST00000397511 HECW1Q76N89 1606 aa6.83□□□□□ -1.32
SSR1-202ENST00000397511 PBRM1Q86U86 1689 aa6.83□□□□□ -1.32
SSR1-202ENST00000397511 PKD2Q13563 968 aa6.82□□□□□ -1.32
SSR1-202ENST00000397511 KLHL34Q8N239 644 aa6.82□□□□□ -1.32
SSR1-202ENST00000397511 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
SSR1-202ENST00000397511 PLB1Q6P1J6 1458 aa6.82□□□□□ -1.32
SSR1-202ENST00000397511 DAPK1P53355 1430 aa6.82□□□□□ -1.32
SSR1-202ENST00000397511 CACNB1Q02641 598 aaPredicted RBP6.82□□□□□ -1.32
SSR1-202ENST00000397511 KIF7Q2M1P5 1343 aa6.81□□□□□ -1.32
SSR1-202ENST00000397511 ABCC5O15440 1437 aa6.81□□□□□ -1.32
SSR1-202ENST00000397511 IL27Q8NEV9 243 aa6.81□□□□□ -1.32
SSR1-202ENST00000397511 ERCC6Q03468 1493 aa6.8□□□□□ -1.32
SSR1-202ENST00000397511 CCDC7Q96M83 1385 aa6.8□□□□□ -1.32
SSR1-202ENST00000397511 HNRNPMP52272 730 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSR1-202ENST00000397511 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
SSR1-202ENST00000397511 ARHGEF11O15085 1522 aa6.8□□□□□ -1.32
SSR1-202ENST00000397511 ADAMTS12P58397 1594 aa6.8□□□□□ -1.32
SSR1-202ENST00000397511 NUP153P49790 1475 aaKnown RBP6.8□□□□□ -1.32
SSR1-202ENST00000397511 ANKRD30BQ9BXX2 1392 aa6.8□□□□□ -1.32
SSR1-202ENST00000397511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.8□□□□□ -1.321e-10■■■□□ 14.7
SSR1-202ENST00000397511 JPH4Q96JJ6 628 aa6.79□□□□□ -1.32
SSR1-202ENST00000397511 DISP1Q96F81 1524 aa6.79□□□□□ -1.32
SSR1-202ENST00000397511 TCOF1Q13428 1488 aaKnown RBP6.79□□□□□ -1.32
SSR1-202ENST00000397511 MIA2Q96PC5 1412 aa6.78□□□□□ -1.32
SSR1-202ENST00000397511 CNTLNQ9NXG0 1405 aa6.78□□□□□ -1.32
SSR1-202ENST00000397511 MAPK8IP2Q13387 824 aaPredicted RBP6.78□□□□□ -1.32
SSR1-202ENST00000397511 PLEKHD1A6NEE1 506 aa6.78□□□□□ -1.32
SSR1-202ENST00000397511 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
SSR1-202ENST00000397511 PKNOX2Q96KN3 472 aa6.78□□□□□ -1.32
SSR1-202ENST00000397511 CARD11Q9BXL7 1154 aa6.77□□□□□ -1.33
SSR1-202ENST00000397511 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.33
SSR1-202ENST00000397511 NUP155O75694 1391 aa6.77□□□□□ -1.33
SSR1-202ENST00000397511 RPRD2Q5VT52 1461 aaKnown RBP6.77□□□□□ -1.33
SSR1-202ENST00000397511 KIAA0586Q9BVV6 1533 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 KIAA0556O60303 1618 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 TSPY4P0CV99 314 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 TSPY10P0CW01 314 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 PPP4R2Q9NY27 417 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 GRIN2AQ12879 1464 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 ST20-MTHFSA0A0A6YYL1 179 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 PAK3O75914 559 aaPredicted RBP6.76□□□□□ -1.33
SSR1-202ENST00000397511 USP47Q96K76 1375 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 NCOA1Q15788 1441 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 CAMSAP2Q08AD1 1489 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 KIF14Q15058 1648 aa6.76□□□□□ -1.33
SSR1-202ENST00000397511 MAGI1Q96QZ7 1491 aaPredicted RBP6.75□□□□□ -1.33
SSR1-202ENST00000397511 TMC1Q8TDI8 760 aa6.75□□□□□ -1.33
SSR1-202ENST00000397511 RAPGEF6Q8TEU7 1601 aa6.75□□□□□ -1.33
SSR1-202ENST00000397511 AKNAQ7Z591 1439 aa6.75□□□□□ -1.33
SSR1-202ENST00000397511 ANP32AP39687 249 aaKnown RBP6.74□□□□□ -1.33
SSR1-202ENST00000397511 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
SSR1-202ENST00000397511 TEX14Q8IWB6 1497 aa6.74□□□□□ -1.33
SSR1-202ENST00000397511 GPATCH8Q9UKJ3 1502 aaKnown RBP6.74□□□□□ -1.33
SSR1-202ENST00000397511 TROQ12816 1431 aaPredicted RBP6.74□□□□□ -1.33
SSR1-202ENST00000397511 DNMT1P26358 1616 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms