RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
LRRC40-201ENST00000370952 NEFMP07197 916 aa13.01□□□□□ -0.33
LRRC40-201ENST00000370952 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
LRRC40-201ENST00000370952 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
LRRC40-201ENST00000370952 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
LRRC40-201ENST00000370952 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
LRRC40-201ENST00000370952 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
LRRC40-201ENST00000370952 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.34
LRRC40-201ENST00000370952 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
LRRC40-201ENST00000370952 SPATA31E1Q6ZUB1 1445 aa12.96□□□□□ -0.34
LRRC40-201ENST00000370952 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
LRRC40-201ENST00000370952 PDE4AP27815 886 aa12.95□□□□□ -0.34
LRRC40-201ENST00000370952 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
LRRC40-201ENST00000370952 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
LRRC40-201ENST00000370952 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
LRRC40-201ENST00000370952 UGGT2Q9NYU1 1516 aa12.94□□□□□ -0.34
LRRC40-201ENST00000370952 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
LRRC40-201ENST00000370952 GRIN2BQ13224 1484 aa12.93□□□□□ -0.34
LRRC40-201ENST00000370952 ARID3CA6NKF2 412 aa12.93□□□□□ -0.34
LRRC40-201ENST00000370952 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
LRRC40-201ENST00000370952 TEX14Q8IWB6 1497 aa12.93□□□□□ -0.34
LRRC40-201ENST00000370952 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
LRRC40-201ENST00000370952 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
LRRC40-201ENST00000370952 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
LRRC40-201ENST00000370952 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
LRRC40-201ENST00000370952 TCERG1O14776 1098 aaKnown RBP12.91□□□□□ -0.34
LRRC40-201ENST00000370952 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
LRRC40-201ENST00000370952 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
LRRC40-201ENST00000370952 BCORL1Q5H9F3 1711 aa12.91□□□□□ -0.34
LRRC40-201ENST00000370952 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
LRRC40-201ENST00000370952 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
LRRC40-201ENST00000370952 CUL7Q14999 1698 aa12.89□□□□□ -0.35
LRRC40-201ENST00000370952 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
LRRC40-201ENST00000370952 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
LRRC40-201ENST00000370952 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
LRRC40-201ENST00000370952 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
LRRC40-201ENST00000370952 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
LRRC40-201ENST00000370952 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
LRRC40-201ENST00000370952 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
LRRC40-201ENST00000370952 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
LRRC40-201ENST00000370952 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
LRRC40-201ENST00000370952 USP47Q96K76 1375 aa12.87□□□□□ -0.35
LRRC40-201ENST00000370952 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
LRRC40-201ENST00000370952 RCAN3Q9UKA8 241 aa12.86□□□□□ -0.35
LRRC40-201ENST00000370952 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
LRRC40-201ENST00000370952 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
LRRC40-201ENST00000370952 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
LRRC40-201ENST00000370952 PLIN1O60240 522 aa12.83□□□□□ -0.35
LRRC40-201ENST00000370952 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
LRRC40-201ENST00000370952 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
LRRC40-201ENST00000370952 GSE1Q14687 1217 aa12.83□□□□□ -0.36
LRRC40-201ENST00000370952 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
LRRC40-201ENST00000370952 MS4A1P11836 297 aa12.82□□□□□ -0.36
LRRC40-201ENST00000370952 CDK13Q14004 1512 aaKnown RBP12.81□□□□□ -0.36
LRRC40-201ENST00000370952 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
LRRC40-201ENST00000370952 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
LRRC40-201ENST00000370952 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
LRRC40-201ENST00000370952 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
LRRC40-201ENST00000370952 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
LRRC40-201ENST00000370952 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
LRRC40-201ENST00000370952 DAPK1P53355 1430 aa12.79□□□□□ -0.36
LRRC40-201ENST00000370952 KDM5CP41229 1560 aa12.78□□□□□ -0.36
LRRC40-201ENST00000370952 KIF15Q9NS87 1388 aa12.78□□□□□ -0.36
LRRC40-201ENST00000370952 MYBBP1AQ9BQG0 1328 aaKnown RBP12.78□□□□□ -0.36
LRRC40-201ENST00000370952 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
LRRC40-201ENST00000370952 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
LRRC40-201ENST00000370952 EPRSP07814 1512 aaKnown RBP12.77□□□□□ -0.36
LRRC40-201ENST00000370952 ABCC5O15440 1437 aa12.76□□□□□ -0.37
LRRC40-201ENST00000370952 NESP48681 1621 aa12.76□□□□□ -0.37
LRRC40-201ENST00000370952 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
LRRC40-201ENST00000370952 BRD4O60885 1362 aaPredicted RBP12.76□□□□□ -0.37
LRRC40-201ENST00000370952 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
LRRC40-201ENST00000370952 PZPP20742 1482 aa12.75□□□□□ -0.37
LRRC40-201ENST00000370952 UBE2Q2Q8WVN8 375 aa12.75□□□□□ -0.37
LRRC40-201ENST00000370952 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
LRRC40-201ENST00000370952 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
LRRC40-201ENST00000370952 KIF14Q15058 1648 aa12.74□□□□□ -0.37
LRRC40-201ENST00000370952 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
LRRC40-201ENST00000370952 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
LRRC40-201ENST00000370952 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
LRRC40-201ENST00000370952 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
LRRC40-201ENST00000370952 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
LRRC40-201ENST00000370952 PKD2Q13563 968 aa12.73□□□□□ -0.37
LRRC40-201ENST00000370952 RALBP1Q15311 655 aa12.73□□□□□ -0.37
LRRC40-201ENST00000370952 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
LRRC40-201ENST00000370952 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
LRRC40-201ENST00000370952 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
LRRC40-201ENST00000370952 FRAT2O75474 233 aaPredicted RBP12.71□□□□□ -0.37
LRRC40-201ENST00000370952 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
LRRC40-201ENST00000370952 PDE3BQ13370 1112 aa12.71□□□□□ -0.38
LRRC40-201ENST00000370952 KIAA1107Q9UPP5 1409 aa12.7□□□□□ -0.38
LRRC40-201ENST00000370952 NLRP13Q86W25 1043 aa12.7□□□□□ -0.38
LRRC40-201ENST00000370952 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
LRRC40-201ENST00000370952 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
LRRC40-201ENST00000370952 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
LRRC40-201ENST00000370952 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
LRRC40-201ENST00000370952 WDR62O43379 1518 aa12.67□□□□□ -0.38
LRRC40-201ENST00000370952 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
LRRC40-201ENST00000370952 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
LRRC40-201ENST00000370952 RGS3P49796 1198 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms