RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 FER1L4A9Z1Z3 1794 aa16.41■□□□□ 0.22
TRAV18-201ENST00000390446 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
TRAV18-201ENST00000390446 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
TRAV18-201ENST00000390446 ZMYM4Q5VZL5 1548 aa16.37■□□□□ 0.21
TRAV18-201ENST00000390446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRAV18-201ENST00000390446 HECW1Q76N89 1606 aa16.37■□□□□ 0.21
TRAV18-201ENST00000390446 UHRF1BP1Q6BDS2 1440 aa16.36■□□□□ 0.21
TRAV18-201ENST00000390446 ATP10AO60312 1499 aa16.36■□□□□ 0.21
TRAV18-201ENST00000390446 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
TRAV18-201ENST00000390446 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
TRAV18-201ENST00000390446 SPATA31D1Q6ZQQ2 1576 aa16.35■□□□□ 0.21
TRAV18-201ENST00000390446 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
TRAV18-201ENST00000390446 C9orf84Q5VXU9 1444 aa16.34■□□□□ 0.21
TRAV18-201ENST00000390446 SIGLEC1Q9BZZ2 1709 aa16.33■□□□□ 0.2
TRAV18-201ENST00000390446 PLCH2O75038 1416 aa16.3■□□□□ 0.2
TRAV18-201ENST00000390446 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
TRAV18-201ENST00000390446 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
TRAV18-201ENST00000390446 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
TRAV18-201ENST00000390446 PTPRTO14522 1441 aa16.27■□□□□ 0.19
TRAV18-201ENST00000390446 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
TRAV18-201ENST00000390446 CDK13Q14004 1512 aaKnown RBP16.25■□□□□ 0.19
TRAV18-201ENST00000390446 UBAP1LF5GYI3 381 aa16.25■□□□□ 0.19
TRAV18-201ENST00000390446 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
TRAV18-201ENST00000390446 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
TRAV18-201ENST00000390446 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
TRAV18-201ENST00000390446 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
TRAV18-201ENST00000390446 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
TRAV18-201ENST00000390446 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
TRAV18-201ENST00000390446 MYO5CQ9NQX4 1742 aa16.19■□□□□ 0.18
TRAV18-201ENST00000390446 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
TRAV18-201ENST00000390446 NCKAP5LQ9HCH0 1330 aa16.17■□□□□ 0.18
TRAV18-201ENST00000390446 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
TRAV18-201ENST00000390446 CLIP1P30622 1438 aa16.16■□□□□ 0.18
TRAV18-201ENST00000390446 EEA1Q15075 1411 aa16.16■□□□□ 0.18
TRAV18-201ENST00000390446 LTBP4Q8N2S1 1624 aa16.15■□□□□ 0.18
TRAV18-201ENST00000390446 C3P01024 1663 aa16.14■□□□□ 0.18
TRAV18-201ENST00000390446 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
TRAV18-201ENST00000390446 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
TRAV18-201ENST00000390446 KIF14Q15058 1648 aa16.12■□□□□ 0.17
TRAV18-201ENST00000390446 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
TRAV18-201ENST00000390446 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
TRAV18-201ENST00000390446 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
TRAV18-201ENST00000390446 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
TRAV18-201ENST00000390446 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
TRAV18-201ENST00000390446 KDM5CP41229 1560 aa16.1■□□□□ 0.17
TRAV18-201ENST00000390446 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
TRAV18-201ENST00000390446 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
TRAV18-201ENST00000390446 PKD2Q13563 968 aa16.09■□□□□ 0.17
TRAV18-201ENST00000390446 MLH3Q9UHC1 1453 aa16.09■□□□□ 0.17
TRAV18-201ENST00000390446 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
TRAV18-201ENST00000390446 ZMYM3Q14202 1370 aa16.07■□□□□ 0.16
TRAV18-201ENST00000390446 AGLP35573 1532 aa16.07■□□□□ 0.16
TRAV18-201ENST00000390446 REREQ9P2R6 1566 aa16.07■□□□□ 0.16
TRAV18-201ENST00000390446 ABCA6Q8N139 1617 aa16.07■□□□□ 0.16
TRAV18-201ENST00000390446 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
TRAV18-201ENST00000390446 TOM1O60784 492 aa16.05■□□□□ 0.16
TRAV18-201ENST00000390446 NPATQ14207 1427 aa16.04■□□□□ 0.16
TRAV18-201ENST00000390446 HSPA1LP34931 641 aa16.04■□□□□ 0.16
TRAV18-201ENST00000390446 GGT6Q6P531 493 aa16.04■□□□□ 0.16
TRAV18-201ENST00000390446 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
TRAV18-201ENST00000390446 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
TRAV18-201ENST00000390446 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
TRAV18-201ENST00000390446 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
TRAV18-201ENST00000390446 ABCC1P33527 1531 aa15.99■□□□□ 0.15
TRAV18-201ENST00000390446 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
TRAV18-201ENST00000390446 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
TRAV18-201ENST00000390446 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.15
TRAV18-201ENST00000390446 KIDINS220Q9ULH0 1771 aa15.96■□□□□ 0.15
TRAV18-201ENST00000390446 PLA2R1Q13018 1463 aa15.96■□□□□ 0.14
TRAV18-201ENST00000390446 MROH2AA6NES4 1674 aa15.95■□□□□ 0.14
TRAV18-201ENST00000390446 PREX2Q70Z35 1606 aa15.95■□□□□ 0.14
TRAV18-201ENST00000390446 MED1Q15648 1581 aaPredicted RBP15.95■□□□□ 0.14
TRAV18-201ENST00000390446 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
TRAV18-201ENST00000390446 CEP170BQ9Y4F5 1589 aaPredicted RBP15.93■□□□□ 0.14
TRAV18-201ENST00000390446 CFDP1Q9UEE9 299 aaPredicted RBP15.92■□□□□ 0.14
TRAV18-201ENST00000390446 MYO3AQ8NEV4 1616 aa15.92■□□□□ 0.14
TRAV18-201ENST00000390446 PTPRKQ15262 1439 aa15.92■□□□□ 0.14
TRAV18-201ENST00000390446 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
TRAV18-201ENST00000390446 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
TRAV18-201ENST00000390446 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
TRAV18-201ENST00000390446 A2MP01023 1474 aa15.9■□□□□ 0.14
TRAV18-201ENST00000390446 ANKLE2Q86XL3 938 aa15.89■□□□□ 0.13
TRAV18-201ENST00000390446 SYCP2Q9BX26 1530 aa15.89■□□□□ 0.13
TRAV18-201ENST00000390446 ZNF142P52746 1687 aaPredicted RBP15.88■□□□□ 0.13
TRAV18-201ENST00000390446 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
TRAV18-201ENST00000390446 LRRIQ1Q96JM4 1722 aa15.87■□□□□ 0.13
TRAV18-201ENST00000390446 CPS1P31327 1500 aa15.87■□□□□ 0.13
TRAV18-201ENST00000390446 ATP7AQ04656 1500 aa15.87■□□□□ 0.13
TRAV18-201ENST00000390446 SHANK2Q9UPX8 1470 aa15.86■□□□□ 0.13
TRAV18-201ENST00000390446 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
TRAV18-201ENST00000390446 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
TRAV18-201ENST00000390446 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
TRAV18-201ENST00000390446 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
TRAV18-201ENST00000390446 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
TRAV18-201ENST00000390446 TNRQ92752 1358 aa15.84■□□□□ 0.13
TRAV18-201ENST00000390446 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
TRAV18-201ENST00000390446 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.12
TRAV18-201ENST00000390446 KIF3BO15066 747 aa15.82■□□□□ 0.12
TRAV18-201ENST00000390446 WASHC2CQ9Y4E1 1318 aa15.82■□□□□ 0.12
TRAV18-201ENST00000390446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms