RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
RPL13A-201ENST00000391857 SCAPERQ9BY12 1400 aa24.43■■□□□ 1.5
RPL13A-201ENST00000391857 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
RPL13A-201ENST00000391857 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
RPL13A-201ENST00000391857 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
RPL13A-201ENST00000391857 ATP10AO60312 1499 aa24.39■■□□□ 1.5
RPL13A-201ENST00000391857 PLCH2O75038 1416 aa24.37■■□□□ 1.49
RPL13A-201ENST00000391857 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
RPL13A-201ENST00000391857 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
RPL13A-201ENST00000391857 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
RPL13A-201ENST00000391857 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
RPL13A-201ENST00000391857 EFCAB2Q5VUJ9 269 aa24.31■■□□□ 1.48
RPL13A-201ENST00000391857 UHRF1BP1Q6BDS2 1440 aa24.31■■□□□ 1.48
RPL13A-201ENST00000391857 PTPRTO14522 1441 aa24.29■■□□□ 1.48
RPL13A-201ENST00000391857 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
RPL13A-201ENST00000391857 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
RPL13A-201ENST00000391857 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
RPL13A-201ENST00000391857 SETD1BQ9UPS6 1966 aaKnown RBP24.21■■□□□ 1.47
RPL13A-201ENST00000391857 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
RPL13A-201ENST00000391857 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
RPL13A-201ENST00000391857 IQSEC2Q5JU85 1478 aa24.16■■□□□ 1.46
RPL13A-201ENST00000391857 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
RPL13A-201ENST00000391857 TRAPPC8Q9Y2L5 1435 aa24.15■■□□□ 1.46
RPL13A-201ENST00000391857 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
RPL13A-201ENST00000391857 CDK11AQ9UQ88 783 aaPredicted RBP24.13■■□□□ 1.45
RPL13A-201ENST00000391857 KDM5CP41229 1560 aa24.12■■□□□ 1.45
RPL13A-201ENST00000391857 EEA1Q15075 1411 aa24.12■■□□□ 1.45
RPL13A-201ENST00000391857 NCOA1Q15788 1441 aa24.11■■□□□ 1.45
RPL13A-201ENST00000391857 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
RPL13A-201ENST00000391857 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
RPL13A-201ENST00000391857 REREQ9P2R6 1566 aa24.08■■□□□ 1.45
RPL13A-201ENST00000391857 MLH3Q9UHC1 1453 aa24.08■■□□□ 1.45
RPL13A-201ENST00000391857 AGLP35573 1532 aa24.06■■□□□ 1.44
RPL13A-201ENST00000391857 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
RPL13A-201ENST00000391857 C3P01024 1663 aa24.05■■□□□ 1.44
RPL13A-201ENST00000391857 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
RPL13A-201ENST00000391857 TROQ12816 1431 aaPredicted RBP24.04■■□□□ 1.44
RPL13A-201ENST00000391857 UBAP1LF5GYI3 381 aa24.03■■□□□ 1.44
RPL13A-201ENST00000391857 KIF14Q15058 1648 aa24.02■■□□□ 1.44
RPL13A-201ENST00000391857 FMN1Q68DA7 1419 aa24.02■■□□□ 1.44
RPL13A-201ENST00000391857 ZNF335Q9H4Z2 1342 aaPredicted RBP24.02■■□□□ 1.44
RPL13A-201ENST00000391857 NCKAP5LQ9HCH0 1330 aa24.01■■□□□ 1.43
RPL13A-201ENST00000391857 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
RPL13A-201ENST00000391857 ABCA6Q8N139 1617 aa23.99■■□□□ 1.43
RPL13A-201ENST00000391857 CAMSAP1Q5T5Y3 1602 aa23.96■■□□□ 1.43
RPL13A-201ENST00000391857 CLIP1P30622 1438 aa23.96■■□□□ 1.43
RPL13A-201ENST00000391857 NPATQ14207 1427 aa23.96■■□□□ 1.43
RPL13A-201ENST00000391857 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
RPL13A-201ENST00000391857 ARHGAP35Q9NRY4 1499 aa23.93■■□□□ 1.42
RPL13A-201ENST00000391857 PKD2Q13563 968 aa23.92■■□□□ 1.42
RPL13A-201ENST00000391857 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
RPL13A-201ENST00000391857 ABCC1P33527 1531 aa23.89■■□□□ 1.41
RPL13A-201ENST00000391857 CDC42BPBQ9Y5S2 1711 aa23.87■■□□□ 1.41
RPL13A-201ENST00000391857 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
RPL13A-201ENST00000391857 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
RPL13A-201ENST00000391857 PLA2R1Q13018 1463 aa23.85■■□□□ 1.41
RPL13A-201ENST00000391857 HSPA1LP34931 641 aa23.84■■□□□ 1.41
RPL13A-201ENST00000391857 TCOF1Q13428 1488 aaKnown RBP23.83■■□□□ 1.41
RPL13A-201ENST00000391857 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
RPL13A-201ENST00000391857 PREX2Q70Z35 1606 aa23.81■■□□□ 1.4
RPL13A-201ENST00000391857 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
RPL13A-201ENST00000391857 PTPRKQ15262 1439 aa23.8■■□□□ 1.4
RPL13A-201ENST00000391857 SPAG9O60271 1321 aaKnown RBP23.8■■□□□ 1.4
RPL13A-201ENST00000391857 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
RPL13A-201ENST00000391857 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
RPL13A-201ENST00000391857 SAMD9LQ8IVG5 1584 aa23.78■■□□□ 1.4
RPL13A-201ENST00000391857 HNRNPMP52272 730 aaKnown RBP eCLIP23.77■■□□□ 1.43e-8■■■■■ 33.5
RPL13A-201ENST00000391857 PIP4K2BP78356 416 aa23.77■■□□□ 1.4
RPL13A-201ENST00000391857 TOM1O60784 492 aa23.75■■□□□ 1.39
RPL13A-201ENST00000391857 GGT6Q6P531 493 aa23.75■■□□□ 1.39
RPL13A-201ENST00000391857 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
RPL13A-201ENST00000391857 LRRIQ1Q96JM4 1722 aa23.75■■□□□ 1.39
RPL13A-201ENST00000391857 MED1Q15648 1581 aaPredicted RBP23.74■■□□□ 1.39
RPL13A-201ENST00000391857 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
RPL13A-201ENST00000391857 ZNF142P52746 1687 aaPredicted RBP23.71■■□□□ 1.39
RPL13A-201ENST00000391857 MYO3AQ8NEV4 1616 aa23.71■■□□□ 1.39
RPL13A-201ENST00000391857 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
RPL13A-201ENST00000391857 A2MP01023 1474 aa23.69■■□□□ 1.38
RPL13A-201ENST00000391857 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
RPL13A-201ENST00000391857 CLTCQ00610 1675 aaKnown RBP23.68■■□□□ 1.38
RPL13A-201ENST00000391857 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
RPL13A-201ENST00000391857 GPATCH8Q9UKJ3 1502 aaKnown RBP23.68■■□□□ 1.38
RPL13A-201ENST00000391857 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
RPL13A-201ENST00000391857 A2ML1A8K2U0 1454 aa23.67■■□□□ 1.38
RPL13A-201ENST00000391857 PLXNC1O60486 1568 aa23.66■■□□□ 1.38
RPL13A-201ENST00000391857 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
RPL13A-201ENST00000391857 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
RPL13A-201ENST00000391857 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
RPL13A-201ENST00000391857 SHANK2Q9UPX8 1470 aa23.64■■□□□ 1.38
RPL13A-201ENST00000391857 CPS1P31327 1500 aa23.64■■□□□ 1.37
RPL13A-201ENST00000391857 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
RPL13A-201ENST00000391857 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
RPL13A-201ENST00000391857 DNMT1P26358 1616 aaKnown RBP23.61■■□□□ 1.37
RPL13A-201ENST00000391857 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
RPL13A-201ENST00000391857 PLEKHH2Q8IVE3 1493 aa23.59■■□□□ 1.37
RPL13A-201ENST00000391857 INO80Q9ULG1 1556 aaPredicted RBP23.58■■□□□ 1.37
RPL13A-201ENST00000391857 ANKLE2Q86XL3 938 aa23.57■■□□□ 1.36
RPL13A-201ENST00000391857 TNRQ92752 1358 aa23.56■■□□□ 1.36
RPL13A-201ENST00000391857 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
RPL13A-201ENST00000391857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms