RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 KCNH8Q96L42 1107 aa7.05□□□□□ -1.28
FGD4-201ENST00000395740 LAMC3Q9Y6N6 1575 aa7.05□□□□□ -1.28
FGD4-201ENST00000395740 NAIPQ13075 1403 aa7.05□□□□□ -1.28
FGD4-201ENST00000395740 MYOM3Q5VTT5 1437 aa7.05□□□□□ -1.28
FGD4-201ENST00000395740 TDRD9Q8NDG6 1382 aaKnown RBP7.05□□□□□ -1.28
FGD4-201ENST00000395740 UGGT2Q9NYU1 1516 aa7.04□□□□□ -1.28
FGD4-201ENST00000395740 GRIN2BQ13224 1484 aa7.04□□□□□ -1.28
FGD4-201ENST00000395740 SIN3AQ96ST3 1273 aa7.04□□□□□ -1.28
FGD4-201ENST00000395740 PDS5BQ9NTI5 1447 aa7.04□□□□□ -1.28
FGD4-201ENST00000395740 CDK11AQ9UQ88 783 aaPredicted RBP7.03□□□□□ -1.28
FGD4-201ENST00000395740 MIA2Q96PC5 1412 aa7.02□□□□□ -1.29
FGD4-201ENST00000395740 FAM50AQ14320 339 aaKnown RBP7.02□□□□□ -1.29
FGD4-201ENST00000395740 PPP4R2Q9NY27 417 aa7.02□□□□□ -1.29
FGD4-201ENST00000395740 CNTLNQ9NXG0 1405 aa7.02□□□□□ -1.29
FGD4-201ENST00000395740 FHOD3Q2V2M9 1422 aa7□□□□□ -1.29
FGD4-201ENST00000395740 ITGAEP38570 1179 aa7□□□□□ -1.29
FGD4-201ENST00000395740 NCOA1Q15788 1441 aa7□□□□□ -1.29
FGD4-201ENST00000395740 P3H3Q8IVL6 736 aa7□□□□□ -1.29
FGD4-201ENST00000395740 PTPRKQ15262 1439 aa6.99□□□□□ -1.29
FGD4-201ENST00000395740 MTUS2Q5JR59 1369 aa6.99□□□□□ -1.29
FGD4-201ENST00000395740 ZBED9Q6R2W3 1325 aa6.99□□□□□ -1.29
FGD4-201ENST00000395740 ROCK1Q13464 1354 aa6.98□□□□□ -1.29
FGD4-201ENST00000395740 ARID4BQ4LE39 1312 aaPredicted RBP6.98□□□□□ -1.29
FGD4-201ENST00000395740 BCANQ96GW7 911 aa6.97□□□□□ -1.29
FGD4-201ENST00000395740 SLC34A2O95436 690 aa6.97□□□□□ -1.29
FGD4-201ENST00000395740 DENND4BO75064 1496 aaPredicted RBP6.97□□□□□ -1.29
FGD4-201ENST00000395740 DISP3Q9P2K9 1392 aa6.97□□□□□ -1.29
FGD4-201ENST00000395740 EIF4G2P78344 907 aaKnown RBP eCLIP6.96□□□□□ -1.29
FGD4-201ENST00000395740 TRIM52Q96A61 297 aa6.96□□□□□ -1.29
FGD4-201ENST00000395740 RPRD2Q5VT52 1461 aaKnown RBP6.96□□□□□ -1.3
FGD4-201ENST00000395740 RNF123Q5XPI4 1314 aa6.96□□□□□ -1.3
FGD4-201ENST00000395740 WASHC2AQ641Q2 1341 aa6.95□□□□□ -1.3
FGD4-201ENST00000395740 CCDC7Q96M83 1385 aa6.95□□□□□ -1.3
FGD4-201ENST00000395740 SPATA31E1Q6ZUB1 1445 aa6.95□□□□□ -1.3
FGD4-201ENST00000395740 SMG6Q86US8 1419 aaKnown RBP6.95□□□□□ -1.3
FGD4-201ENST00000395740 HNRNPUQ00839 825 aaKnown RBP eCLIP6.95□□□□□ -1.3
FGD4-201ENST00000395740 DNMT1P26358 1616 aaKnown RBP6.95□□□□□ -1.3
FGD4-201ENST00000395740 ZNF608Q9ULD9 1512 aaPredicted RBP6.95□□□□□ -1.3
FGD4-201ENST00000395740 ERCC6Q03468 1493 aa6.94□□□□□ -1.3
FGD4-201ENST00000395740 GAPVD1Q14C86 1478 aa6.94□□□□□ -1.3
FGD4-201ENST00000395740 MRC2Q9UBG0 1479 aa6.94□□□□□ -1.3
FGD4-201ENST00000395740 HSPA5P11021 654 aaKnown RBP6.94□□□□□ -1.3
FGD4-201ENST00000395740 PRKRIP1Q9H875 184 aaPredicted RBP6.94□□□□□ -1.3
FGD4-201ENST00000395740 TEX14Q8IWB6 1497 aa6.93□□□□□ -1.3
FGD4-201ENST00000395740 ADGBQ8N7X0 1667 aa6.93□□□□□ -1.3
FGD4-201ENST00000395740 KTN1Q86UP2 1357 aaKnown RBP6.93□□□□□ -1.3
FGD4-201ENST00000395740 TARBP1Q13395 1621 aaKnown RBP6.92□□□□□ -1.3
FGD4-201ENST00000395740 MAGI3Q5TCQ9 1506 aa6.92□□□□□ -1.3
FGD4-201ENST00000395740 ANKRD30BQ9BXX2 1392 aa6.92□□□□□ -1.3
FGD4-201ENST00000395740 ATP1B4Q9UN42 357 aaPredicted RBP6.92□□□□□ -1.3
FGD4-201ENST00000395740 WDR62O43379 1518 aa6.92□□□□□ -1.3
FGD4-201ENST00000395740 PBRM1Q86U86 1689 aa6.92□□□□□ -1.3
FGD4-201ENST00000395740 KIF14Q15058 1648 aa6.91□□□□□ -1.3
FGD4-201ENST00000395740 ROCK2O75116 1388 aaKnown RBP6.91□□□□□ -1.3
FGD4-201ENST00000395740 EPRSP07814 1512 aaKnown RBP6.91□□□□□ -1.3
FGD4-201ENST00000395740 ZMYM4Q5VZL5 1548 aa6.91□□□□□ -1.3
FGD4-201ENST00000395740 MBD5Q9P267 1494 aa6.91□□□□□ -1.3
FGD4-201ENST00000395740 INSRP06213 1382 aa6.91□□□□□ -1.3
FGD4-201ENST00000395740 IGSF5Q9NSI5 407 aa6.91□□□□□ -1.3
FGD4-201ENST00000395740 ITSN2Q9NZM3 1697 aa6.9□□□□□ -1.3
FGD4-201ENST00000395740 IQGAP2Q13576 1575 aa6.9□□□□□ -1.3
FGD4-201ENST00000395740 KDM6BO15054 1643 aa6.9□□□□□ -1.31
FGD4-201ENST00000395740 ADCY10Q96PN6 1610 aa6.89□□□□□ -1.31
FGD4-201ENST00000395740 MPHOSPH9Q99550 1183 aa6.89□□□□□ -1.31
FGD4-201ENST00000395740 CROCC2H7BZ55 1655 aa6.89□□□□□ -1.31
FGD4-201ENST00000395740 ADGRL2O95490 1459 aa6.89□□□□□ -1.31
FGD4-201ENST00000395740 UHRF1BP1Q6BDS2 1440 aa6.89□□□□□ -1.31
FGD4-201ENST00000395740 KDM5CP41229 1560 aa6.88□□□□□ -1.31
FGD4-201ENST00000395740 DAPK1P53355 1430 aa6.88□□□□□ -1.31
FGD4-201ENST00000395740 E9PCH4 1651 aa6.88□□□□□ -1.31
FGD4-201ENST00000395740 ARHGEF12Q9NZN5 1544 aa6.88□□□□□ -1.31
FGD4-201ENST00000395740 ADAMTS12P58397 1594 aa6.88□□□□□ -1.31
FGD4-201ENST00000395740 FBLN2P98095 1184 aa6.87□□□□□ -1.31
FGD4-201ENST00000395740 HIRIP3Q9BW71 556 aaPredicted RBP6.87□□□□□ -1.31
FGD4-201ENST00000395740 NUDCQ9Y266 331 aa6.87□□□□□ -1.31
FGD4-201ENST00000395740 NOP58Q9Y2X3 529 aaKnown RBP6.87□□□□□ -1.31
FGD4-201ENST00000395740 DHX29Q7Z478 1369 aaKnown RBP6.87□□□□□ -1.31
FGD4-201ENST00000395740 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
FGD4-201ENST00000395740 L3MBTL2Q969R5 705 aa6.86□□□□□ -1.31
FGD4-201ENST00000395740 ARID3CA6NKF2 412 aa6.86□□□□□ -1.31
FGD4-201ENST00000395740 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
FGD4-201ENST00000395740 IFT140Q96RY7 1462 aa6.86□□□□□ -1.31
FGD4-201ENST00000395740 ABCC5O15440 1437 aa6.85□□□□□ -1.31
FGD4-201ENST00000395740 KIF7Q2M1P5 1343 aa6.85□□□□□ -1.31
FGD4-201ENST00000395740 BCORL1Q5H9F3 1711 aa6.85□□□□□ -1.31
FGD4-201ENST00000395740 RALGAPBQ86X10 1494 aa6.85□□□□□ -1.31
FGD4-201ENST00000395740 LRPPRCP42704 1394 aaKnown RBP6.85□□□□□ -1.31
FGD4-201ENST00000395740 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
FGD4-201ENST00000395740 LAMC1P11047 1609 aa6.85□□□□□ -1.31
FGD4-201ENST00000395740 IPO9Q96P70 1041 aaKnown RBP6.84□□□□□ -1.31
FGD4-201ENST00000395740 RNF39Q9H2S5 420 aa6.84□□□□□ -1.31
FGD4-201ENST00000395740 PZPP20742 1482 aa6.84□□□□□ -1.31
FGD4-201ENST00000395740 RAPGEF6Q8TEU7 1601 aa6.84□□□□□ -1.31
FGD4-201ENST00000395740 BRD4O60885 1362 aaPredicted RBP6.84□□□□□ -1.31
FGD4-201ENST00000395740 KIAA1107Q9UPP5 1409 aa6.84□□□□□ -1.32
FGD4-201ENST00000395740 SHANK2Q9UPX8 1470 aa6.84□□□□□ -1.32
FGD4-201ENST00000395740 DEKP35659 375 aaKnown RBP6.83□□□□□ -1.32
FGD4-201ENST00000395740 KIAA0556O60303 1618 aa6.83□□□□□ -1.32
FGD4-201ENST00000395740 MS4A1P11836 297 aa6.83□□□□□ -1.32
FGD4-201ENST00000395740 ANP32AP39687 249 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms