RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 WDR70Q9NW82 654 aa6.88□□□□□ -1.31
GTDC1-205ENST00000392871 CLIP1P30622 1438 aa6.87□□□□□ -1.31
GTDC1-205ENST00000392871 URB2Q14146 1524 aaKnown RBP6.87□□□□□ -1.31
GTDC1-205ENST00000392871 CLEC11AQ9Y240 323 aa6.87□□□□□ -1.31
GTDC1-205ENST00000392871 TOPBP1Q92547 1522 aa6.87□□□□□ -1.31
GTDC1-205ENST00000392871 FGD5Q6ZNL6 1462 aa6.86□□□□□ -1.31
GTDC1-205ENST00000392871 DNMBPQ6XZF7 1577 aa6.86□□□□□ -1.31
GTDC1-205ENST00000392871 ZEB1P37275 1124 aaPredicted RBP6.86□□□□□ -1.31
GTDC1-205ENST00000392871 KIF21AQ7Z4S6 1674 aa6.85□□□□□ -1.31
GTDC1-205ENST00000392871 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
GTDC1-205ENST00000392871 SEMA3EO15041 775 aa6.84□□□□□ -1.31
GTDC1-205ENST00000392871 POLA1P09884 1462 aaPredicted RBP6.84□□□□□ -1.31
GTDC1-205ENST00000392871 CCER1Q8TC90 406 aaPredicted RBP6.84□□□□□ -1.31
GTDC1-205ENST00000392871 PRR29P0C7W0 189 aa6.84□□□□□ -1.31
GTDC1-205ENST00000392871 SPDYE1Q8NFV5 336 aaPredicted RBP6.84□□□□□ -1.31
GTDC1-205ENST00000392871 ERCC6Q03468 1493 aa6.84□□□□□ -1.32
GTDC1-205ENST00000392871 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.32
GTDC1-205ENST00000392871 RAD54L2Q9Y4B4 1467 aa6.83□□□□□ -1.32
GTDC1-205ENST00000392871 VPS8Q8N3P4 1428 aa6.83□□□□□ -1.32
GTDC1-205ENST00000392871 MFRPQ9BY79 579 aa6.83□□□□□ -1.32
GTDC1-205ENST00000392871 PPP1R37O75864 691 aa6.82□□□□□ -1.32
GTDC1-205ENST00000392871 PRXQ9BXM0 1461 aa6.82□□□□□ -1.32
GTDC1-205ENST00000392871 CUX2O14529 1486 aa6.82□□□□□ -1.32
GTDC1-205ENST00000392871 KIF27Q86VH2 1401 aa6.82□□□□□ -1.32
GTDC1-205ENST00000392871 ARAP1Q96P48 1450 aa6.81□□□□□ -1.32
GTDC1-205ENST00000392871 ERICH3Q5RHP9 1530 aa6.8□□□□□ -1.32
GTDC1-205ENST00000392871 PCDHB8Q9UN66 801 aa6.8□□□□□ -1.32
GTDC1-205ENST00000392871 PCDHB13Q9Y5F0 798 aa6.8□□□□□ -1.32
GTDC1-205ENST00000392871 WDR62O43379 1518 aa6.8□□□□□ -1.32
GTDC1-205ENST00000392871 ABCA10Q8WWZ4 1543 aa6.8□□□□□ -1.32
GTDC1-205ENST00000392871 TESPA1A2RU30 521 aaPredicted RBP6.79□□□□□ -1.32
GTDC1-205ENST00000392871 ARHGEF1Q92888 912 aaKnown RBP6.79□□□□□ -1.32
GTDC1-205ENST00000392871 IGF1RP08069 1367 aa6.79□□□□□ -1.32
GTDC1-205ENST00000392871 TDRD9Q8NDG6 1382 aaKnown RBP6.78□□□□□ -1.32
GTDC1-205ENST00000392871 THOC2Q8NI27 1593 aaKnown RBP6.78□□□□□ -1.32
GTDC1-205ENST00000392871 GPBP1L1Q9HC44 474 aaPredicted RBP6.77□□□□□ -1.32
GTDC1-205ENST00000392871 E2F4Q16254 413 aa6.77□□□□□ -1.33
GTDC1-205ENST00000392871 TSPYL2Q9H2G4 693 aaPredicted RBP6.76□□□□□ -1.33
GTDC1-205ENST00000392871 ZMYND10O75800 440 aa6.76□□□□□ -1.33
GTDC1-205ENST00000392871 TARBP1Q13395 1621 aaKnown RBP6.76□□□□□ -1.33
GTDC1-205ENST00000392871 REM2Q8IYK8 340 aaPredicted RBP6.75□□□□□ -1.33
GTDC1-205ENST00000392871 AKT1S1Q96B36 256 aa6.75□□□□□ -1.33
GTDC1-205ENST00000392871 PDAP1Q13442 181 aaKnown RBP6.74□□□□□ -1.33
GTDC1-205ENST00000392871 IFT140Q96RY7 1462 aa6.74□□□□□ -1.33
GTDC1-205ENST00000392871 ARHGAP35Q9NRY4 1499 aa6.74□□□□□ -1.33
GTDC1-205ENST00000392871 CARMIL1Q5VZK9 1371 aa6.74□□□□□ -1.33
GTDC1-205ENST00000392871 AQRO60306 1485 aaKnown RBP eCLIP6.74□□□□□ -1.33
GTDC1-205ENST00000392871 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
GTDC1-205ENST00000392871 KANK4Q5T7N3 995 aaPredicted RBP6.74□□□□□ -1.33
GTDC1-205ENST00000392871 ZNF467Q7Z7K2 595 aaPredicted RBP6.74□□□□□ -1.33
GTDC1-205ENST00000392871 WDR97A6NE52 1622 aa6.74□□□□□ -1.33
GTDC1-205ENST00000392871 ZNF608Q9ULD9 1512 aaPredicted RBP6.73□□□□□ -1.33
GTDC1-205ENST00000392871 FBXO22Q8NEZ5 403 aa6.73□□□□□ -1.33
GTDC1-205ENST00000392871 NCKAP5LQ9HCH0 1330 aa6.73□□□□□ -1.33
GTDC1-205ENST00000392871 ABCA5Q8WWZ7 1642 aa6.72□□□□□ -1.33
GTDC1-205ENST00000392871 PSEN1P49768 467 aa6.72□□□□□ -1.33
GTDC1-205ENST00000392871 IL27Q8NEV9 243 aa6.72□□□□□ -1.33
GTDC1-205ENST00000392871 CHADLQ6NUI6 762 aa6.71□□□□□ -1.34
GTDC1-205ENST00000392871 C1orf115Q9H7X2 142 aa6.71□□□□□ -1.34
GTDC1-205ENST00000392871 EFCAB3Q8N7B9 438 aa6.71□□□□□ -1.34
GTDC1-205ENST00000392871 PHF8Q9UPP1 1060 aa6.71□□□□□ -1.34
GTDC1-205ENST00000392871 ARID3AQ99856 593 aa6.69□□□□□ -1.34
GTDC1-205ENST00000392871 GRIN2BQ13224 1484 aa6.69□□□□□ -1.34
GTDC1-205ENST00000392871 PITPNM1O00562 1244 aa6.69□□□□□ -1.34
GTDC1-205ENST00000392871 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
GTDC1-205ENST00000392871 LARP6Q9BRS8 491 aaKnown RBP6.68□□□□□ -1.34
GTDC1-205ENST00000392871 ZMYND15Q9H091 742 aa6.67□□□□□ -1.34
GTDC1-205ENST00000392871 CCDC61Q9Y6R9 512 aa6.67□□□□□ -1.34
GTDC1-205ENST00000392871 EIF4G3O43432 1585 aaKnown RBP6.67□□□□□ -1.34
GTDC1-205ENST00000392871 PCF11O94913 1555 aaKnown RBP6.67□□□□□ -1.34
GTDC1-205ENST00000392871 CUL7Q14999 1698 aa6.67□□□□□ -1.34
GTDC1-205ENST00000392871 RBM26Q5T8P6 1007 aaKnown RBP6.67□□□□□ -1.34
GTDC1-205ENST00000392871 FHAD1B1AJZ9 1412 aa6.67□□□□□ -1.34
GTDC1-205ENST00000392871 DIEXFQ68CQ4 756 aaKnown RBP6.66□□□□□ -1.34
GTDC1-205ENST00000392871 CABP2Q9NPB3 220 aa6.66□□□□□ -1.34
GTDC1-205ENST00000392871 TIAM1Q13009 1591 aa6.66□□□□□ -1.34
GTDC1-205ENST00000392871 SNAPC4Q5SXM2 1469 aa6.65□□□□□ -1.34
GTDC1-205ENST00000392871 MLLT3P42568 568 aaPredicted RBP6.65□□□□□ -1.34
GTDC1-205ENST00000392871 IFNL1Q8IU54 200 aa6.65□□□□□ -1.34
GTDC1-205ENST00000392871 RBM42Q9BTD8 480 aaKnown RBP6.65□□□□□ -1.34
GTDC1-205ENST00000392871 FHOD3Q2V2M9 1422 aa6.65□□□□□ -1.35
GTDC1-205ENST00000392871 RRBP1Q9P2E9 1410 aaKnown RBP6.65□□□□□ -1.35
GTDC1-205ENST00000392871 ARID3CA6NKF2 412 aa6.65□□□□□ -1.35
GTDC1-205ENST00000392871 ITGAEP38570 1179 aa6.65□□□□□ -1.35
GTDC1-205ENST00000392871 KDM4CQ9H3R0 1056 aa6.65□□□□□ -1.35
GTDC1-205ENST00000392871 PBRM1Q86U86 1689 aa6.64□□□□□ -1.35
GTDC1-205ENST00000392871 ZNF579Q8NAF0 562 aaKnown RBP6.64□□□□□ -1.35
GTDC1-205ENST00000392871 DHX57Q6P158 1386 aaKnown RBP6.64□□□□□ -1.35
GTDC1-205ENST00000392871 ADAMTS12P58397 1594 aa6.64□□□□□ -1.35
GTDC1-205ENST00000392871 NLRP6P59044 892 aa6.64□□□□□ -1.35
GTDC1-205ENST00000392871 MS4A4AQ96JQ5 239 aa6.64□□□□□ -1.35
GTDC1-205ENST00000392871 CCNB3Q8WWL7 1395 aa6.63□□□□□ -1.35
GTDC1-205ENST00000392871 MKRN3Q13064 507 aaKnown RBP6.63□□□□□ -1.35
GTDC1-205ENST00000392871 CFAP43Q8NDM7 1665 aa6.63□□□□□ -1.35
GTDC1-205ENST00000392871 MAGI1Q96QZ7 1491 aaPredicted RBP6.63□□□□□ -1.35
GTDC1-205ENST00000392871 MFSD10Q14728 455 aa6.62□□□□□ -1.35
GTDC1-205ENST00000392871 AK7Q96M32 723 aa6.62□□□□□ -1.35
GTDC1-205ENST00000392871 CRISPLD2Q9H0B8 497 aa6.62□□□□□ -1.35
GTDC1-205ENST00000392871 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
GTDC1-205ENST00000392871 CTTNBP2Q8WZ74 1663 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms