RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
ZNF541-203ENST00000391901 KIF3BO15066 747 aa18.88■□□□□ 0.61
ZNF541-203ENST00000391901 FRAT1Q92837 279 aaPredicted RBP18.88■□□□□ 0.61
ZNF541-203ENST00000391901 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
ZNF541-203ENST00000391901 LAS1LQ9Y4W2 734 aaKnown RBP18.87■□□□□ 0.61
ZNF541-203ENST00000391901 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
ZNF541-203ENST00000391901 SRPK2P78362 688 aaKnown RBP18.85■□□□□ 0.61
ZNF541-203ENST00000391901 KIF21BO75037 1637 aa18.85■□□□□ 0.61
ZNF541-203ENST00000391901 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
ZNF541-203ENST00000391901 STK26Q9P289 416 aa18.84■□□□□ 0.61
ZNF541-203ENST00000391901 RGS3P49796 1198 aa18.83■□□□□ 0.6
ZNF541-203ENST00000391901 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
ZNF541-203ENST00000391901 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
ZNF541-203ENST00000391901 MORC1Q86VD1 984 aa18.81■□□□□ 0.6
ZNF541-203ENST00000391901 ARXQ96QS3 562 aa18.81■□□□□ 0.6
ZNF541-203ENST00000391901 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
ZNF541-203ENST00000391901 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
ZNF541-203ENST00000391901 PHLDB1Q86UU1 1377 aa18.8■□□□□ 0.6
ZNF541-203ENST00000391901 PTPRGP23470 1445 aa18.78■□□□□ 0.6
ZNF541-203ENST00000391901 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
ZNF541-203ENST00000391901 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
ZNF541-203ENST00000391901 CFTRP13569 1480 aa18.77■□□□□ 0.6
ZNF541-203ENST00000391901 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
ZNF541-203ENST00000391901 NOP58Q9Y2X3 529 aaKnown RBP18.76■□□□□ 0.59
ZNF541-203ENST00000391901 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
ZNF541-203ENST00000391901 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
ZNF541-203ENST00000391901 ST20-MTHFSA0A0A6YYL1 179 aa18.75■□□□□ 0.59
ZNF541-203ENST00000391901 A0A0G2JS52 829 aa18.75■□□□□ 0.59
ZNF541-203ENST00000391901 RALBP1Q15311 655 aa18.75■□□□□ 0.59
ZNF541-203ENST00000391901 SOX12O15370 315 aa18.75■□□□□ 0.59
ZNF541-203ENST00000391901 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
ZNF541-203ENST00000391901 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.74■□□□□ 0.59
ZNF541-203ENST00000391901 ERICH6BQ5W0A0 696 aa18.73■□□□□ 0.59
ZNF541-203ENST00000391901 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
ZNF541-203ENST00000391901 BECN1Q14457 450 aa18.71■□□□□ 0.59
ZNF541-203ENST00000391901 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
ZNF541-203ENST00000391901 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
ZNF541-203ENST00000391901 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
ZNF541-203ENST00000391901 NESP48681 1621 aa18.69■□□□□ 0.58
ZNF541-203ENST00000391901 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
ZNF541-203ENST00000391901 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
ZNF541-203ENST00000391901 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
ZNF541-203ENST00000391901 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
ZNF541-203ENST00000391901 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
ZNF541-203ENST00000391901 PRXQ9BXM0 1461 aa18.66■□□□□ 0.58
ZNF541-203ENST00000391901 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
ZNF541-203ENST00000391901 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
ZNF541-203ENST00000391901 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.58
ZNF541-203ENST00000391901 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
ZNF541-203ENST00000391901 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.57
ZNF541-203ENST00000391901 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
ZNF541-203ENST00000391901 PNNQ9H307 717 aaKnown RBP18.64■□□□□ 0.57
ZNF541-203ENST00000391901 CASKIN1Q8WXD9 1431 aa18.63■□□□□ 0.57
ZNF541-203ENST00000391901 HDGFL2Q7Z4V5 671 aaPredicted RBP18.62■□□□□ 0.57
ZNF541-203ENST00000391901 TRAK1Q9UPV9 953 aa18.62■□□□□ 0.57
ZNF541-203ENST00000391901 CUX1P39880 1505 aa18.61■□□□□ 0.57
ZNF541-203ENST00000391901 MS4A1P11836 297 aa18.61■□□□□ 0.57
ZNF541-203ENST00000391901 USP47Q96K76 1375 aa18.6■□□□□ 0.57
ZNF541-203ENST00000391901 PANK3Q9H999 370 aa18.59■□□□□ 0.57
ZNF541-203ENST00000391901 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
ZNF541-203ENST00000391901 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
ZNF541-203ENST00000391901 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
ZNF541-203ENST00000391901 CCDC146Q8IYE0 955 aa18.57■□□□□ 0.56
ZNF541-203ENST00000391901 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
ZNF541-203ENST00000391901 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
ZNF541-203ENST00000391901 KIF15Q9NS87 1388 aa18.54■□□□□ 0.56
ZNF541-203ENST00000391901 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
ZNF541-203ENST00000391901 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
ZNF541-203ENST00000391901 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-203ENST00000391901 GOLGA2Q08379 1002 aa18.53■□□□□ 0.56
ZNF541-203ENST00000391901 CHMP4BQ9H444 224 aaKnown RBP18.53■□□□□ 0.56
ZNF541-203ENST00000391901 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
ZNF541-203ENST00000391901 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
ZNF541-203ENST00000391901 CYB5RLQ6IPT4 315 aa18.52■□□□□ 0.56
ZNF541-203ENST00000391901 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
ZNF541-203ENST00000391901 FYCO1Q9BQS8 1478 aa18.5■□□□□ 0.55
ZNF541-203ENST00000391901 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
ZNF541-203ENST00000391901 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
ZNF541-203ENST00000391901 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
ZNF541-203ENST00000391901 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
ZNF541-203ENST00000391901 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
ZNF541-203ENST00000391901 NAP1L5Q96NT1 182 aaPredicted RBP18.48■□□□□ 0.55
ZNF541-203ENST00000391901 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
ZNF541-203ENST00000391901 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
ZNF541-203ENST00000391901 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
ZNF541-203ENST00000391901 GOLGA6L22H0YM25 854 aa18.47■□□□□ 0.55
ZNF541-203ENST00000391901 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
ZNF541-203ENST00000391901 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
ZNF541-203ENST00000391901 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
ZNF541-203ENST00000391901 RTF1Q92541 710 aaKnown RBP18.46■□□□□ 0.55
ZNF541-203ENST00000391901 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
ZNF541-203ENST00000391901 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
ZNF541-203ENST00000391901 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
ZNF541-203ENST00000391901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.44■□□□□ 0.54
ZNF541-203ENST00000391901 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
ZNF541-203ENST00000391901 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
ZNF541-203ENST00000391901 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
ZNF541-203ENST00000391901 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
ZNF541-203ENST00000391901 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
ZNF541-203ENST00000391901 OS9Q13438 667 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms