RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 CNTLNQ9NXG0 1405 aa17.54■□□□□ 0.4
CUL4A-203ENST00000375441 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
CUL4A-203ENST00000375441 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
CUL4A-203ENST00000375441 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
CUL4A-203ENST00000375441 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
CUL4A-203ENST00000375441 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.394e-6■■■□□ 15.2
CUL4A-203ENST00000375441 NBPF8Q3BBV2 869 aa17.5■□□□□ 0.39
CUL4A-203ENST00000375441 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
CUL4A-203ENST00000375441 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
CUL4A-203ENST00000375441 DEKP35659 375 aaKnown RBP17.47■□□□□ 0.39
CUL4A-203ENST00000375441 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
CUL4A-203ENST00000375441 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
CUL4A-203ENST00000375441 NUP155O75694 1391 aa17.46■□□□□ 0.39
CUL4A-203ENST00000375441 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
CUL4A-203ENST00000375441 USP47Q96K76 1375 aa17.44■□□□□ 0.38
CUL4A-203ENST00000375441 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
CUL4A-203ENST00000375441 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
CUL4A-203ENST00000375441 ANKRD30AQ9BXX3 1397 aa17.43■□□□□ 0.38
CUL4A-203ENST00000375441 MSH5O43196 834 aa17.43■□□□□ 0.38
CUL4A-203ENST00000375441 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
CUL4A-203ENST00000375441 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
CUL4A-203ENST00000375441 PTPN23Q9H3S7 1636 aa17.41■□□□□ 0.38
CUL4A-203ENST00000375441 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.38
CUL4A-203ENST00000375441 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.38
CUL4A-203ENST00000375441 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
CUL4A-203ENST00000375441 RALBP1Q15311 655 aa17.38■□□□□ 0.37
CUL4A-203ENST00000375441 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
CUL4A-203ENST00000375441 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
CUL4A-203ENST00000375441 MIA2Q96PC5 1412 aa17.35■□□□□ 0.37
CUL4A-203ENST00000375441 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
CUL4A-203ENST00000375441 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.35■□□□□ 0.37
CUL4A-203ENST00000375441 CUL7Q14999 1698 aa17.35■□□□□ 0.37
CUL4A-203ENST00000375441 HNRNPMP52272 730 aaKnown RBP eCLIP17.34■□□□□ 0.371e-8■■■■■ 89.9
CUL4A-203ENST00000375441 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
CUL4A-203ENST00000375441 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.36
CUL4A-203ENST00000375441 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
CUL4A-203ENST00000375441 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
CUL4A-203ENST00000375441 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
CUL4A-203ENST00000375441 NEFMP07197 916 aa17.32■□□□□ 0.36
CUL4A-203ENST00000375441 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
CUL4A-203ENST00000375441 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
CUL4A-203ENST00000375441 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
CUL4A-203ENST00000375441 EXOC6Q8TAG9 804 aa17.31■□□□□ 0.36
CUL4A-203ENST00000375441 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
CUL4A-203ENST00000375441 TMF1P82094 1093 aa17.3■□□□□ 0.36
CUL4A-203ENST00000375441 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
CUL4A-203ENST00000375441 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
CUL4A-203ENST00000375441 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
CUL4A-203ENST00000375441 DAPK1P53355 1430 aa17.29■□□□□ 0.36
CUL4A-203ENST00000375441 NCOA1Q15788 1441 aa17.29■□□□□ 0.36
CUL4A-203ENST00000375441 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
CUL4A-203ENST00000375441 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
CUL4A-203ENST00000375441 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
CUL4A-203ENST00000375441 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
CUL4A-203ENST00000375441 HECW1Q76N89 1606 aa17.26■□□□□ 0.35
CUL4A-203ENST00000375441 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
CUL4A-203ENST00000375441 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
CUL4A-203ENST00000375441 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
CUL4A-203ENST00000375441 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
CUL4A-203ENST00000375441 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
CUL4A-203ENST00000375441 ARID4BQ4LE39 1312 aaPredicted RBP17.24■□□□□ 0.35
CUL4A-203ENST00000375441 PLIN1O60240 522 aa17.24■□□□□ 0.35
CUL4A-203ENST00000375441 RGS3P49796 1198 aa17.24■□□□□ 0.35
CUL4A-203ENST00000375441 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
CUL4A-203ENST00000375441 ANKRD50Q9ULJ7 1429 aa17.24■□□□□ 0.35
CUL4A-203ENST00000375441 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
CUL4A-203ENST00000375441 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
CUL4A-203ENST00000375441 ROCK1Q13464 1354 aa17.22■□□□□ 0.35
CUL4A-203ENST00000375441 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
CUL4A-203ENST00000375441 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
CUL4A-203ENST00000375441 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
CUL4A-203ENST00000375441 ABCC5O15440 1437 aa17.22■□□□□ 0.35
CUL4A-203ENST00000375441 CDCA8Q53HL2 280 aa17.21■□□□□ 0.35
CUL4A-203ENST00000375441 KIAA1107Q9UPP5 1409 aa17.21■□□□□ 0.35
CUL4A-203ENST00000375441 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
CUL4A-203ENST00000375441 PDE4AP27815 886 aa17.21■□□□□ 0.35
CUL4A-203ENST00000375441 PANK3Q9H999 370 aa17.2■□□□□ 0.34
CUL4A-203ENST00000375441 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
CUL4A-203ENST00000375441 CTTNBP2Q8WZ74 1663 aa17.18■□□□□ 0.34
CUL4A-203ENST00000375441 IQGAP2Q13576 1575 aa17.17■□□□□ 0.34
CUL4A-203ENST00000375441 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
CUL4A-203ENST00000375441 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
CUL4A-203ENST00000375441 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
CUL4A-203ENST00000375441 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.34
CUL4A-203ENST00000375441 NEUROD2Q15784 382 aa17.14■□□□□ 0.33
CUL4A-203ENST00000375441 CRBNQ96SW2 442 aa17.14■□□□□ 0.33
CUL4A-203ENST00000375441 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
CUL4A-203ENST00000375441 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
CUL4A-203ENST00000375441 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
CUL4A-203ENST00000375441 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
CUL4A-203ENST00000375441 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
CUL4A-203ENST00000375441 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
CUL4A-203ENST00000375441 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
CUL4A-203ENST00000375441 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
CUL4A-203ENST00000375441 GOLGA2Q08379 1002 aa17.09■□□□□ 0.33
CUL4A-203ENST00000375441 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
CUL4A-203ENST00000375441 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
CUL4A-203ENST00000375441 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
CUL4A-203ENST00000375441 MS4A1P11836 297 aa17.07■□□□□ 0.32
CUL4A-203ENST00000375441 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms