RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 L1TD1Q5T7N2 865 aaKnown RBP21.13■□□□□ 0.97
PHACTR3-204ENST00000371015 BACH2Q9BYV9 841 aa21.13■□□□□ 0.97
PHACTR3-204ENST00000371015 CLCN1P35523 988 aa21.13■□□□□ 0.97
PHACTR3-204ENST00000371015 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 PDE4AP27815 886 aa21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 NPM2Q86SE8 214 aaKnown RBP21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 PDCL3Q9H2J4 239 aa21.12■□□□□ 0.97
PHACTR3-204ENST00000371015 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
PHACTR3-204ENST00000371015 RRAGDQ9NQL2 400 aaPredicted RBP21.11■□□□□ 0.97
PHACTR3-204ENST00000371015 CUL7Q14999 1698 aa21.07■□□□□ 0.96
PHACTR3-204ENST00000371015 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
PHACTR3-204ENST00000371015 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
PHACTR3-204ENST00000371015 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
PHACTR3-204ENST00000371015 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
PHACTR3-204ENST00000371015 CLASP1Q7Z460 1538 aa21.05■□□□□ 0.96
PHACTR3-204ENST00000371015 PRDM4Q9UKN5 801 aa21.05■□□□□ 0.96
PHACTR3-204ENST00000371015 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
PHACTR3-204ENST00000371015 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
PHACTR3-204ENST00000371015 TPM2P07951 284 aa21■□□□□ 0.95
PHACTR3-204ENST00000371015 TIAM1Q13009 1591 aa20.99■□□□□ 0.95
PHACTR3-204ENST00000371015 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
PHACTR3-204ENST00000371015 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
PHACTR3-204ENST00000371015 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
PHACTR3-204ENST00000371015 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
PHACTR3-204ENST00000371015 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
PHACTR3-204ENST00000371015 NCLP19338 710 aaKnown RBP20.93■□□□□ 0.94
PHACTR3-204ENST00000371015 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
PHACTR3-204ENST00000371015 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
PHACTR3-204ENST00000371015 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
PHACTR3-204ENST00000371015 IGF1RP08069 1367 aa20.92■□□□□ 0.94
PHACTR3-204ENST00000371015 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
PHACTR3-204ENST00000371015 BCL11BQ9C0K0 894 aaPredicted RBP20.91■□□□□ 0.94
PHACTR3-204ENST00000371015 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
PHACTR3-204ENST00000371015 MAP7D2Q96T17 732 aa20.9■□□□□ 0.94
PHACTR3-204ENST00000371015 NUP160Q12769 1436 aa20.89■□□□□ 0.94
PHACTR3-204ENST00000371015 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
PHACTR3-204ENST00000371015 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
PHACTR3-204ENST00000371015 AKNAQ7Z591 1439 aa20.88■□□□□ 0.93
PHACTR3-204ENST00000371015 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
PHACTR3-204ENST00000371015 FRAT2O75474 233 aaPredicted RBP20.86■□□□□ 0.93
PHACTR3-204ENST00000371015 ZNF326Q5BKZ1 582 aaKnown RBP20.86■□□□□ 0.93
PHACTR3-204ENST00000371015 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
PHACTR3-204ENST00000371015 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
PHACTR3-204ENST00000371015 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
PHACTR3-204ENST00000371015 CNTLNQ9NXG0 1405 aa20.84■□□□□ 0.93
PHACTR3-204ENST00000371015 MRS2Q9HD23 443 aa20.83■□□□□ 0.93
PHACTR3-204ENST00000371015 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.92
PHACTR3-204ENST00000371015 PHLDB1Q86UU1 1377 aa20.82■□□□□ 0.92
PHACTR3-204ENST00000371015 CFAP43Q8NDM7 1665 aa20.82■□□□□ 0.92
PHACTR3-204ENST00000371015 PRKRIP1Q9H875 184 aaPredicted RBP20.82■□□□□ 0.92
PHACTR3-204ENST00000371015 SMAP1Q8IYB5 467 aaPredicted RBP20.8■□□□□ 0.92
PHACTR3-204ENST00000371015 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
PHACTR3-204ENST00000371015 RGS3P49796 1198 aa20.8■□□□□ 0.92
PHACTR3-204ENST00000371015 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
PHACTR3-204ENST00000371015 FAM50AQ14320 339 aaKnown RBP20.76■□□□□ 0.91
PHACTR3-204ENST00000371015 TERF1P54274 439 aa20.76■□□□□ 0.91
PHACTR3-204ENST00000371015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.91
PHACTR3-204ENST00000371015 PCF11O94913 1555 aaKnown RBP20.73■□□□□ 0.91
PHACTR3-204ENST00000371015 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
PHACTR3-204ENST00000371015 CCDC184Q52MB2 194 aa20.73■□□□□ 0.91
PHACTR3-204ENST00000371015 MTERF4Q7Z6M4 381 aaKnown RBP20.73■□□□□ 0.91
PHACTR3-204ENST00000371015 GOLGA6L3A6NEY3 463 aa20.72■□□□□ 0.91
PHACTR3-204ENST00000371015 BBXQ8WY36 941 aaPredicted RBP20.71■□□□□ 0.91
PHACTR3-204ENST00000371015 FSD2A1L4K1 749 aa20.7■□□□□ 0.9
PHACTR3-204ENST00000371015 ISY1Q9ULR0 285 aaKnown RBP20.7■□□□□ 0.9
PHACTR3-204ENST00000371015 FYCO1Q9BQS8 1478 aa20.7■□□□□ 0.9
PHACTR3-204ENST00000371015 UTP14CQ5TAP6 766 aaKnown RBP20.69■□□□□ 0.9
PHACTR3-204ENST00000371015 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
PHACTR3-204ENST00000371015 ESPNB1AK53 854 aa20.69■□□□□ 0.9
PHACTR3-204ENST00000371015 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
PHACTR3-204ENST00000371015 POGKQ9P215 609 aa20.69■□□□□ 0.9
PHACTR3-204ENST00000371015 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
PHACTR3-204ENST00000371015 XRCC6P12956 609 aaKnown RBP eCLIP20.68■□□□□ 0.9
PHACTR3-204ENST00000371015 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
PHACTR3-204ENST00000371015 KIAA0586Q9BVV6 1533 aa20.67■□□□□ 0.9
PHACTR3-204ENST00000371015 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
PHACTR3-204ENST00000371015 IPO4Q8TEX9 1081 aaKnown RBP20.67■□□□□ 0.9
PHACTR3-204ENST00000371015 CASKIN1Q8WXD9 1431 aa20.65■□□□□ 0.9
PHACTR3-204ENST00000371015 MRE11P49959 708 aa20.64■□□□□ 0.9
PHACTR3-204ENST00000371015 SLC4A3P48751 1232 aa20.63■□□□□ 0.89
PHACTR3-204ENST00000371015 GTF2E1P29083 439 aaPredicted RBP20.62■□□□□ 0.89
PHACTR3-204ENST00000371015 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
PHACTR3-204ENST00000371015 FAM161AQ3B820 660 aa20.6■□□□□ 0.89
PHACTR3-204ENST00000371015 EXOC6Q8TAG9 804 aa20.6■□□□□ 0.89
PHACTR3-204ENST00000371015 ATP1B4Q9UN42 357 aaPredicted RBP20.6■□□□□ 0.89
PHACTR3-204ENST00000371015 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
PHACTR3-204ENST00000371015 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
PHACTR3-204ENST00000371015 MYH16Q9H6N6 1097 aa20.59■□□□□ 0.89
PHACTR3-204ENST00000371015 STAC3Q96MF2 364 aa20.58■□□□□ 0.89
PHACTR3-204ENST00000371015 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.89
PHACTR3-204ENST00000371015 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.88
PHACTR3-204ENST00000371015 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
PHACTR3-204ENST00000371015 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
PHACTR3-204ENST00000371015 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
PHACTR3-204ENST00000371015 NCOA1Q15788 1441 aa20.56■□□□□ 0.88
PHACTR3-204ENST00000371015 HSPA5P11021 654 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms