RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
NUP188-201ENST00000372577 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
NUP188-201ENST00000372577 FOXD1Q16676 465 aa13.56□□□□□ -0.24
NUP188-201ENST00000372577 L3MBTL2Q969R5 705 aa13.56□□□□□ -0.24
NUP188-201ENST00000372577 CFTRP13569 1480 aa13.56□□□□□ -0.24
NUP188-201ENST00000372577 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
NUP188-201ENST00000372577 GOLGA6L22H0YM25 854 aa13.55□□□□□ -0.24
NUP188-201ENST00000372577 NEUROD2Q15784 382 aa13.55□□□□□ -0.24
NUP188-201ENST00000372577 GGT6Q6P531 493 aa13.54□□□□□ -0.24
NUP188-201ENST00000372577 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
NUP188-201ENST00000372577 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
NUP188-201ENST00000372577 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
NUP188-201ENST00000372577 PTPRGP23470 1445 aa13.53□□□□□ -0.24
NUP188-201ENST00000372577 HNRNPMP52272 730 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP188-201ENST00000372577 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
NUP188-201ENST00000372577 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
NUP188-201ENST00000372577 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
NUP188-201ENST00000372577 MYOM3Q5VTT5 1437 aa13.53□□□□□ -0.24
NUP188-201ENST00000372577 UACAQ9BZF9 1416 aa13.52□□□□□ -0.24
NUP188-201ENST00000372577 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.25
NUP188-201ENST00000372577 NCLP19338 710 aaKnown RBP13.51□□□□□ -0.25
NUP188-201ENST00000372577 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
NUP188-201ENST00000372577 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
NUP188-201ENST00000372577 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
NUP188-201ENST00000372577 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
NUP188-201ENST00000372577 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
NUP188-201ENST00000372577 LRRC9Q6ZRR7 1453 aa13.5□□□□□ -0.25
NUP188-201ENST00000372577 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
NUP188-201ENST00000372577 KIF3BO15066 747 aa13.5□□□□□ -0.25
NUP188-201ENST00000372577 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
NUP188-201ENST00000372577 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
NUP188-201ENST00000372577 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
NUP188-201ENST00000372577 PDE3BQ13370 1112 aa13.49□□□□□ -0.25
NUP188-201ENST00000372577 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
NUP188-201ENST00000372577 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
NUP188-201ENST00000372577 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
NUP188-201ENST00000372577 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
NUP188-201ENST00000372577 KIF15Q9NS87 1388 aa13.48□□□□□ -0.25
NUP188-201ENST00000372577 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
NUP188-201ENST00000372577 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
NUP188-201ENST00000372577 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
NUP188-201ENST00000372577 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
NUP188-201ENST00000372577 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
NUP188-201ENST00000372577 SENP3-EIF4A1A0A087X0R7 540 aa13.44□□□□□ -0.26
NUP188-201ENST00000372577 RGS3P49796 1198 aa13.44□□□□□ -0.26
NUP188-201ENST00000372577 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
NUP188-201ENST00000372577 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
NUP188-201ENST00000372577 TERF2IPQ9NYB0 399 aa13.44□□□□□ -0.26
NUP188-201ENST00000372577 MLECQ14165 292 aa13.43□□□□□ -0.26
NUP188-201ENST00000372577 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
NUP188-201ENST00000372577 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
NUP188-201ENST00000372577 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
NUP188-201ENST00000372577 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
NUP188-201ENST00000372577 STK26Q9P289 416 aa13.4□□□□□ -0.26
NUP188-201ENST00000372577 NCOA2Q15596 1464 aa13.4□□□□□ -0.26
NUP188-201ENST00000372577 TCERG1O14776 1098 aaKnown RBP13.39□□□□□ -0.27
NUP188-201ENST00000372577 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
NUP188-201ENST00000372577 SAFB2Q14151 953 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUP188-201ENST00000372577 TRIM44Q96DX7 344 aaPredicted RBP13.39□□□□□ -0.27
NUP188-201ENST00000372577 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
NUP188-201ENST00000372577 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■□□□□ 9.8
NUP188-201ENST00000372577 USP47Q96K76 1375 aa13.38□□□□□ -0.27
NUP188-201ENST00000372577 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
NUP188-201ENST00000372577 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
NUP188-201ENST00000372577 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
NUP188-201ENST00000372577 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
NUP188-201ENST00000372577 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
NUP188-201ENST00000372577 EHBP1L1Q8N3D4 1523 aa13.37□□□□□ -0.27
NUP188-201ENST00000372577 A0A0G2JS52 829 aa13.37□□□□□ -0.27
NUP188-201ENST00000372577 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
NUP188-201ENST00000372577 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
NUP188-201ENST00000372577 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.277e-7■■■■■ 37.3
NUP188-201ENST00000372577 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
NUP188-201ENST00000372577 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
NUP188-201ENST00000372577 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
NUP188-201ENST00000372577 GLIPR1L2Q4G1C9 344 aa13.35□□□□□ -0.27
NUP188-201ENST00000372577 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
NUP188-201ENST00000372577 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
NUP188-201ENST00000372577 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
NUP188-201ENST00000372577 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
NUP188-201ENST00000372577 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
NUP188-201ENST00000372577 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
NUP188-201ENST00000372577 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
NUP188-201ENST00000372577 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
NUP188-201ENST00000372577 HSCBQ8IWL3 235 aa13.34□□□□□ -0.27
NUP188-201ENST00000372577 NGEFQ8N5V2 710 aa13.34□□□□□ -0.27
NUP188-201ENST00000372577 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
NUP188-201ENST00000372577 EID1Q9Y6B2 187 aa13.34□□□□□ -0.27
NUP188-201ENST00000372577 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
NUP188-201ENST00000372577 ARXQ96QS3 562 aa13.33□□□□□ -0.27
NUP188-201ENST00000372577 MCCP23508 829 aa13.33□□□□□ -0.28
NUP188-201ENST00000372577 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
NUP188-201ENST00000372577 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
NUP188-201ENST00000372577 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
NUP188-201ENST00000372577 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
NUP188-201ENST00000372577 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
NUP188-201ENST00000372577 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
NUP188-201ENST00000372577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.289e-6■□□□□ 9.6
NUP188-201ENST00000372577 ZRSR1Q15695 479 aaKnown RBP13.3□□□□□ -0.28
NUP188-201ENST00000372577 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms