RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 KDM6BO15054 1643 aa18.15■□□□□ 0.5
EIF3CL-201ENST00000380876 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
EIF3CL-201ENST00000380876 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
EIF3CL-201ENST00000380876 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
EIF3CL-201ENST00000380876 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
EIF3CL-201ENST00000380876 SMG6Q86US8 1419 aaKnown RBP18.1■□□□□ 0.49
EIF3CL-201ENST00000380876 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
EIF3CL-201ENST00000380876 PLIN1O60240 522 aa18.09■□□□□ 0.49
EIF3CL-201ENST00000380876 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
EIF3CL-201ENST00000380876 PDE4AP27815 886 aa18.07■□□□□ 0.48
EIF3CL-201ENST00000380876 KDM2AQ9Y2K7 1162 aa18.06■□□□□ 0.48
EIF3CL-201ENST00000380876 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
EIF3CL-201ENST00000380876 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
EIF3CL-201ENST00000380876 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.47
EIF3CL-201ENST00000380876 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
EIF3CL-201ENST00000380876 MAGI3Q5TCQ9 1506 aa18.01■□□□□ 0.47
EIF3CL-201ENST00000380876 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
EIF3CL-201ENST00000380876 ZNF777Q9ULD5 760 aaPredicted RBP18■□□□□ 0.47
EIF3CL-201ENST00000380876 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
EIF3CL-201ENST00000380876 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
EIF3CL-201ENST00000380876 ANKRD30BQ9BXX2 1392 aa18■□□□□ 0.47
EIF3CL-201ENST00000380876 LRRIQ1Q96JM4 1722 aa18■□□□□ 0.47
EIF3CL-201ENST00000380876 EFCAB5A4FU69 1503 aa18■□□□□ 0.47
EIF3CL-201ENST00000380876 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
EIF3CL-201ENST00000380876 USP47Q96K76 1375 aa17.98■□□□□ 0.47
EIF3CL-201ENST00000380876 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
EIF3CL-201ENST00000380876 SPATA31E1Q6ZUB1 1445 aa17.96■□□□□ 0.47
EIF3CL-201ENST00000380876 EIF5BO60841 1220 aaKnown RBP17.96■□□□□ 0.47
EIF3CL-201ENST00000380876 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
EIF3CL-201ENST00000380876 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
EIF3CL-201ENST00000380876 NESP48681 1621 aa17.95■□□□□ 0.46
EIF3CL-201ENST00000380876 CARD11Q9BXL7 1154 aa17.94■□□□□ 0.46
EIF3CL-201ENST00000380876 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
EIF3CL-201ENST00000380876 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
EIF3CL-201ENST00000380876 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
EIF3CL-201ENST00000380876 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
EIF3CL-201ENST00000380876 PKD2Q13563 968 aa17.92■□□□□ 0.46
EIF3CL-201ENST00000380876 RPRD2Q5VT52 1461 aaKnown RBP17.92■□□□□ 0.46
EIF3CL-201ENST00000380876 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
EIF3CL-201ENST00000380876 TEX14Q8IWB6 1497 aa17.91■□□□□ 0.46
EIF3CL-201ENST00000380876 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
EIF3CL-201ENST00000380876 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
EIF3CL-201ENST00000380876 ABCA10Q8WWZ4 1543 aa17.89■□□□□ 0.45
EIF3CL-201ENST00000380876 HECW1Q76N89 1606 aa17.89■□□□□ 0.45
EIF3CL-201ENST00000380876 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
EIF3CL-201ENST00000380876 CC2D1BQ5T0F9 858 aaKnown RBP17.88■□□□□ 0.45
EIF3CL-201ENST00000380876 CTTNBP2Q8WZ74 1663 aa17.88■□□□□ 0.45
EIF3CL-201ENST00000380876 C20orf194Q5TEA3 1177 aa17.87■□□□□ 0.45
EIF3CL-201ENST00000380876 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
EIF3CL-201ENST00000380876 NFKBIBQ15653 356 aa17.85■□□□□ 0.45
EIF3CL-201ENST00000380876 FRAT1Q92837 279 aaPredicted RBP17.85■□□□□ 0.45
EIF3CL-201ENST00000380876 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
EIF3CL-201ENST00000380876 PPM1GO15355 546 aaPredicted RBP17.84■□□□□ 0.45
EIF3CL-201ENST00000380876 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
EIF3CL-201ENST00000380876 GSE1Q14687 1217 aa17.83■□□□□ 0.44
EIF3CL-201ENST00000380876 RGS3P49796 1198 aa17.82■□□□□ 0.44
EIF3CL-201ENST00000380876 MYBBP1AQ9BQG0 1328 aaKnown RBP17.81■□□□□ 0.44
EIF3CL-201ENST00000380876 GCC2Q8IWJ2 1684 aa17.81■□□□□ 0.44
EIF3CL-201ENST00000380876 ABCC5O15440 1437 aa17.81■□□□□ 0.44
EIF3CL-201ENST00000380876 DAPK1P53355 1430 aa17.81■□□□□ 0.44
EIF3CL-201ENST00000380876 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
EIF3CL-201ENST00000380876 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
EIF3CL-201ENST00000380876 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
EIF3CL-201ENST00000380876 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
EIF3CL-201ENST00000380876 ARXQ96QS3 562 aa17.79■□□□□ 0.44
EIF3CL-201ENST00000380876 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
EIF3CL-201ENST00000380876 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
EIF3CL-201ENST00000380876 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
EIF3CL-201ENST00000380876 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
EIF3CL-201ENST00000380876 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
EIF3CL-201ENST00000380876 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
EIF3CL-201ENST00000380876 FRAT2O75474 233 aaPredicted RBP17.77■□□□□ 0.44
EIF3CL-201ENST00000380876 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.44
EIF3CL-201ENST00000380876 ARHGEF11O15085 1522 aa17.77■□□□□ 0.43
EIF3CL-201ENST00000380876 SAMD9Q5K651 1589 aa17.76■□□□□ 0.43
EIF3CL-201ENST00000380876 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
EIF3CL-201ENST00000380876 CUL7Q14999 1698 aa17.76■□□□□ 0.43
EIF3CL-201ENST00000380876 MS4A1P11836 297 aa17.75■□□□□ 0.43
EIF3CL-201ENST00000380876 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
EIF3CL-201ENST00000380876 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
EIF3CL-201ENST00000380876 RALBP1Q15311 655 aa17.73■□□□□ 0.43
EIF3CL-201ENST00000380876 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
EIF3CL-201ENST00000380876 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
EIF3CL-201ENST00000380876 PZPP20742 1482 aa17.72■□□□□ 0.43
EIF3CL-201ENST00000380876 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
EIF3CL-201ENST00000380876 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
EIF3CL-201ENST00000380876 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
EIF3CL-201ENST00000380876 NUP155O75694 1391 aa17.7■□□□□ 0.42
EIF3CL-201ENST00000380876 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
EIF3CL-201ENST00000380876 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
EIF3CL-201ENST00000380876 KTN1Q86UP2 1357 aaKnown RBP17.68■□□□□ 0.42
EIF3CL-201ENST00000380876 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
EIF3CL-201ENST00000380876 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
EIF3CL-201ENST00000380876 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
EIF3CL-201ENST00000380876 PANK3Q9H999 370 aa17.66■□□□□ 0.42
EIF3CL-201ENST00000380876 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
EIF3CL-201ENST00000380876 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
EIF3CL-201ENST00000380876 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
EIF3CL-201ENST00000380876 KDM5CP41229 1560 aa17.65■□□□□ 0.42
EIF3CL-201ENST00000380876 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms