RNA–Protein interactions for RNA: ENST00000383829.6

BRPF1-201, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-201ENST00000383829 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.16
BRPF1-201ENST00000383829 MS4A1P11836 297 aa22.31■■□□□ 1.16
BRPF1-201ENST00000383829 ARXQ96QS3 562 aa22.31■■□□□ 1.16
BRPF1-201ENST00000383829 RCAN3Q9UKA8 241 aa22.3■■□□□ 1.16
BRPF1-201ENST00000383829 LRRC9Q6ZRR7 1453 aa22.3■■□□□ 1.16
BRPF1-201ENST00000383829 JPH4Q96JJ6 628 aa22.3■■□□□ 1.16
BRPF1-201ENST00000383829 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
BRPF1-201ENST00000383829 PHLDB1Q86UU1 1377 aa22.29■■□□□ 1.16
BRPF1-201ENST00000383829 HNRNPMP52272 730 aaKnown RBP eCLIP22.28■■□□□ 1.16
BRPF1-201ENST00000383829 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
BRPF1-201ENST00000383829 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
BRPF1-201ENST00000383829 NLRP13Q86W25 1043 aa22.26■■□□□ 1.15
BRPF1-201ENST00000383829 LAS1LQ9Y4W2 734 aaKnown RBP22.26■■□□□ 1.15
BRPF1-201ENST00000383829 RRBP1Q9P2E9 1410 aaKnown RBP22.26■■□□□ 1.15
BRPF1-201ENST00000383829 MORC1Q86VD1 984 aa22.25■■□□□ 1.15
BRPF1-201ENST00000383829 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
BRPF1-201ENST00000383829 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
BRPF1-201ENST00000383829 U2SURPO15042 1029 aaKnown RBP22.24■■□□□ 1.15
BRPF1-201ENST00000383829 PNNQ9H307 717 aaKnown RBP22.24■■□□□ 1.15
BRPF1-201ENST00000383829 MYOM3Q5VTT5 1437 aa22.24■■□□□ 1.15
BRPF1-201ENST00000383829 CHMP4BQ9H444 224 aaKnown RBP22.24■■□□□ 1.15
BRPF1-201ENST00000383829 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
BRPF1-201ENST00000383829 CFTRP13569 1480 aa22.22■■□□□ 1.15
BRPF1-201ENST00000383829 UACAQ9BZF9 1416 aa22.22■■□□□ 1.15
BRPF1-201ENST00000383829 CUX1P39880 1505 aa22.21■■□□□ 1.15
BRPF1-201ENST00000383829 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
BRPF1-201ENST00000383829 GOLGA6L22H0YM25 854 aa22.2■■□□□ 1.14
BRPF1-201ENST00000383829 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
BRPF1-201ENST00000383829 TCERG1O14776 1098 aaKnown RBP22.19■■□□□ 1.14
BRPF1-201ENST00000383829 KIF15Q9NS87 1388 aa22.19■■□□□ 1.14
BRPF1-201ENST00000383829 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
BRPF1-201ENST00000383829 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
BRPF1-201ENST00000383829 GGT6Q6P531 493 aa22.16■■□□□ 1.14
BRPF1-201ENST00000383829 EIF3AQ14152 1382 aaKnown RBP22.16■■□□□ 1.14
BRPF1-201ENST00000383829 SRPK2P78362 688 aaKnown RBP22.15■■□□□ 1.14
BRPF1-201ENST00000383829 C14orf37Q86TY3 774 aa22.15■■□□□ 1.14
BRPF1-201ENST00000383829 ZBED9Q6R2W3 1325 aa22.14■■□□□ 1.13
BRPF1-201ENST00000383829 MYBBP1AQ9BQG0 1328 aaKnown RBP22.14■■□□□ 1.13
BRPF1-201ENST00000383829 CCDC144AA2RUR9 1427 aa22.13■■□□□ 1.13
BRPF1-201ENST00000383829 USP47Q96K76 1375 aa22.13■■□□□ 1.13
BRPF1-201ENST00000383829 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
BRPF1-201ENST00000383829 CASC1Q6TDU7 716 aa22.12■■□□□ 1.13
BRPF1-201ENST00000383829 SPAG9O60271 1321 aaKnown RBP22.12■■□□□ 1.13
BRPF1-201ENST00000383829 KIF3BO15066 747 aa22.11■■□□□ 1.13
BRPF1-201ENST00000383829 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
BRPF1-201ENST00000383829 NCOA2Q15596 1464 aa22.09■■□□□ 1.13
BRPF1-201ENST00000383829 GOLGA2Q08379 1002 aa22.08■■□□□ 1.13
BRPF1-201ENST00000383829 TRIM44Q96DX7 344 aaPredicted RBP22.08■■□□□ 1.13
BRPF1-201ENST00000383829 SAFB2Q14151 953 aaKnown RBP eCLIP22.07■■□□□ 1.12
BRPF1-201ENST00000383829 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
BRPF1-201ENST00000383829 ZBTB7CA1YPR0 619 aa22.06■■□□□ 1.12
BRPF1-201ENST00000383829 NCLP19338 710 aaKnown RBP22.06■■□□□ 1.12
BRPF1-201ENST00000383829 PTPRGP23470 1445 aa22.05■■□□□ 1.12
BRPF1-201ENST00000383829 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
BRPF1-201ENST00000383829 GLIPR1L2Q4G1C9 344 aa22.04■■□□□ 1.12
BRPF1-201ENST00000383829 U2AF1L5P0DN76 240 aaPredicted RBP22.03■■□□□ 1.12
BRPF1-201ENST00000383829 U2AF1Q01081 240 aaKnown RBP eCLIP22.03■■□□□ 1.12
BRPF1-201ENST00000383829 CCDC7Q96M83 1385 aa22.03■■□□□ 1.12
BRPF1-201ENST00000383829 DEKP35659 375 aaKnown RBP22.03■■□□□ 1.12
BRPF1-201ENST00000383829 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
BRPF1-201ENST00000383829 EFCAB5A4FU69 1503 aa22.02■■□□□ 1.12
BRPF1-201ENST00000383829 PANK3Q9H999 370 aa22.01■■□□□ 1.11
BRPF1-201ENST00000383829 STK26Q9P289 416 aa22.01■■□□□ 1.11
BRPF1-201ENST00000383829 IPO8O15397 1037 aaKnown RBP22■■□□□ 1.11
BRPF1-201ENST00000383829 HAP1P54257 671 aaPredicted RBP22■■□□□ 1.11
BRPF1-201ENST00000383829 IPO9Q96P70 1041 aaKnown RBP22■■□□□ 1.11
BRPF1-201ENST00000383829 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
BRPF1-201ENST00000383829 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
BRPF1-201ENST00000383829 KIF7Q2M1P5 1343 aa21.97■■□□□ 1.11
BRPF1-201ENST00000383829 HSP90AB1P08238 724 aaKnown RBP21.97■■□□□ 1.11
BRPF1-201ENST00000383829 RWDD1Q9H446 243 aaPredicted RBP21.97■■□□□ 1.11
BRPF1-201ENST00000383829 TIAM1Q13009 1591 aa21.97■■□□□ 1.11
BRPF1-201ENST00000383829 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
BRPF1-201ENST00000383829 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
BRPF1-201ENST00000383829 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.11e-6■■■■□ 25.1
BRPF1-201ENST00000383829 WASHC2AQ641Q2 1341 aa21.93■■□□□ 1.1
BRPF1-201ENST00000383829 CALD1Q05682 793 aaKnown RBP21.93■■□□□ 1.1
BRPF1-201ENST00000383829 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
BRPF1-201ENST00000383829 CCDC146Q8IYE0 955 aa21.92■■□□□ 1.1
BRPF1-201ENST00000383829 MLECQ14165 292 aa21.91■■□□□ 1.1
BRPF1-201ENST00000383829 ANKRD50Q9ULJ7 1429 aa21.91■■□□□ 1.1
BRPF1-201ENST00000383829 RRP1P56182 461 aaKnown RBP21.91■■□□□ 1.1
BRPF1-201ENST00000383829 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
BRPF1-201ENST00000383829 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
BRPF1-201ENST00000383829 TERF2IPQ9NYB0 399 aa21.9■■□□□ 1.1
BRPF1-201ENST00000383829 HFM1A2PYH4 1435 aa21.9■■□□□ 1.1
BRPF1-201ENST00000383829 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
BRPF1-201ENST00000383829 WASHC2CQ9Y4E1 1318 aa21.89■■□□□ 1.09
BRPF1-201ENST00000383829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.09
BRPF1-201ENST00000383829 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
BRPF1-201ENST00000383829 MIA2Q96PC5 1412 aa21.87■■□□□ 1.09
BRPF1-201ENST00000383829 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
BRPF1-201ENST00000383829 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
BRPF1-201ENST00000383829 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
BRPF1-201ENST00000383829 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
BRPF1-201ENST00000383829 TRAK1Q9UPV9 953 aa21.85■■□□□ 1.09
BRPF1-201ENST00000383829 EXOC6Q8TAG9 804 aa21.85■■□□□ 1.09
BRPF1-201ENST00000383829 SMC4Q9NTJ3 1288 aa21.84■■□□□ 1.09
BRPF1-201ENST00000383829 STAC3Q96MF2 364 aa21.83■■□□□ 1.09
BRPF1-201ENST00000383829 RTN4Q9NQC3 1192 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms