RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 CARMIL2Q6F5E8 1435 aa14.29□□□□□ -0.12
ZNF549-202ENST00000376233 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
ZNF549-202ENST00000376233 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
ZNF549-202ENST00000376233 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
ZNF549-202ENST00000376233 CUL7Q14999 1698 aa14.28□□□□□ -0.12
ZNF549-202ENST00000376233 EHBP1L1Q8N3D4 1523 aa14.27□□□□□ -0.12
ZNF549-202ENST00000376233 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
ZNF549-202ENST00000376233 CHGAP10645 457 aaKnown RBP14.27□□□□□ -0.12
ZNF549-202ENST00000376233 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
ZNF549-202ENST00000376233 EPRSP07814 1512 aaKnown RBP14.26□□□□□ -0.13
ZNF549-202ENST00000376233 KIF7Q2M1P5 1343 aa14.26□□□□□ -0.13
ZNF549-202ENST00000376233 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
ZNF549-202ENST00000376233 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
ZNF549-202ENST00000376233 PRG4Q92954 1404 aaPredicted RBP14.25□□□□□ -0.13
ZNF549-202ENST00000376233 CCDC7Q96M83 1385 aa14.25□□□□□ -0.13
ZNF549-202ENST00000376233 SENP3Q9H4L4 574 aaPredicted RBP14.24□□□□□ -0.13
ZNF549-202ENST00000376233 SUPT6HQ7KZ85 1726 aaKnown RBP14.24□□□□□ -0.13
ZNF549-202ENST00000376233 ST20-MTHFSA0A0A6YYL1 179 aa14.24□□□□□ -0.13
ZNF549-202ENST00000376233 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
ZNF549-202ENST00000376233 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
ZNF549-202ENST00000376233 USP47Q96K76 1375 aa14.21□□□□□ -0.14
ZNF549-202ENST00000376233 ANP32AP39687 249 aaKnown RBP14.2□□□□□ -0.14
ZNF549-202ENST00000376233 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
ZNF549-202ENST00000376233 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
ZNF549-202ENST00000376233 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
ZNF549-202ENST00000376233 NBR1Q14596 966 aa14.19□□□□□ -0.14
ZNF549-202ENST00000376233 CNTLNQ9NXG0 1405 aa14.19□□□□□ -0.14
ZNF549-202ENST00000376233 IQGAP2Q13576 1575 aa14.19□□□□□ -0.14
ZNF549-202ENST00000376233 MIA2Q96PC5 1412 aa14.19□□□□□ -0.14
ZNF549-202ENST00000376233 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
ZNF549-202ENST00000376233 RTL5Q5HYW3 569 aaPredicted RBP14.18□□□□□ -0.14
ZNF549-202ENST00000376233 CFAP43Q8NDM7 1665 aa14.18□□□□□ -0.14
ZNF549-202ENST00000376233 HECW1Q76N89 1606 aa14.18□□□□□ -0.14
ZNF549-202ENST00000376233 DAPK1P53355 1430 aa14.18□□□□□ -0.14
ZNF549-202ENST00000376233 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
ZNF549-202ENST00000376233 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
ZNF549-202ENST00000376233 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
ZNF549-202ENST00000376233 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
ZNF549-202ENST00000376233 ABCC5O15440 1437 aa14.14□□□□□ -0.15
ZNF549-202ENST00000376233 PLB1Q6P1J6 1458 aa14.13□□□□□ -0.15
ZNF549-202ENST00000376233 PTPRGP23470 1445 aa14.13□□□□□ -0.15
ZNF549-202ENST00000376233 ZBED9Q6R2W3 1325 aa14.13□□□□□ -0.15
ZNF549-202ENST00000376233 ANKRD30BQ9BXX2 1392 aa14.13□□□□□ -0.15
ZNF549-202ENST00000376233 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
ZNF549-202ENST00000376233 KIAA0586Q9BVV6 1533 aa14.12□□□□□ -0.15
ZNF549-202ENST00000376233 TROQ12816 1431 aaPredicted RBP14.12□□□□□ -0.15
ZNF549-202ENST00000376233 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
ZNF549-202ENST00000376233 KNSTRNQ9Y448 316 aa14.11□□□□□ -0.15
ZNF549-202ENST00000376233 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
ZNF549-202ENST00000376233 KIF15Q9NS87 1388 aa14.11□□□□□ -0.15
ZNF549-202ENST00000376233 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
ZNF549-202ENST00000376233 TMF1P82094 1093 aa14.09□□□□□ -0.15
ZNF549-202ENST00000376233 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
ZNF549-202ENST00000376233 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
ZNF549-202ENST00000376233 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
ZNF549-202ENST00000376233 CCDC144AA2RUR9 1427 aa14.06□□□□□ -0.16
ZNF549-202ENST00000376233 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
ZNF549-202ENST00000376233 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
ZNF549-202ENST00000376233 NBPF1Q3BBV0 1214 aa14.06□□□□□ -0.16
ZNF549-202ENST00000376233 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
ZNF549-202ENST00000376233 RALBP1Q15311 655 aa14.05□□□□□ -0.16
ZNF549-202ENST00000376233 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
ZNF549-202ENST00000376233 EFCAB2Q5VUJ9 269 aa14.05□□□□□ -0.16
ZNF549-202ENST00000376233 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
ZNF549-202ENST00000376233 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
ZNF549-202ENST00000376233 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
ZNF549-202ENST00000376233 PANK3Q9H999 370 aa14.04□□□□□ -0.16
ZNF549-202ENST00000376233 RCAN3Q9UKA8 241 aa14.04□□□□□ -0.16
ZNF549-202ENST00000376233 NLRP13Q86W25 1043 aa14.03□□□□□ -0.16
ZNF549-202ENST00000376233 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
ZNF549-202ENST00000376233 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
ZNF549-202ENST00000376233 CAMSAP2Q08AD1 1489 aa14.03□□□□□ -0.16
ZNF549-202ENST00000376233 MYBBP1AQ9BQG0 1328 aaKnown RBP14.03□□□□□ -0.16
ZNF549-202ENST00000376233 NEUROD2Q15784 382 aa14.03□□□□□ -0.16
ZNF549-202ENST00000376233 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.16
ZNF549-202ENST00000376233 NUP153P49790 1475 aaKnown RBP14.02□□□□□ -0.16
ZNF549-202ENST00000376233 RPRD2Q5VT52 1461 aaKnown RBP14.02□□□□□ -0.16
ZNF549-202ENST00000376233 RSPH4AQ5TD94 716 aa14.02□□□□□ -0.17
ZNF549-202ENST00000376233 AKNAQ7Z591 1439 aa14.02□□□□□ -0.17
ZNF549-202ENST00000376233 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
ZNF549-202ENST00000376233 SAMD9Q5K651 1589 aa14□□□□□ -0.17
ZNF549-202ENST00000376233 KIF3BO15066 747 aa14□□□□□ -0.17
ZNF549-202ENST00000376233 PLIN1O60240 522 aa14□□□□□ -0.17
ZNF549-202ENST00000376233 BCL11AQ9H165 835 aa14□□□□□ -0.17
ZNF549-202ENST00000376233 NOP58Q9Y2X3 529 aaKnown RBP13.99□□□□□ -0.17
ZNF549-202ENST00000376233 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
ZNF549-202ENST00000376233 TCOF1Q13428 1488 aaKnown RBP13.98□□□□□ -0.17
ZNF549-202ENST00000376233 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
ZNF549-202ENST00000376233 EXOC6Q8TAG9 804 aa13.98□□□□□ -0.17
ZNF549-202ENST00000376233 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
ZNF549-202ENST00000376233 WDR62O43379 1518 aa13.97□□□□□ -0.17
ZNF549-202ENST00000376233 GPATCH8Q9UKJ3 1502 aaKnown RBP13.97□□□□□ -0.17
ZNF549-202ENST00000376233 ADAMTS12P58397 1594 aa13.96□□□□□ -0.17
ZNF549-202ENST00000376233 GGT6Q6P531 493 aa13.96□□□□□ -0.17
ZNF549-202ENST00000376233 AFAP1Q8N556 730 aa13.96□□□□□ -0.18
ZNF549-202ENST00000376233 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.95□□□□□ -0.18
ZNF549-202ENST00000376233 CCDC146Q8IYE0 955 aa13.95□□□□□ -0.18
ZNF549-202ENST00000376233 KDM6BO15054 1643 aa13.95□□□□□ -0.18
ZNF549-202ENST00000376233 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
ZNF549-202ENST00000376233 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms