RNA–Protein interactions for RNA: ENST00000389900.8

RNF216-201, Transcript of ring finger protein 216, humanhuman

TSL 1 (best)

Gene RNF216, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-201ENST00000389900 PRDM4Q9UKN5 801 aa12.55□□□□□ -0.4
RNF216-201ENST00000389900 BRPF3Q9ULD4 1205 aa12.54□□□□□ -0.4
RNF216-201ENST00000389900 RGS3P49796 1198 aa12.53□□□□□ -0.4
RNF216-201ENST00000389900 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
RNF216-201ENST00000389900 IGF1RP08069 1367 aa12.53□□□□□ -0.4
RNF216-201ENST00000389900 CARMIL1Q5VZK9 1371 aa12.52□□□□□ -0.4
RNF216-201ENST00000389900 FKBP8Q14318 412 aa12.51□□□□□ -0.41
RNF216-201ENST00000389900 RAD54L2Q9Y4B4 1467 aa12.51□□□□□ -0.41
RNF216-201ENST00000389900 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
RNF216-201ENST00000389900 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
RNF216-201ENST00000389900 PRDM10Q9NQV6 1147 aa12.51□□□□□ -0.41
RNF216-201ENST00000389900 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
RNF216-201ENST00000389900 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
RNF216-201ENST00000389900 CFAP44Q96MT7 982 aa12.5□□□□□ -0.41
RNF216-201ENST00000389900 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
RNF216-201ENST00000389900 CHD1O14646 1710 aa12.5□□□□□ -0.41
RNF216-201ENST00000389900 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
RNF216-201ENST00000389900 IGSF3O75054 1194 aa12.48□□□□□ -0.41
RNF216-201ENST00000389900 FOXD1Q16676 465 aa12.48□□□□□ -0.41
RNF216-201ENST00000389900 FAM43AQ8N2R8 423 aa12.48□□□□□ -0.41
RNF216-201ENST00000389900 WASHC2CQ9Y4E1 1318 aa12.47□□□□□ -0.41
RNF216-201ENST00000389900 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
RNF216-201ENST00000389900 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
RNF216-201ENST00000389900 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
RNF216-201ENST00000389900 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
RNF216-201ENST00000389900 ITGAEP38570 1179 aa12.46□□□□□ -0.42
RNF216-201ENST00000389900 FBLN2P98095 1184 aa12.45□□□□□ -0.42
RNF216-201ENST00000389900 ARAP1Q96P48 1450 aa12.44□□□□□ -0.42
RNF216-201ENST00000389900 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
RNF216-201ENST00000389900 KCNG1Q9UIX4 513 aa12.44□□□□□ -0.42
RNF216-201ENST00000389900 NEFMP07197 916 aa12.42□□□□□ -0.42
RNF216-201ENST00000389900 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
RNF216-201ENST00000389900 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
RNF216-201ENST00000389900 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.42□□□□□ -0.42
RNF216-201ENST00000389900 ARID4BQ4LE39 1312 aaPredicted RBP12.41□□□□□ -0.42
RNF216-201ENST00000389900 CUL7Q14999 1698 aa12.41□□□□□ -0.42
RNF216-201ENST00000389900 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
RNF216-201ENST00000389900 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
RNF216-201ENST00000389900 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
RNF216-201ENST00000389900 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
RNF216-201ENST00000389900 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
RNF216-201ENST00000389900 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
RNF216-201ENST00000389900 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
RNF216-201ENST00000389900 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
RNF216-201ENST00000389900 ZNF830Q96NB3 372 aaPredicted RBP12.37□□□□□ -0.43
RNF216-201ENST00000389900 USP35Q9P2H5 1018 aa12.37□□□□□ -0.43
RNF216-201ENST00000389900 ARHGAP35Q9NRY4 1499 aa12.36□□□□□ -0.43
RNF216-201ENST00000389900 ABCA5Q8WWZ7 1642 aa12.34□□□□□ -0.43
RNF216-201ENST00000389900 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
RNF216-201ENST00000389900 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
RNF216-201ENST00000389900 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
RNF216-201ENST00000389900 CENPJQ9HC77 1338 aaPredicted RBP12.33□□□□□ -0.44
RNF216-201ENST00000389900 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
RNF216-201ENST00000389900 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
RNF216-201ENST00000389900 GRIN2BQ13224 1484 aa12.33□□□□□ -0.44
RNF216-201ENST00000389900 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
RNF216-201ENST00000389900 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
RNF216-201ENST00000389900 TMED8Q6PL24 325 aaPredicted RBP12.31□□□□□ -0.44
RNF216-201ENST00000389900 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
RNF216-201ENST00000389900 FHAD1B1AJZ9 1412 aa12.31□□□□□ -0.44
RNF216-201ENST00000389900 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
RNF216-201ENST00000389900 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
RNF216-201ENST00000389900 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
RNF216-201ENST00000389900 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
RNF216-201ENST00000389900 FAM193AP78312 1265 aa12.29□□□□□ -0.44
RNF216-201ENST00000389900 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
RNF216-201ENST00000389900 VGLL3A8MV65 326 aa12.28□□□□□ -0.44
RNF216-201ENST00000389900 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
RNF216-201ENST00000389900 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.44
RNF216-201ENST00000389900 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.44
RNF216-201ENST00000389900 TMEM51Q9NW97 253 aa12.27□□□□□ -0.44
RNF216-201ENST00000389900 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.45
RNF216-201ENST00000389900 CLSTN1O94985 981 aa12.26□□□□□ -0.45
RNF216-201ENST00000389900 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
RNF216-201ENST00000389900 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
RNF216-201ENST00000389900 DHX57Q6P158 1386 aaKnown RBP12.25□□□□□ -0.45
RNF216-201ENST00000389900 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
RNF216-201ENST00000389900 FAM43BQ6ZT52 329 aaPredicted RBP12.25□□□□□ -0.45
RNF216-201ENST00000389900 PLCD4Q9BRC7 762 aa12.25□□□□□ -0.45
RNF216-201ENST00000389900 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
RNF216-201ENST00000389900 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
RNF216-201ENST00000389900 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
RNF216-201ENST00000389900 FHOD3Q2V2M9 1422 aa12.24□□□□□ -0.45
RNF216-201ENST00000389900 GSE1Q14687 1217 aa12.24□□□□□ -0.45
RNF216-201ENST00000389900 CLGNO14967 610 aa12.23□□□□□ -0.45
RNF216-201ENST00000389900 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
RNF216-201ENST00000389900 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
RNF216-201ENST00000389900 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.46
RNF216-201ENST00000389900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■■□ 19.8
RNF216-201ENST00000389900 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
RNF216-201ENST00000389900 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
RNF216-201ENST00000389900 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
RNF216-201ENST00000389900 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
RNF216-201ENST00000389900 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
RNF216-201ENST00000389900 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
RNF216-201ENST00000389900 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
RNF216-201ENST00000389900 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
RNF216-201ENST00000389900 PTMSP20962 102 aa12.18□□□□□ -0.46
RNF216-201ENST00000389900 ZHX1Q9UKY1 873 aaPredicted RBP12.18□□□□□ -0.46
RNF216-201ENST00000389900 FYCO1Q9BQS8 1478 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms