RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 CHIC1Q5VXU3 224 aa10.67□□□□□ -0.7
FGD4-201ENST00000395740 AEBP2Q6ZN18 517 aaPredicted RBP10.45□□□□□ -0.74
FGD4-201ENST00000395740 NISCHQ9Y2I1 1504 aa10.14□□□□□ -0.79
FGD4-201ENST00000395740 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
FGD4-201ENST00000395740 PHF23Q9BUL5 403 aaPredicted RBP9.38□□□□□ -0.91
FGD4-201ENST00000395740 SENP3Q9H4L4 574 aaPredicted RBP9.06□□□□□ -0.96
FGD4-201ENST00000395740 PLPPR3Q6T4P5 718 aa8.85□□□□□ -0.99
FGD4-201ENST00000395740 CCDC180Q9P1Z9 1646 aa8.71□□□□□ -1.02
FGD4-201ENST00000395740 POTEDQ86YR6 584 aa8.65□□□□□ -1.02
FGD4-201ENST00000395740 ZCCHC6Q5VYS8 1495 aaKnown RBP8.64□□□□□ -1.03
FGD4-201ENST00000395740 DCAF1Q9Y4B6 1507 aa8.5□□□□□ -1.05
FGD4-201ENST00000395740 HRCP23327 699 aa8.46□□□□□ -1.06
FGD4-201ENST00000395740 SHROOM4Q9ULL8 1493 aa8.4□□□□□ -1.06
FGD4-201ENST00000395740 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
FGD4-201ENST00000395740 FOXD1Q16676 465 aa8.36□□□□□ -1.07
FGD4-201ENST00000395740 PELP1Q8IZL8 1130 aaKnown RBP8.36□□□□□ -1.07
FGD4-201ENST00000395740 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
FGD4-201ENST00000395740 MYO15BQ96JP2 1530 aa8.34□□□□□ -1.07
FGD4-201ENST00000395740 MYT1Q01538 1121 aa8.22□□□□□ -1.09
FGD4-201ENST00000395740 MSH5O43196 834 aa8.19□□□□□ -1.1
FGD4-201ENST00000395740 ABCC9O60706 1549 aa8.19□□□□□ -1.1
FGD4-201ENST00000395740 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
FGD4-201ENST00000395740 ADRA2BP18089 450 aa8.17□□□□□ -1.1
FGD4-201ENST00000395740 PCGF6Q9BYE7 350 aa8.17□□□□□ -1.1
FGD4-201ENST00000395740 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
FGD4-201ENST00000395740 PPP6R1Q9UPN7 881 aa8.11□□□□□ -1.11
FGD4-201ENST00000395740 DNAJC5BQ9UF47 199 aa8.1□□□□□ -1.11
FGD4-201ENST00000395740 KCNA4P22459 653 aa8.08□□□□□ -1.12
FGD4-201ENST00000395740 RB1CC1Q8TDY2 1594 aa8.07□□□□□ -1.12
FGD4-201ENST00000395740 ILDR1Q86SU0 546 aaPredicted RBP8.06□□□□□ -1.12
FGD4-201ENST00000395740 RSF1Q96T23 1441 aaPredicted RBP8.02□□□□□ -1.13
FGD4-201ENST00000395740 PPARGC1BQ86YN6 1023 aaKnown RBP8.01□□□□□ -1.13
FGD4-201ENST00000395740 LOC105371045A0A1W2PR82 267 aa7.98□□□□□ -1.13
FGD4-201ENST00000395740 SCRIBQ14160 1630 aa7.98□□□□□ -1.13
FGD4-201ENST00000395740 EHMT2Q96KQ7 1210 aa7.95□□□□□ -1.14
FGD4-201ENST00000395740 NACADO15069 1562 aa7.94□□□□□ -1.14
FGD4-201ENST00000395740 SOCS7O14512 581 aa7.9□□□□□ -1.15
FGD4-201ENST00000395740 TRIM41Q8WV44 630 aa7.9□□□□□ -1.15
FGD4-201ENST00000395740 EIF4G1Q04637 1599 aaKnown RBP7.88□□□□□ -1.15
FGD4-201ENST00000395740 BAZ1AQ9NRL2 1556 aaPredicted RBP7.87□□□□□ -1.15
FGD4-201ENST00000395740 TTBK1Q5TCY1 1321 aaPredicted RBP7.86□□□□□ -1.15
FGD4-201ENST00000395740 WRNQ14191 1432 aaPredicted RBP eCLIP7.86□□□□□ -1.15
FGD4-201ENST00000395740 PPP4R3CPQ6ZMV5 832 aa7.82□□□□□ -1.16
FGD4-201ENST00000395740 PABPN1Q86U42 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
FGD4-201ENST00000395740 SCAF1Q9H7N4 1312 aaKnown RBP7.81□□□□□ -1.16
FGD4-201ENST00000395740 MROH2BQ7Z745 1585 aa7.81□□□□□ -1.16
FGD4-201ENST00000395740 CECR2Q9BXF3 1484 aa7.8□□□□□ -1.16
FGD4-201ENST00000395740 EEA1Q15075 1411 aa7.79□□□□□ -1.16
FGD4-201ENST00000395740 SLC4A1APQ9BWU0 796 aaKnown RBP7.78□□□□□ -1.16
FGD4-201ENST00000395740 WIZO95785 1651 aa7.78□□□□□ -1.16
FGD4-201ENST00000395740 NCBP3Q53F19 620 aaKnown RBP7.77□□□□□ -1.17
FGD4-201ENST00000395740 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
FGD4-201ENST00000395740 TOP2AP11388 1531 aaKnown RBP7.76□□□□□ -1.17
FGD4-201ENST00000395740 CSRNP3Q8WYN3 585 aa7.76□□□□□ -1.17
FGD4-201ENST00000395740 CUX2O14529 1486 aa7.75□□□□□ -1.17
FGD4-201ENST00000395740 CENPBP07199 599 aaPredicted RBP7.74□□□□□ -1.17
FGD4-201ENST00000395740 PIAS4Q8N2W9 510 aaPredicted RBP7.74□□□□□ -1.17
FGD4-201ENST00000395740 TNIKQ9UKE5 1360 aa7.73□□□□□ -1.17
FGD4-201ENST00000395740 UNC13AQ9UPW8 1703 aa7.72□□□□□ -1.17
FGD4-201ENST00000395740 SMARCA4P51532 1647 aa7.7□□□□□ -1.18
FGD4-201ENST00000395740 SMARCA2P51531 1590 aa7.69□□□□□ -1.18
FGD4-201ENST00000395740 BICRAQ9NZM4 1560 aa7.68□□□□□ -1.18
FGD4-201ENST00000395740 CCER1Q8TC90 406 aaPredicted RBP7.67□□□□□ -1.18
FGD4-201ENST00000395740 LMTK3Q96Q04 1460 aa7.67□□□□□ -1.18
FGD4-201ENST00000395740 DIEXFQ68CQ4 756 aaKnown RBP7.66□□□□□ -1.18
FGD4-201ENST00000395740 CEP162Q5TB80 1403 aa7.66□□□□□ -1.18
FGD4-201ENST00000395740 KIF21BO75037 1637 aa7.66□□□□□ -1.18
FGD4-201ENST00000395740 PEG3Q9GZU2 1588 aa7.66□□□□□ -1.18
FGD4-201ENST00000395740 FAM9AQ8IZU1 332 aaPredicted RBP7.65□□□□□ -1.18
FGD4-201ENST00000395740 NEUROD1Q13562 356 aa7.64□□□□□ -1.19
FGD4-201ENST00000395740 CCDC88BA6NC98 1476 aa7.64□□□□□ -1.19
FGD4-201ENST00000395740 GOLGA3Q08378 1498 aa7.64□□□□□ -1.19
FGD4-201ENST00000395740 CLSPNQ9HAW4 1339 aa7.64□□□□□ -1.19
FGD4-201ENST00000395740 ZNF316A6NFI3 1004 aaPredicted RBP7.62□□□□□ -1.19
FGD4-201ENST00000395740 NPM3O75607 178 aaKnown RBP7.62□□□□□ -1.19
FGD4-201ENST00000395740 BAZ1BQ9UIG0 1483 aaKnown RBP7.62□□□□□ -1.19
FGD4-201ENST00000395740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.61□□□□□ -1.19
FGD4-201ENST00000395740 ABCC8Q09428 1581 aa7.59□□□□□ -1.19
FGD4-201ENST00000395740 CEP164Q9UPV0 1460 aa7.59□□□□□ -1.19
FGD4-201ENST00000395740 GTF3C3Q9Y5Q9 886 aa7.59□□□□□ -1.19
FGD4-201ENST00000395740 SOGA1O94964 1423 aa7.55□□□□□ -1.2
FGD4-201ENST00000395740 CNKSR2Q8WXI2 1034 aa7.55□□□□□ -1.2
FGD4-201ENST00000395740 VPS8Q8N3P4 1428 aa7.54□□□□□ -1.2
FGD4-201ENST00000395740 ERCC6L2Q5T890 1561 aa7.53□□□□□ -1.2
FGD4-201ENST00000395740 ERICH3Q5RHP9 1530 aa7.51□□□□□ -1.21
FGD4-201ENST00000395740 BIVM-ERCC5R4GMW8 1640 aa7.5□□□□□ -1.21
FGD4-201ENST00000395740 CLIP1P30622 1438 aa7.49□□□□□ -1.21
FGD4-201ENST00000395740 SYNJ1O43426 1573 aa7.49□□□□□ -1.21
FGD4-201ENST00000395740 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
FGD4-201ENST00000395740 ATAD2BQ9ULI0 1458 aa7.48□□□□□ -1.21
FGD4-201ENST00000395740 TOP2BQ02880 1626 aa7.48□□□□□ -1.21
FGD4-201ENST00000395740 UBTFP17480 764 aaKnown RBP7.45□□□□□ -1.22
FGD4-201ENST00000395740 ZBTB22O15209 634 aa7.45□□□□□ -1.22
FGD4-201ENST00000395740 RRBP1Q9P2E9 1410 aaKnown RBP7.43□□□□□ -1.22
FGD4-201ENST00000395740 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
FGD4-201ENST00000395740 MIER1Q8N108 512 aa7.43□□□□□ -1.22
FGD4-201ENST00000395740 PRXQ9BXM0 1461 aa7.42□□□□□ -1.22
FGD4-201ENST00000395740 APLP2Q06481 763 aa7.41□□□□□ -1.22
FGD4-201ENST00000395740 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
FGD4-201ENST00000395740 DHX57Q6P158 1386 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms