RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 CHIC1Q5VXU3 224 aa12.4□□□□□ -0.43
GTDC1-205ENST00000392871 AEBP2Q6ZN18 517 aaPredicted RBP12.25□□□□□ -0.45
GTDC1-205ENST00000392871 PHF23Q9BUL5 403 aaPredicted RBP11.08□□□□□ -0.64
GTDC1-205ENST00000392871 POTEDQ86YR6 584 aa10.74□□□□□ -0.69
GTDC1-205ENST00000392871 PLPPR3Q6T4P5 718 aa10.27□□□□□ -0.77
GTDC1-205ENST00000392871 SENP3Q9H4L4 574 aaPredicted RBP10.11□□□□□ -0.79
GTDC1-205ENST00000392871 ADRA2BP18089 450 aa9.79□□□□□ -0.84
GTDC1-205ENST00000392871 EHMT2Q96KQ7 1210 aa9.78□□□□□ -0.84
GTDC1-205ENST00000392871 KCNA4P22459 653 aa9.71□□□□□ -0.86
GTDC1-205ENST00000392871 PPP6R1Q9UPN7 881 aa9.62□□□□□ -0.87
GTDC1-205ENST00000392871 NISCHQ9Y2I1 1504 aa9.59□□□□□ -0.87
GTDC1-205ENST00000392871 FOXD1Q16676 465 aa9.44□□□□□ -0.9
GTDC1-205ENST00000392871 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
GTDC1-205ENST00000392871 SLC4A1APQ9BWU0 796 aaKnown RBP9.26□□□□□ -0.93
GTDC1-205ENST00000392871 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
GTDC1-205ENST00000392871 NPM3O75607 178 aaKnown RBP9.01□□□□□ -0.97
GTDC1-205ENST00000392871 PIAS4Q8N2W9 510 aaPredicted RBP9□□□□□ -0.97
GTDC1-205ENST00000392871 ZBTB22O15209 634 aa9□□□□□ -0.97
GTDC1-205ENST00000392871 NCBP3Q53F19 620 aaKnown RBP8.98□□□□□ -0.97
GTDC1-205ENST00000392871 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
GTDC1-205ENST00000392871 RTN4Q9NQC3 1192 aaKnown RBP8.8□□□□□ -1
GTDC1-205ENST00000392871 CNKSR2Q8WXI2 1034 aa8.74□□□□□ -1.01
GTDC1-205ENST00000392871 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
GTDC1-205ENST00000392871 MAPK8IP2Q13387 824 aaPredicted RBP8.58□□□□□ -1.04
GTDC1-205ENST00000392871 AMER1Q5JTC6 1135 aaPredicted RBP8.58□□□□□ -1.04
GTDC1-205ENST00000392871 SCAF1Q9H7N4 1312 aaKnown RBP8.56□□□□□ -1.04
GTDC1-205ENST00000392871 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
GTDC1-205ENST00000392871 RNF216Q9NWF9 866 aaPredicted RBP8.43□□□□□ -1.06
GTDC1-205ENST00000392871 SLC4A2P04920 1241 aa8.41□□□□□ -1.06
GTDC1-205ENST00000392871 FKBP8Q14318 412 aa8.4□□□□□ -1.07
GTDC1-205ENST00000392871 MSH5O43196 834 aa8.33□□□□□ -1.08
GTDC1-205ENST00000392871 CCDC180Q9P1Z9 1646 aa8.32□□□□□ -1.08
GTDC1-205ENST00000392871 HOXD11P31277 338 aaPredicted RBP8.26□□□□□ -1.09
GTDC1-205ENST00000392871 ATXN8OSP0DMR3 200 aa8.22□□□□□ -1.09
GTDC1-205ENST00000392871 MYCNP04198 464 aaPredicted RBP8.22□□□□□ -1.09
GTDC1-205ENST00000392871 DMRT2Q9Y5R5 561 aa8.2□□□□□ -1.1
GTDC1-205ENST00000392871 ATF5Q9Y2D1 282 aaPredicted RBP8.14□□□□□ -1.11
GTDC1-205ENST00000392871 SHROOM4Q9ULL8 1493 aa8.1□□□□□ -1.11
GTDC1-205ENST00000392871 ZCCHC6Q5VYS8 1495 aaKnown RBP8.04□□□□□ -1.12
GTDC1-205ENST00000392871 PRKCSHP14314 528 aaPredicted RBP8□□□□□ -1.13
GTDC1-205ENST00000392871 ABCC9O60706 1549 aa7.98□□□□□ -1.13
GTDC1-205ENST00000392871 DCAF8L2P0C7V8 631 aa7.98□□□□□ -1.13
GTDC1-205ENST00000392871 PLCB2Q00722 1185 aa7.98□□□□□ -1.13
GTDC1-205ENST00000392871 POTEHQ6S545 545 aa7.97□□□□□ -1.13
GTDC1-205ENST00000392871 DCAF1Q9Y4B6 1507 aa7.91□□□□□ -1.14
GTDC1-205ENST00000392871 HAP1P54257 671 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-205ENST00000392871 U3KPZ7 1027 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-205ENST00000392871 SUPT5HO00267 1087 aaKnown RBP7.86□□□□□ -1.15
GTDC1-205ENST00000392871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.86□□□□□ -1.15
GTDC1-205ENST00000392871 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
GTDC1-205ENST00000392871 MYO15BQ96JP2 1530 aa7.83□□□□□ -1.16
GTDC1-205ENST00000392871 SAMD1Q6SPF0 538 aaPredicted RBP7.82□□□□□ -1.16
GTDC1-205ENST00000392871 TAOK2Q9UL54 1235 aa7.81□□□□□ -1.16
GTDC1-205ENST00000392871 ZNF219Q9P2Y4 722 aaPredicted RBP7.8□□□□□ -1.16
GTDC1-205ENST00000392871 NACADO15069 1562 aa7.79□□□□□ -1.16
GTDC1-205ENST00000392871 SPDYE4A6NLX3 237 aa7.79□□□□□ -1.16
GTDC1-205ENST00000392871 FBXO3Q9UK99 471 aa7.79□□□□□ -1.16
GTDC1-205ENST00000392871 IFNLR1Q8IU57 520 aaPredicted RBP7.78□□□□□ -1.16
GTDC1-205ENST00000392871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.78□□□□□ -1.16
GTDC1-205ENST00000392871 HNRNPUL2Q1KMD3 747 aaKnown RBP7.78□□□□□ -1.16
GTDC1-205ENST00000392871 BCANQ96GW7 911 aa7.78□□□□□ -1.16
GTDC1-205ENST00000392871 VASPP50552 380 aaPredicted RBP7.77□□□□□ -1.17
GTDC1-205ENST00000392871 MKRN4PQ13434 485 aaPredicted RBP7.77□□□□□ -1.17
GTDC1-205ENST00000392871 PKD2Q13563 968 aa7.75□□□□□ -1.17
GTDC1-205ENST00000392871 PROM2Q8N271 834 aa7.75□□□□□ -1.17
GTDC1-205ENST00000392871 RB1CC1Q8TDY2 1594 aa7.73□□□□□ -1.17
GTDC1-205ENST00000392871 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
GTDC1-205ENST00000392871 FBLN2P98095 1184 aa7.71□□□□□ -1.17
GTDC1-205ENST00000392871 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
GTDC1-205ENST00000392871 SCRIBQ14160 1630 aa7.69□□□□□ -1.18
GTDC1-205ENST00000392871 VSIG10Q8N0Z9 540 aa7.67□□□□□ -1.18
GTDC1-205ENST00000392871 NPM1P06748 294 aaKnown RBP eCLIP7.64□□□□□ -1.19
GTDC1-205ENST00000392871 PLSCR2Q9NRY7 297 aa7.62□□□□□ -1.19
GTDC1-205ENST00000392871 PAXIP1Q6ZW49 1069 aaPredicted RBP7.58□□□□□ -1.2
GTDC1-205ENST00000392871 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
GTDC1-205ENST00000392871 PABPN1Q86U42 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
GTDC1-205ENST00000392871 BBXQ8WY36 941 aaPredicted RBP7.55□□□□□ -1.2
GTDC1-205ENST00000392871 UNC13AQ9UPW8 1703 aa7.54□□□□□ -1.2
GTDC1-205ENST00000392871 SPINK5Q9NQ38 1064 aaPredicted RBP7.53□□□□□ -1.2
GTDC1-205ENST00000392871 TSHZ2Q9NRE2 1034 aa7.53□□□□□ -1.2
GTDC1-205ENST00000392871 POLA2Q14181 598 aa7.53□□□□□ -1.2
GTDC1-205ENST00000392871 BICRAQ9NZM4 1560 aa7.52□□□□□ -1.21
GTDC1-205ENST00000392871 ECM2O94769 699 aaPredicted RBP7.52□□□□□ -1.21
GTDC1-205ENST00000392871 TRHP20396 242 aaPredicted RBP7.52□□□□□ -1.21
GTDC1-205ENST00000392871 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.52□□□□□ -1.21
GTDC1-205ENST00000392871 RGL2O15211 777 aa7.51□□□□□ -1.21
GTDC1-205ENST00000392871 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
GTDC1-205ENST00000392871 APLP2Q06481 763 aa7.49□□□□□ -1.21
GTDC1-205ENST00000392871 RSF1Q96T23 1441 aaPredicted RBP7.48□□□□□ -1.21
GTDC1-205ENST00000392871 CECR2Q9BXF3 1484 aa7.48□□□□□ -1.21
GTDC1-205ENST00000392871 KLHL34Q8N239 644 aa7.48□□□□□ -1.21
GTDC1-205ENST00000392871 SPOCK2Q92563 424 aa7.48□□□□□ -1.21
GTDC1-205ENST00000392871 TULP1O00294 542 aaPredicted RBP7.44□□□□□ -1.22
GTDC1-205ENST00000392871 SPRYD3Q8NCJ5 442 aa7.42□□□□□ -1.22
GTDC1-205ENST00000392871 MROH2BQ7Z745 1585 aa7.41□□□□□ -1.22
GTDC1-205ENST00000392871 BAZ1AQ9NRL2 1556 aaPredicted RBP7.39□□□□□ -1.23
GTDC1-205ENST00000392871 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
GTDC1-205ENST00000392871 CAPN15O75808 1086 aa7.38□□□□□ -1.23
GTDC1-205ENST00000392871 CHGAP10645 457 aaKnown RBP7.38□□□□□ -1.23
GTDC1-205ENST00000392871 WIZO95785 1651 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms