RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 KIF3BO15066 747 aa18.7■□□□□ 0.58
PPARGC1B-203ENST00000394320 PPP4R2Q9NY27 417 aa18.7■□□□□ 0.58
PPARGC1B-203ENST00000394320 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
PPARGC1B-203ENST00000394320 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
PPARGC1B-203ENST00000394320 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
PPARGC1B-203ENST00000394320 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
PPARGC1B-203ENST00000394320 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
PPARGC1B-203ENST00000394320 RALBP1Q15311 655 aa18.68■□□□□ 0.58
PPARGC1B-203ENST00000394320 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
PPARGC1B-203ENST00000394320 HNRNPMP52272 730 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■□ 26
PPARGC1B-203ENST00000394320 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
PPARGC1B-203ENST00000394320 IGF1RP08069 1367 aa18.65■□□□□ 0.58
PPARGC1B-203ENST00000394320 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
PPARGC1B-203ENST00000394320 FOXD1Q16676 465 aa18.62■□□□□ 0.57
PPARGC1B-203ENST00000394320 CALD1Q05682 793 aaKnown RBP18.62■□□□□ 0.57
PPARGC1B-203ENST00000394320 WASHC2CQ9Y4E1 1318 aa18.61■□□□□ 0.57
PPARGC1B-203ENST00000394320 NCLP19338 710 aaKnown RBP18.61■□□□□ 0.57
PPARGC1B-203ENST00000394320 CHMP4AQ9BY43 222 aa18.6■□□□□ 0.57
PPARGC1B-203ENST00000394320 UACAQ9BZF9 1416 aa18.6■□□□□ 0.57
PPARGC1B-203ENST00000394320 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
PPARGC1B-203ENST00000394320 FRAT1Q92837 279 aaPredicted RBP18.59■□□□□ 0.57
PPARGC1B-203ENST00000394320 STK26Q9P289 416 aa18.59■□□□□ 0.57
PPARGC1B-203ENST00000394320 EID1Q9Y6B2 187 aa18.58■□□□□ 0.57
PPARGC1B-203ENST00000394320 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
PPARGC1B-203ENST00000394320 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
PPARGC1B-203ENST00000394320 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
PPARGC1B-203ENST00000394320 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
PPARGC1B-203ENST00000394320 ARXQ96QS3 562 aa18.56■□□□□ 0.56
PPARGC1B-203ENST00000394320 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
PPARGC1B-203ENST00000394320 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
PPARGC1B-203ENST00000394320 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
PPARGC1B-203ENST00000394320 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
PPARGC1B-203ENST00000394320 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
PPARGC1B-203ENST00000394320 IPO8O15397 1037 aaKnown RBP18.53■□□□□ 0.56
PPARGC1B-203ENST00000394320 CUX1P39880 1505 aa18.51■□□□□ 0.55
PPARGC1B-203ENST00000394320 CFTRP13569 1480 aa18.51■□□□□ 0.55
PPARGC1B-203ENST00000394320 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
PPARGC1B-203ENST00000394320 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
PPARGC1B-203ENST00000394320 NBR1Q14596 966 aa18.49■□□□□ 0.55
PPARGC1B-203ENST00000394320 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
PPARGC1B-203ENST00000394320 OS9Q13438 667 aaPredicted RBP18.49■□□□□ 0.55
PPARGC1B-203ENST00000394320 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
PPARGC1B-203ENST00000394320 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
PPARGC1B-203ENST00000394320 NLRP13Q86W25 1043 aa18.47■□□□□ 0.55
PPARGC1B-203ENST00000394320 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
PPARGC1B-203ENST00000394320 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
PPARGC1B-203ENST00000394320 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
PPARGC1B-203ENST00000394320 DHX57Q6P158 1386 aaKnown RBP18.47■□□□□ 0.55
PPARGC1B-203ENST00000394320 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
PPARGC1B-203ENST00000394320 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
PPARGC1B-203ENST00000394320 RGS3P49796 1198 aa18.45■□□□□ 0.54
PPARGC1B-203ENST00000394320 SOX12O15370 315 aa18.44■□□□□ 0.54
PPARGC1B-203ENST00000394320 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
PPARGC1B-203ENST00000394320 NPHP1O15259 732 aa18.42■□□□□ 0.54
PPARGC1B-203ENST00000394320 CASKIN1Q8WXD9 1431 aa18.42■□□□□ 0.54
PPARGC1B-203ENST00000394320 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
PPARGC1B-203ENST00000394320 KIF21BO75037 1637 aa18.41■□□□□ 0.54
PPARGC1B-203ENST00000394320 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
PPARGC1B-203ENST00000394320 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
PPARGC1B-203ENST00000394320 ZRSR1Q15695 479 aaKnown RBP18.4■□□□□ 0.54
PPARGC1B-203ENST00000394320 PAK3O75914 559 aaPredicted RBP18.4■□□□□ 0.54
PPARGC1B-203ENST00000394320 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
PPARGC1B-203ENST00000394320 CDK11BP21127 795 aaKnown RBP18.39■□□□□ 0.53
PPARGC1B-203ENST00000394320 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■■ 26.9
PPARGC1B-203ENST00000394320 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
PPARGC1B-203ENST00000394320 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
PPARGC1B-203ENST00000394320 FYCO1Q9BQS8 1478 aa18.38■□□□□ 0.53
PPARGC1B-203ENST00000394320 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
PPARGC1B-203ENST00000394320 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
PPARGC1B-203ENST00000394320 NGDNQ8NEJ9 315 aaKnown RBP18.36■□□□□ 0.53
PPARGC1B-203ENST00000394320 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
PPARGC1B-203ENST00000394320 MCCP23508 829 aa18.36■□□□□ 0.53
PPARGC1B-203ENST00000394320 KCNJ4P48050 445 aa18.35■□□□□ 0.53
PPARGC1B-203ENST00000394320 B4GALNT3Q6L9W6 998 aa18.35■□□□□ 0.53
PPARGC1B-203ENST00000394320 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
PPARGC1B-203ENST00000394320 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
PPARGC1B-203ENST00000394320 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
PPARGC1B-203ENST00000394320 EFCAB5A4FU69 1503 aa18.34■□□□□ 0.53
PPARGC1B-203ENST00000394320 RWDD1Q9H446 243 aaPredicted RBP18.34■□□□□ 0.53
PPARGC1B-203ENST00000394320 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.53
PPARGC1B-203ENST00000394320 FGD1P98174 961 aa18.33■□□□□ 0.53
PPARGC1B-203ENST00000394320 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.53
PPARGC1B-203ENST00000394320 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
PPARGC1B-203ENST00000394320 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.52
PPARGC1B-203ENST00000394320 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
PPARGC1B-203ENST00000394320 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
PPARGC1B-203ENST00000394320 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
PPARGC1B-203ENST00000394320 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
PPARGC1B-203ENST00000394320 USP47Q96K76 1375 aa18.29■□□□□ 0.52
PPARGC1B-203ENST00000394320 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
PPARGC1B-203ENST00000394320 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
PPARGC1B-203ENST00000394320 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
PPARGC1B-203ENST00000394320 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
PPARGC1B-203ENST00000394320 AMPHP49418 695 aa18.28■□□□□ 0.52
PPARGC1B-203ENST00000394320 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
PPARGC1B-203ENST00000394320 NCOA2Q15596 1464 aa18.27■□□□□ 0.52
PPARGC1B-203ENST00000394320 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
PPARGC1B-203ENST00000394320 TOPBP1Q92547 1522 aa18.27■□□□□ 0.52
PPARGC1B-203ENST00000394320 ANKRD50Q9ULJ7 1429 aa18.26■□□□□ 0.51
PPARGC1B-203ENST00000394320 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms