RNA–Protein interactions for RNA: ENST00000380569.6

GCOM1-202, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GCOM1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-202ENST00000380569 GPATCH8Q9UKJ3 1502 aaKnown RBP27.58■■■□□ 2.01
GCOM1-202ENST00000380569 KDM6BO15054 1643 aa27.58■■■□□ 2.01
GCOM1-202ENST00000380569 PPP1R15AO75807 674 aaPredicted RBP27.57■■■□□ 2
GCOM1-202ENST00000380569 PTPRGP23470 1445 aa27.55■■■□□ 2
GCOM1-202ENST00000380569 CFDP1Q9UEE9 299 aaPredicted RBP27.55■■■□□ 2
GCOM1-202ENST00000380569 PLEKHD1A6NEE1 506 aa27.54■■■□□ 2
GCOM1-202ENST00000380569 ACIN1Q9UKV3 1341 aaKnown RBP27.54■■■□□ 2
GCOM1-202ENST00000380569 CENPBP07199 599 aaPredicted RBP27.53■■■□□ 2
GCOM1-202ENST00000380569 CAMSAP2Q08AD1 1489 aa27.53■■■□□ 2
GCOM1-202ENST00000380569 TONSLQ96HA7 1378 aa27.51■■□□□ 1.99
GCOM1-202ENST00000380569 TRIM52Q96A61 297 aa27.49■■□□□ 1.99
GCOM1-202ENST00000380569 DENND4BO75064 1496 aaPredicted RBP27.49■■□□□ 1.99
GCOM1-202ENST00000380569 ABCC10Q5T3U5 1492 aa27.48■■□□□ 1.99
GCOM1-202ENST00000380569 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
GCOM1-202ENST00000380569 CDC42BPAQ5VT25 1732 aa27.45■■□□□ 1.98
GCOM1-202ENST00000380569 MPHOSPH9Q99550 1183 aa27.44■■□□□ 1.98
GCOM1-202ENST00000380569 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
GCOM1-202ENST00000380569 ADGBQ8N7X0 1667 aa27.41■■□□□ 1.98
GCOM1-202ENST00000380569 CROCC2H7BZ55 1655 aa27.41■■□□□ 1.98
GCOM1-202ENST00000380569 ZNF777Q9ULD5 760 aaPredicted RBP27.4■■□□□ 1.98
GCOM1-202ENST00000380569 ADGRL2O95490 1459 aa27.39■■□□□ 1.98
GCOM1-202ENST00000380569 NCOA1Q15788 1441 aa27.39■■□□□ 1.97
GCOM1-202ENST00000380569 KDM5BQ9UGL1 1544 aa27.37■■□□□ 1.97
GCOM1-202ENST00000380569 YTHDC1Q96MU7 727 aaKnown RBP27.32■■□□□ 1.96
GCOM1-202ENST00000380569 ANKRD30AQ9BXX3 1397 aa27.3■■□□□ 1.96
GCOM1-202ENST00000380569 RIMBP3CA6NJZ7 1639 aa27.29■■□□□ 1.96
GCOM1-202ENST00000380569 RIMBP3BA6NNM3 1639 aa27.29■■□□□ 1.96
GCOM1-202ENST00000380569 RIMBP3Q9UFD9 1639 aa27.29■■□□□ 1.96
GCOM1-202ENST00000380569 SHANK2Q9UPX8 1470 aa27.29■■□□□ 1.96
GCOM1-202ENST00000380569 ABCC2Q92887 1545 aa27.28■■□□□ 1.96
GCOM1-202ENST00000380569 ANKRD30BQ9BXX2 1392 aa27.27■■□□□ 1.96
GCOM1-202ENST00000380569 DNAJC5Q9H3Z4 198 aa27.27■■□□□ 1.96
GCOM1-202ENST00000380569 FOXD1Q16676 465 aa27.24■■□□□ 1.95
GCOM1-202ENST00000380569 ARHGEF5Q12774 1597 aa27.24■■□□□ 1.95
GCOM1-202ENST00000380569 SLC4A1APQ9BWU0 796 aaKnown RBP27.23■■□□□ 1.95
GCOM1-202ENST00000380569 PREX2Q70Z35 1606 aa27.23■■□□□ 1.95
GCOM1-202ENST00000380569 PZPP20742 1482 aa27.23■■□□□ 1.95
GCOM1-202ENST00000380569 CDC42BPBQ9Y5S2 1711 aa27.22■■□□□ 1.95
GCOM1-202ENST00000380569 C9orf84Q5VXU9 1444 aa27.22■■□□□ 1.95
GCOM1-202ENST00000380569 RPRD2Q5VT52 1461 aaKnown RBP27.2■■□□□ 1.94
GCOM1-202ENST00000380569 ANKRD50Q9ULJ7 1429 aa27.19■■□□□ 1.94
GCOM1-202ENST00000380569 MBD5Q9P267 1494 aa27.19■■□□□ 1.94
GCOM1-202ENST00000380569 DDX10Q13206 875 aaKnown RBP27.18■■□□□ 1.94
GCOM1-202ENST00000380569 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
GCOM1-202ENST00000380569 TSPY4P0CV99 314 aa27.18■■□□□ 1.94
GCOM1-202ENST00000380569 TSPY10P0CW01 314 aa27.18■■□□□ 1.94
GCOM1-202ENST00000380569 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
GCOM1-202ENST00000380569 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
GCOM1-202ENST00000380569 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.94
GCOM1-202ENST00000380569 UHRF1BP1LA0JNW5 1464 aa27.15■■□□□ 1.94
GCOM1-202ENST00000380569 L3MBTL2Q969R5 705 aa27.15■■□□□ 1.94
GCOM1-202ENST00000380569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.14■■□□□ 1.94
GCOM1-202ENST00000380569 TTC37Q6PGP7 1564 aa27.14■■□□□ 1.94
GCOM1-202ENST00000380569 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
GCOM1-202ENST00000380569 CCDC141Q6ZP82 1450 aa27.12■■□□□ 1.93
GCOM1-202ENST00000380569 KIAA1107Q9UPP5 1409 aa27.1■■□□□ 1.93
GCOM1-202ENST00000380569 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
GCOM1-202ENST00000380569 TEX14Q8IWB6 1497 aa27.09■■□□□ 1.93
GCOM1-202ENST00000380569 ZCCHC11Q5TAX3 1644 aaKnown RBP27.08■■□□□ 1.93
GCOM1-202ENST00000380569 ARHGAP5Q13017 1502 aa27.07■■□□□ 1.92
GCOM1-202ENST00000380569 KIF15Q9NS87 1388 aa27.07■■□□□ 1.92
GCOM1-202ENST00000380569 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
GCOM1-202ENST00000380569 KDM5DQ9BY66 1539 aa27.05■■□□□ 1.92
GCOM1-202ENST00000380569 PKD2Q13563 968 aa27.04■■□□□ 1.92
GCOM1-202ENST00000380569 SYCP2Q9BX26 1530 aa27.03■■□□□ 1.92
GCOM1-202ENST00000380569 MAST1Q9Y2H9 1570 aa27.02■■□□□ 1.92
GCOM1-202ENST00000380569 NUP155O75694 1391 aa27.02■■□□□ 1.92
GCOM1-202ENST00000380569 PLEKHH2Q8IVE3 1493 aa27.02■■□□□ 1.92
GCOM1-202ENST00000380569 HSPA5P11021 654 aaKnown RBP27■■□□□ 1.91
GCOM1-202ENST00000380569 KCNH8Q96L42 1107 aa27■■□□□ 1.91
GCOM1-202ENST00000380569 EIF4G2P78344 907 aaKnown RBP eCLIP26.99■■□□□ 1.91
GCOM1-202ENST00000380569 PLCH2O75038 1416 aa26.97■■□□□ 1.91
GCOM1-202ENST00000380569 NBPF8Q3BBV2 869 aa26.97■■□□□ 1.91
GCOM1-202ENST00000380569 NPM1P06748 294 aaKnown RBP eCLIP26.95■■□□□ 1.9
GCOM1-202ENST00000380569 ANP32CO43423 234 aa26.9■■□□□ 1.9
GCOM1-202ENST00000380569 PLXNC1O60486 1568 aa26.9■■□□□ 1.9
GCOM1-202ENST00000380569 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
GCOM1-202ENST00000380569 ARHGEF12Q9NZN5 1544 aa26.89■■□□□ 1.9
GCOM1-202ENST00000380569 CCER2I3L3R5 266 aa26.88■■□□□ 1.89
GCOM1-202ENST00000380569 WASHC2AQ641Q2 1341 aa26.88■■□□□ 1.89
GCOM1-202ENST00000380569 FAM135AQ9P2D6 1515 aa26.85■■□□□ 1.89
GCOM1-202ENST00000380569 UNC13BO14795 1591 aa26.84■■□□□ 1.89
GCOM1-202ENST00000380569 ABCC1P33527 1531 aa26.84■■□□□ 1.89
GCOM1-202ENST00000380569 ARAP3Q8WWN8 1544 aa26.84■■□□□ 1.89
GCOM1-202ENST00000380569 SPATA31E1Q6ZUB1 1445 aa26.83■■□□□ 1.89
GCOM1-202ENST00000380569 DUOX2Q9NRD8 1548 aa26.81■■□□□ 1.88
GCOM1-202ENST00000380569 WDR7Q9Y4E6 1490 aa26.8■■□□□ 1.88
GCOM1-202ENST00000380569 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
GCOM1-202ENST00000380569 ASXL2Q76L83 1435 aa26.77■■□□□ 1.88
GCOM1-202ENST00000380569 CCDC7Q96M83 1385 aa26.76■■□□□ 1.87
GCOM1-202ENST00000380569 ERBINQ96RT1 1412 aa26.75■■□□□ 1.87
GCOM1-202ENST00000380569 TRAPPC8Q9Y2L5 1435 aa26.75■■□□□ 1.87
GCOM1-202ENST00000380569 C11orf95C9JLR9 678 aaPredicted RBP26.74■■□□□ 1.87
GCOM1-202ENST00000380569 IQGAP3Q86VI3 1631 aa26.74■■□□□ 1.87
GCOM1-202ENST00000380569 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
GCOM1-202ENST00000380569 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
GCOM1-202ENST00000380569 ABCA9Q8IUA7 1624 aa26.71■■□□□ 1.87
GCOM1-202ENST00000380569 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
GCOM1-202ENST00000380569 RTEL1-TNFRSF6BF6WH68 1400 aa26.69■■□□□ 1.86
GCOM1-202ENST00000380569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms