RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
NCDN-203ENST00000373253 CUL7Q14999 1698 aa18.05■□□□□ 0.48
NCDN-203ENST00000373253 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
NCDN-203ENST00000373253 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
NCDN-203ENST00000373253 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
NCDN-203ENST00000373253 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
NCDN-203ENST00000373253 HFM1A2PYH4 1435 aa18.03■□□□□ 0.48
NCDN-203ENST00000373253 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
NCDN-203ENST00000373253 C11orf95C9JLR9 678 aaPredicted RBP18.02■□□□□ 0.48
NCDN-203ENST00000373253 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
NCDN-203ENST00000373253 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
NCDN-203ENST00000373253 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
NCDN-203ENST00000373253 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
NCDN-203ENST00000373253 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
NCDN-203ENST00000373253 KIAA0586Q9BVV6 1533 aa17.97■□□□□ 0.47
NCDN-203ENST00000373253 ERICH6Q7L0X2 663 aa17.96■□□□□ 0.47
NCDN-203ENST00000373253 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
NCDN-203ENST00000373253 EHBP1L1Q8N3D4 1523 aa17.95■□□□□ 0.46
NCDN-203ENST00000373253 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
NCDN-203ENST00000373253 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
NCDN-203ENST00000373253 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
NCDN-203ENST00000373253 NUTM2DQ5VT03 806 aaPredicted RBP17.93■□□□□ 0.46
NCDN-203ENST00000373253 GGT6Q6P531 493 aa17.93■□□□□ 0.46
NCDN-203ENST00000373253 PTPN23Q9H3S7 1636 aa17.93■□□□□ 0.46
NCDN-203ENST00000373253 CTTNBP2Q8WZ74 1663 aa17.92■□□□□ 0.46
NCDN-203ENST00000373253 MAGI3Q5TCQ9 1506 aa17.92■□□□□ 0.46
NCDN-203ENST00000373253 CCER2I3L3R5 266 aa17.91■□□□□ 0.46
NCDN-203ENST00000373253 DAPK1P53355 1430 aa17.91■□□□□ 0.46
NCDN-203ENST00000373253 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
NCDN-203ENST00000373253 KIF3BO15066 747 aa17.9■□□□□ 0.46
NCDN-203ENST00000373253 ABCC5O15440 1437 aa17.9■□□□□ 0.46
NCDN-203ENST00000373253 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.45
NCDN-203ENST00000373253 KIF15Q9NS87 1388 aa17.89■□□□□ 0.45
NCDN-203ENST00000373253 ANKRD50Q9ULJ7 1429 aa17.89■□□□□ 0.45
NCDN-203ENST00000373253 KIF7Q2M1P5 1343 aa17.89■□□□□ 0.45
NCDN-203ENST00000373253 HECW1Q76N89 1606 aa17.89■□□□□ 0.45
NCDN-203ENST00000373253 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.45
NCDN-203ENST00000373253 EFCAB2Q5VUJ9 269 aa17.88■□□□□ 0.45
NCDN-203ENST00000373253 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
NCDN-203ENST00000373253 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
NCDN-203ENST00000373253 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
NCDN-203ENST00000373253 NBPF1Q3BBV0 1214 aa17.87■□□□□ 0.45
NCDN-203ENST00000373253 NUP153P49790 1475 aaKnown RBP17.86■□□□□ 0.45
NCDN-203ENST00000373253 SAFB2Q14151 953 aaKnown RBP eCLIP17.86■□□□□ 0.45
NCDN-203ENST00000373253 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
NCDN-203ENST00000373253 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
NCDN-203ENST00000373253 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
NCDN-203ENST00000373253 USP47Q96K76 1375 aa17.84■□□□□ 0.45
NCDN-203ENST00000373253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.83■□□□□ 0.45
NCDN-203ENST00000373253 MIA2Q96PC5 1412 aa17.82■□□□□ 0.44
NCDN-203ENST00000373253 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
NCDN-203ENST00000373253 SPAG9O60271 1321 aaKnown RBP17.82■□□□□ 0.44
NCDN-203ENST00000373253 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
NCDN-203ENST00000373253 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
NCDN-203ENST00000373253 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
NCDN-203ENST00000373253 MLECQ14165 292 aa17.79■□□□□ 0.44
NCDN-203ENST00000373253 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
NCDN-203ENST00000373253 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
NCDN-203ENST00000373253 ANKRD30BQ9BXX2 1392 aa17.77■□□□□ 0.44
NCDN-203ENST00000373253 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.44
NCDN-203ENST00000373253 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.44
NCDN-203ENST00000373253 CAMSAP2Q08AD1 1489 aa17.77■□□□□ 0.44
NCDN-203ENST00000373253 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
NCDN-203ENST00000373253 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
NCDN-203ENST00000373253 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
NCDN-203ENST00000373253 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
NCDN-203ENST00000373253 TSHZ2Q9NRE2 1034 aa17.75■□□□□ 0.43
NCDN-203ENST00000373253 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
NCDN-203ENST00000373253 PBRM1Q86U86 1689 aa17.75■□□□□ 0.43
NCDN-203ENST00000373253 GPATCH8Q9UKJ3 1502 aaKnown RBP17.74■□□□□ 0.43
NCDN-203ENST00000373253 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
NCDN-203ENST00000373253 MAGI1Q96QZ7 1491 aaPredicted RBP17.73■□□□□ 0.43
NCDN-203ENST00000373253 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
NCDN-203ENST00000373253 SAMD9Q5K651 1589 aa17.73■□□□□ 0.43
NCDN-203ENST00000373253 ATP10BO94823 1461 aa17.73■□□□□ 0.43
NCDN-203ENST00000373253 KDM6BO15054 1643 aa17.73■□□□□ 0.43
NCDN-203ENST00000373253 WDR62O43379 1518 aa17.72■□□□□ 0.43
NCDN-203ENST00000373253 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
NCDN-203ENST00000373253 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
NCDN-203ENST00000373253 STK26Q9P289 416 aa17.7■□□□□ 0.42
NCDN-203ENST00000373253 KIAA0556O60303 1618 aa17.69■□□□□ 0.42
NCDN-203ENST00000373253 PANK3Q9H999 370 aa17.69■□□□□ 0.42
NCDN-203ENST00000373253 WDR43Q15061 677 aaKnown RBP eCLIP17.68■□□□□ 0.42
NCDN-203ENST00000373253 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
NCDN-203ENST00000373253 TMF1P82094 1093 aa17.67■□□□□ 0.42
NCDN-203ENST00000373253 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
NCDN-203ENST00000373253 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
NCDN-203ENST00000373253 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
NCDN-203ENST00000373253 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
NCDN-203ENST00000373253 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
NCDN-203ENST00000373253 CEP170Q5SW79 1584 aa17.63■□□□□ 0.41
NCDN-203ENST00000373253 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
NCDN-203ENST00000373253 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
NCDN-203ENST00000373253 KIF14Q15058 1648 aa17.62■□□□□ 0.41
NCDN-203ENST00000373253 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
NCDN-203ENST00000373253 CCDC146Q8IYE0 955 aa17.62■□□□□ 0.41
NCDN-203ENST00000373253 RAPGEF3O95398 923 aa17.61■□□□□ 0.41
NCDN-203ENST00000373253 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
NCDN-203ENST00000373253 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
NCDN-203ENST00000373253 SCAPERQ9BY12 1400 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms