RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 PKD2Q13563 968 aa18.24■□□□□ 0.51
MCF2L-204ENST00000375608 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■□□□ 12.9
MCF2L-204ENST00000375608 PDE4AP27815 886 aa18.22■□□□□ 0.51
MCF2L-204ENST00000375608 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
MCF2L-204ENST00000375608 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.5
MCF2L-204ENST00000375608 NAIPQ13075 1403 aa18.2■□□□□ 0.5
MCF2L-204ENST00000375608 CFTRP13569 1480 aa18.18■□□□□ 0.5
MCF2L-204ENST00000375608 PCF11O94913 1555 aaKnown RBP18.18■□□□□ 0.5
MCF2L-204ENST00000375608 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
MCF2L-204ENST00000375608 ST20-MTHFSA0A0A6YYL1 179 aa18.17■□□□□ 0.5
MCF2L-204ENST00000375608 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
MCF2L-204ENST00000375608 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
MCF2L-204ENST00000375608 CDCA7LQ96GN5 454 aa18.15■□□□□ 0.5
MCF2L-204ENST00000375608 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-204ENST00000375608 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
MCF2L-204ENST00000375608 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
MCF2L-204ENST00000375608 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
MCF2L-204ENST00000375608 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
MCF2L-204ENST00000375608 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
MCF2L-204ENST00000375608 USP47Q96K76 1375 aa18.11■□□□□ 0.49
MCF2L-204ENST00000375608 NESP48681 1621 aa18.11■□□□□ 0.49
MCF2L-204ENST00000375608 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
MCF2L-204ENST00000375608 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
MCF2L-204ENST00000375608 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
MCF2L-204ENST00000375608 TSPY4P0CV99 314 aa18.08■□□□□ 0.49
MCF2L-204ENST00000375608 TSPY10P0CW01 314 aa18.08■□□□□ 0.49
MCF2L-204ENST00000375608 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
MCF2L-204ENST00000375608 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
MCF2L-204ENST00000375608 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
MCF2L-204ENST00000375608 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
MCF2L-204ENST00000375608 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
MCF2L-204ENST00000375608 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
MCF2L-204ENST00000375608 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
MCF2L-204ENST00000375608 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
MCF2L-204ENST00000375608 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
MCF2L-204ENST00000375608 NUP155O75694 1391 aa18.01■□□□□ 0.47
MCF2L-204ENST00000375608 NCOA1Q15788 1441 aa18■□□□□ 0.47
MCF2L-204ENST00000375608 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
MCF2L-204ENST00000375608 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
MCF2L-204ENST00000375608 NLRP13Q86W25 1043 aa17.99■□□□□ 0.47
MCF2L-204ENST00000375608 SLKQ9H2G2 1235 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-204ENST00000375608 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
MCF2L-204ENST00000375608 BACH2Q9BYV9 841 aa17.98■□□□□ 0.47
MCF2L-204ENST00000375608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■□□□ 13.3
MCF2L-204ENST00000375608 RALBP1Q15311 655 aa17.97■□□□□ 0.47
MCF2L-204ENST00000375608 GSE1Q14687 1217 aa17.97■□□□□ 0.47
MCF2L-204ENST00000375608 NFKBIBQ15653 356 aa17.97■□□□□ 0.47
MCF2L-204ENST00000375608 KTN1Q86UP2 1357 aaKnown RBP17.96■□□□□ 0.47
MCF2L-204ENST00000375608 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
MCF2L-204ENST00000375608 CCDC146Q8IYE0 955 aa17.95■□□□□ 0.46
MCF2L-204ENST00000375608 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-204ENST00000375608 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
MCF2L-204ENST00000375608 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
MCF2L-204ENST00000375608 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-204ENST00000375608 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-204ENST00000375608 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
MCF2L-204ENST00000375608 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
MCF2L-204ENST00000375608 PANK3Q9H999 370 aa17.92■□□□□ 0.46
MCF2L-204ENST00000375608 ANKRD30BQ9BXX2 1392 aa17.92■□□□□ 0.46
MCF2L-204ENST00000375608 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
MCF2L-204ENST00000375608 TNNT2P45379 298 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-204ENST00000375608 USP35Q9P2H5 1018 aa17.91■□□□□ 0.46
MCF2L-204ENST00000375608 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.463e-7■■■■□ 22.6
MCF2L-204ENST00000375608 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-204ENST00000375608 FRAT2O75474 233 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-204ENST00000375608 NBPF1Q3BBV0 1214 aa17.89■□□□□ 0.45
MCF2L-204ENST00000375608 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-204ENST00000375608 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-204ENST00000375608 MS4A1P11836 297 aa17.86■□□□□ 0.45
MCF2L-204ENST00000375608 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
MCF2L-204ENST00000375608 PDE3BQ13370 1112 aa17.85■□□□□ 0.45
MCF2L-204ENST00000375608 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
MCF2L-204ENST00000375608 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
MCF2L-204ENST00000375608 GAPVD1Q14C86 1478 aa17.84■□□□□ 0.45
MCF2L-204ENST00000375608 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
MCF2L-204ENST00000375608 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
MCF2L-204ENST00000375608 TMF1P82094 1093 aa17.82■□□□□ 0.44
MCF2L-204ENST00000375608 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
MCF2L-204ENST00000375608 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
MCF2L-204ENST00000375608 ANKRD30AQ9BXX3 1397 aa17.8■□□□□ 0.44
MCF2L-204ENST00000375608 ARID4BQ4LE39 1312 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-204ENST00000375608 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
MCF2L-204ENST00000375608 BRD4O60885 1362 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-204ENST00000375608 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
MCF2L-204ENST00000375608 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
MCF2L-204ENST00000375608 BECN1Q14457 450 aa17.79■□□□□ 0.44
MCF2L-204ENST00000375608 RPRD2Q5VT52 1461 aaKnown RBP17.79■□□□□ 0.44
MCF2L-204ENST00000375608 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
MCF2L-204ENST00000375608 BCL2L13Q9BXK5 485 aa17.78■□□□□ 0.44
MCF2L-204ENST00000375608 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-204ENST00000375608 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
MCF2L-204ENST00000375608 APAF1O14727 1248 aa17.77■□□□□ 0.43
MCF2L-204ENST00000375608 CENPQQ7L2Z9 268 aaPredicted RBP17.77■□□□□ 0.43
MCF2L-204ENST00000375608 EHBP1L1Q8N3D4 1523 aa17.76■□□□□ 0.43
MCF2L-204ENST00000375608 CFAP43Q8NDM7 1665 aa17.76■□□□□ 0.43
MCF2L-204ENST00000375608 DAPK1P53355 1430 aa17.76■□□□□ 0.43
MCF2L-204ENST00000375608 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
MCF2L-204ENST00000375608 COG6Q9Y2V7 657 aa17.76■□□□□ 0.43
MCF2L-204ENST00000375608 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
MCF2L-204ENST00000375608 SNAPC4Q5SXM2 1469 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms