RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
CSMD2-204ENST00000373380 FTSJ3Q8IY81 847 aaKnown RBP14.16□□□□□ -0.14
CSMD2-204ENST00000373380 L3MBTL2Q969R5 705 aa14.15□□□□□ -0.14
CSMD2-204ENST00000373380 PHLDB1Q86UU1 1377 aa14.15□□□□□ -0.14
CSMD2-204ENST00000373380 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
CSMD2-204ENST00000373380 ERICH6BQ5W0A0 696 aa14.14□□□□□ -0.15
CSMD2-204ENST00000373380 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
CSMD2-204ENST00000373380 TMF1P82094 1093 aa14.13□□□□□ -0.15
CSMD2-204ENST00000373380 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
CSMD2-204ENST00000373380 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
CSMD2-204ENST00000373380 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
CSMD2-204ENST00000373380 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
CSMD2-204ENST00000373380 U2SURPO15042 1029 aaKnown RBP14.1□□□□□ -0.15
CSMD2-204ENST00000373380 TRIM44Q96DX7 344 aaPredicted RBP14.1□□□□□ -0.15
CSMD2-204ENST00000373380 NCLP19338 710 aaKnown RBP14.09□□□□□ -0.15
CSMD2-204ENST00000373380 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
CSMD2-204ENST00000373380 ZBTB7CA1YPR0 619 aa14.09□□□□□ -0.15
CSMD2-204ENST00000373380 C14orf37Q86TY3 774 aa14.08□□□□□ -0.15
CSMD2-204ENST00000373380 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.15
CSMD2-204ENST00000373380 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.15
CSMD2-204ENST00000373380 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.15
CSMD2-204ENST00000373380 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.16
CSMD2-204ENST00000373380 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
CSMD2-204ENST00000373380 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.16
CSMD2-204ENST00000373380 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
CSMD2-204ENST00000373380 NUDCQ9Y266 331 aa14.06□□□□□ -0.16
CSMD2-204ENST00000373380 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
CSMD2-204ENST00000373380 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
CSMD2-204ENST00000373380 GOLGA6L22H0YM25 854 aa14.05□□□□□ -0.16
CSMD2-204ENST00000373380 POGKQ9P215 609 aa14.05□□□□□ -0.16
CSMD2-204ENST00000373380 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
CSMD2-204ENST00000373380 NUP155O75694 1391 aa14.05□□□□□ -0.16
CSMD2-204ENST00000373380 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
CSMD2-204ENST00000373380 FGD6Q6ZV73 1430 aa14.04□□□□□ -0.16
CSMD2-204ENST00000373380 NESP48681 1621 aa14.04□□□□□ -0.16
CSMD2-204ENST00000373380 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
CSMD2-204ENST00000373380 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
CSMD2-204ENST00000373380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.01□□□□□ -0.17
CSMD2-204ENST00000373380 MORC1Q86VD1 984 aa14□□□□□ -0.17
CSMD2-204ENST00000373380 CCDC18Q5T9S5 1454 aa14□□□□□ -0.17
CSMD2-204ENST00000373380 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
CSMD2-204ENST00000373380 ROCK2O75116 1388 aaKnown RBP13.99□□□□□ -0.17
CSMD2-204ENST00000373380 RALBP1Q15311 655 aa13.98□□□□□ -0.17
CSMD2-204ENST00000373380 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
CSMD2-204ENST00000373380 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
CSMD2-204ENST00000373380 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
CSMD2-204ENST00000373380 CUL7Q14999 1698 aa13.96□□□□□ -0.17
CSMD2-204ENST00000373380 SRPK2P78362 688 aaKnown RBP13.96□□□□□ -0.17
CSMD2-204ENST00000373380 ARID4BQ4LE39 1312 aaPredicted RBP13.96□□□□□ -0.17
CSMD2-204ENST00000373380 GGT6Q6P531 493 aa13.96□□□□□ -0.17
CSMD2-204ENST00000373380 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
CSMD2-204ENST00000373380 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.18
CSMD2-204ENST00000373380 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.18
CSMD2-204ENST00000373380 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
CSMD2-204ENST00000373380 UACAQ9BZF9 1416 aa13.95□□□□□ -0.18
CSMD2-204ENST00000373380 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
CSMD2-204ENST00000373380 SOX12O15370 315 aa13.94□□□□□ -0.18
CSMD2-204ENST00000373380 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
CSMD2-204ENST00000373380 NLRP13Q86W25 1043 aa13.94□□□□□ -0.18
CSMD2-204ENST00000373380 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
CSMD2-204ENST00000373380 STK26Q9P289 416 aa13.94□□□□□ -0.18
CSMD2-204ENST00000373380 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
CSMD2-204ENST00000373380 A0A0G2JS52 829 aa13.94□□□□□ -0.18
CSMD2-204ENST00000373380 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
CSMD2-204ENST00000373380 MS4A1P11836 297 aa13.93□□□□□ -0.18
CSMD2-204ENST00000373380 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
CSMD2-204ENST00000373380 IPO9Q96P70 1041 aaKnown RBP13.93□□□□□ -0.18
CSMD2-204ENST00000373380 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
CSMD2-204ENST00000373380 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
CSMD2-204ENST00000373380 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
CSMD2-204ENST00000373380 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
CSMD2-204ENST00000373380 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
CSMD2-204ENST00000373380 CCDC146Q8IYE0 955 aa13.92□□□□□ -0.18
CSMD2-204ENST00000373380 CLUAP1Q96AJ1 413 aa13.91□□□□□ -0.18
CSMD2-204ENST00000373380 DNTTIP2Q5QJE6 756 aaKnown RBP13.9□□□□□ -0.18
CSMD2-204ENST00000373380 HFM1A2PYH4 1435 aa13.9□□□□□ -0.18
CSMD2-204ENST00000373380 PLIN1O60240 522 aa13.89□□□□□ -0.19
CSMD2-204ENST00000373380 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
CSMD2-204ENST00000373380 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
CSMD2-204ENST00000373380 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
CSMD2-204ENST00000373380 KANK1Q14678 1352 aa13.89□□□□□ -0.19
CSMD2-204ENST00000373380 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
CSMD2-204ENST00000373380 APBB1O00213 710 aa13.88□□□□□ -0.19
CSMD2-204ENST00000373380 MLECQ14165 292 aa13.88□□□□□ -0.19
CSMD2-204ENST00000373380 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
CSMD2-204ENST00000373380 GZF1Q9H116 711 aaPredicted RBP13.87□□□□□ -0.19
CSMD2-204ENST00000373380 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
CSMD2-204ENST00000373380 EHBP1L1Q8N3D4 1523 aa13.87□□□□□ -0.19
CSMD2-204ENST00000373380 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
CSMD2-204ENST00000373380 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
CSMD2-204ENST00000373380 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
CSMD2-204ENST00000373380 CHMP4BQ9H444 224 aaKnown RBP13.86□□□□□ -0.19
CSMD2-204ENST00000373380 EFCAB2Q5VUJ9 269 aa13.86□□□□□ -0.19
CSMD2-204ENST00000373380 CARMIL2Q6F5E8 1435 aa13.86□□□□□ -0.19
CSMD2-204ENST00000373380 KIF3BO15066 747 aa13.85□□□□□ -0.19
CSMD2-204ENST00000373380 PANK3Q9H999 370 aa13.85□□□□□ -0.19
CSMD2-204ENST00000373380 PDE3BQ13370 1112 aa13.85□□□□□ -0.19
CSMD2-204ENST00000373380 PNNQ9H307 717 aaKnown RBP13.84□□□□□ -0.19
CSMD2-204ENST00000373380 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
CSMD2-204ENST00000373380 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms