RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
TRBV28-201ENST00000390400 PSEN1P49768 467 aa11.97□□□□□ -0.49
TRBV28-201ENST00000390400 MYT1Q01538 1121 aa11.97□□□□□ -0.49
TRBV28-201ENST00000390400 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
TRBV28-201ENST00000390400 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
TRBV28-201ENST00000390400 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
TRBV28-201ENST00000390400 TDRD9Q8NDG6 1382 aaKnown RBP11.93□□□□□ -0.5
TRBV28-201ENST00000390400 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
TRBV28-201ENST00000390400 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
TRBV28-201ENST00000390400 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRBV28-201ENST00000390400 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
TRBV28-201ENST00000390400 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
TRBV28-201ENST00000390400 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRBV28-201ENST00000390400 GAPVD1Q14C86 1478 aa11.91□□□□□ -0.5
TRBV28-201ENST00000390400 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
TRBV28-201ENST00000390400 EEA1Q15075 1411 aa11.89□□□□□ -0.51
TRBV28-201ENST00000390400 MAP3K13O43283 966 aa11.89□□□□□ -0.51
TRBV28-201ENST00000390400 EFCAB3Q8N7B9 438 aa11.88□□□□□ -0.51
TRBV28-201ENST00000390400 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
TRBV28-201ENST00000390400 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
TRBV28-201ENST00000390400 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
TRBV28-201ENST00000390400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRBV28-201ENST00000390400 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
TRBV28-201ENST00000390400 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
TRBV28-201ENST00000390400 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
TRBV28-201ENST00000390400 P3H3Q8IVL6 736 aa11.85□□□□□ -0.51
TRBV28-201ENST00000390400 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
TRBV28-201ENST00000390400 IGF1RP08069 1367 aa11.83□□□□□ -0.52
TRBV28-201ENST00000390400 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
TRBV28-201ENST00000390400 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
TRBV28-201ENST00000390400 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
TRBV28-201ENST00000390400 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
TRBV28-201ENST00000390400 MAGI1Q96QZ7 1491 aaPredicted RBP11.82□□□□□ -0.52
TRBV28-201ENST00000390400 CUL7Q14999 1698 aa11.81□□□□□ -0.52
TRBV28-201ENST00000390400 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
TRBV28-201ENST00000390400 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
TRBV28-201ENST00000390400 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
TRBV28-201ENST00000390400 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
TRBV28-201ENST00000390400 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
TRBV28-201ENST00000390400 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
TRBV28-201ENST00000390400 NCKAP5LQ9HCH0 1330 aa11.77□□□□□ -0.53
TRBV28-201ENST00000390400 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
TRBV28-201ENST00000390400 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
TRBV28-201ENST00000390400 NLRP6P59044 892 aa11.75□□□□□ -0.53
TRBV28-201ENST00000390400 KIF21BO75037 1637 aa11.75□□□□□ -0.53
TRBV28-201ENST00000390400 CHMP7Q8WUX9 453 aaPredicted RBP11.74□□□□□ -0.53
TRBV28-201ENST00000390400 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
TRBV28-201ENST00000390400 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
TRBV28-201ENST00000390400 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
TRBV28-201ENST00000390400 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
TRBV28-201ENST00000390400 CHD1O14646 1710 aa11.73□□□□□ -0.53
TRBV28-201ENST00000390400 SOX12O15370 315 aa11.73□□□□□ -0.53
TRBV28-201ENST00000390400 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
TRBV28-201ENST00000390400 SEMA3EO15041 775 aa11.72□□□□□ -0.53
TRBV28-201ENST00000390400 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
TRBV28-201ENST00000390400 E2F4Q16254 413 aa11.71□□□□□ -0.53
TRBV28-201ENST00000390400 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
TRBV28-201ENST00000390400 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
TRBV28-201ENST00000390400 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
TRBV28-201ENST00000390400 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
TRBV28-201ENST00000390400 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
TRBV28-201ENST00000390400 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
TRBV28-201ENST00000390400 ZC3H15Q8WU90 426 aaKnown RBP11.67□□□□□ -0.54
TRBV28-201ENST00000390400 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
TRBV28-201ENST00000390400 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
TRBV28-201ENST00000390400 NUP160Q12769 1436 aa11.65□□□□□ -0.54
TRBV28-201ENST00000390400 CEP170Q5SW79 1584 aa11.64□□□□□ -0.55
TRBV28-201ENST00000390400 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
TRBV28-201ENST00000390400 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
TRBV28-201ENST00000390400 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
TRBV28-201ENST00000390400 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
TRBV28-201ENST00000390400 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
TRBV28-201ENST00000390400 MFSD10Q14728 455 aa11.63□□□□□ -0.55
TRBV28-201ENST00000390400 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
TRBV28-201ENST00000390400 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
TRBV28-201ENST00000390400 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
TRBV28-201ENST00000390400 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
TRBV28-201ENST00000390400 IQGAP2Q13576 1575 aa11.59□□□□□ -0.55
TRBV28-201ENST00000390400 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
TRBV28-201ENST00000390400 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
TRBV28-201ENST00000390400 CLASP1Q7Z460 1538 aa11.59□□□□□ -0.55
TRBV28-201ENST00000390400 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
TRBV28-201ENST00000390400 PDE4AP27815 886 aa11.57□□□□□ -0.56
TRBV28-201ENST00000390400 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
TRBV28-201ENST00000390400 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
TRBV28-201ENST00000390400 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
TRBV28-201ENST00000390400 ARIH1Q9Y4X5 557 aaPredicted RBP11.53□□□□□ -0.56
TRBV28-201ENST00000390400 UGGT2Q9NYU1 1516 aa11.52□□□□□ -0.57
TRBV28-201ENST00000390400 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
TRBV28-201ENST00000390400 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
TRBV28-201ENST00000390400 ZMYND10O75800 440 aa11.51□□□□□ -0.57
TRBV28-201ENST00000390400 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
TRBV28-201ENST00000390400 CEP162Q5TB80 1403 aa11.51□□□□□ -0.57
TRBV28-201ENST00000390400 MLLT3P42568 568 aaPredicted RBP11.5□□□□□ -0.57
TRBV28-201ENST00000390400 CLIP1P30622 1438 aa11.5□□□□□ -0.57
TRBV28-201ENST00000390400 PRG4Q92954 1404 aaPredicted RBP11.5□□□□□ -0.57
TRBV28-201ENST00000390400 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
TRBV28-201ENST00000390400 CARMIL2Q6F5E8 1435 aa11.49□□□□□ -0.57
TRBV28-201ENST00000390400 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
TRBV28-201ENST00000390400 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms