RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
HIPK1-206ENST00000369559 NUDCQ9Y266 331 aa13.58□□□□□ -0.23
HIPK1-206ENST00000369559 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
HIPK1-206ENST00000369559 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
HIPK1-206ENST00000369559 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
HIPK1-206ENST00000369559 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
HIPK1-206ENST00000369559 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
HIPK1-206ENST00000369559 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
HIPK1-206ENST00000369559 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
HIPK1-206ENST00000369559 GCC2Q8IWJ2 1684 aa13.55□□□□□ -0.24
HIPK1-206ENST00000369559 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
HIPK1-206ENST00000369559 USP35Q9P2H5 1018 aa13.54□□□□□ -0.24
HIPK1-206ENST00000369559 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
HIPK1-206ENST00000369559 RTN4Q9NQC3 1192 aaKnown RBP13.53□□□□□ -0.24
HIPK1-206ENST00000369559 SUPT6HQ7KZ85 1726 aaKnown RBP13.52□□□□□ -0.24
HIPK1-206ENST00000369559 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.24
HIPK1-206ENST00000369559 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.25
HIPK1-206ENST00000369559 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
HIPK1-206ENST00000369559 LRRIQ1Q96JM4 1722 aa13.51□□□□□ -0.25
HIPK1-206ENST00000369559 NEFMP07197 916 aa13.5□□□□□ -0.25
HIPK1-206ENST00000369559 SPATA31E1Q6ZUB1 1445 aa13.5□□□□□ -0.25
HIPK1-206ENST00000369559 EHBP1L1Q8N3D4 1523 aa13.49□□□□□ -0.25
HIPK1-206ENST00000369559 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
HIPK1-206ENST00000369559 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
HIPK1-206ENST00000369559 WASHC2CQ9Y4E1 1318 aa13.48□□□□□ -0.25
HIPK1-206ENST00000369559 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
HIPK1-206ENST00000369559 KDM6BO15054 1643 aa13.48□□□□□ -0.25
HIPK1-206ENST00000369559 NBPF8Q3BBV2 869 aa13.47□□□□□ -0.25
HIPK1-206ENST00000369559 LAS1LQ9Y4W2 734 aaKnown RBP13.47□□□□□ -0.25
HIPK1-206ENST00000369559 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
HIPK1-206ENST00000369559 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
HIPK1-206ENST00000369559 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
HIPK1-206ENST00000369559 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
HIPK1-206ENST00000369559 TCOF1Q13428 1488 aaKnown RBP13.46□□□□□ -0.26
HIPK1-206ENST00000369559 CUL7Q14999 1698 aa13.45□□□□□ -0.26
HIPK1-206ENST00000369559 RPRD2Q5VT52 1461 aaKnown RBP13.45□□□□□ -0.26
HIPK1-206ENST00000369559 TEX14Q8IWB6 1497 aa13.45□□□□□ -0.26
HIPK1-206ENST00000369559 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
HIPK1-206ENST00000369559 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
HIPK1-206ENST00000369559 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
HIPK1-206ENST00000369559 FBLN2P98095 1184 aa13.45□□□□□ -0.26
HIPK1-206ENST00000369559 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
HIPK1-206ENST00000369559 PDE4AP27815 886 aa13.44□□□□□ -0.26
HIPK1-206ENST00000369559 FOXD1Q16676 465 aa13.43□□□□□ -0.26
HIPK1-206ENST00000369559 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
HIPK1-206ENST00000369559 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
HIPK1-206ENST00000369559 ANKRD30BQ9BXX2 1392 aa13.42□□□□□ -0.26
HIPK1-206ENST00000369559 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
HIPK1-206ENST00000369559 MS4A1P11836 297 aa13.41□□□□□ -0.26
HIPK1-206ENST00000369559 PNISRQ8TF01 805 aaKnown RBP13.41□□□□□ -0.26
HIPK1-206ENST00000369559 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
HIPK1-206ENST00000369559 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
HIPK1-206ENST00000369559 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
HIPK1-206ENST00000369559 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
HIPK1-206ENST00000369559 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
HIPK1-206ENST00000369559 UBE2Q2Q8WVN8 375 aa13.39□□□□□ -0.27
HIPK1-206ENST00000369559 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
HIPK1-206ENST00000369559 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
HIPK1-206ENST00000369559 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
HIPK1-206ENST00000369559 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
HIPK1-206ENST00000369559 GSE1Q14687 1217 aa13.36□□□□□ -0.27
HIPK1-206ENST00000369559 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
HIPK1-206ENST00000369559 BRPF3Q9ULD4 1205 aa13.36□□□□□ -0.27
HIPK1-206ENST00000369559 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
HIPK1-206ENST00000369559 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
HIPK1-206ENST00000369559 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
HIPK1-206ENST00000369559 MAGI1Q96QZ7 1491 aaPredicted RBP13.35□□□□□ -0.27
HIPK1-206ENST00000369559 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
HIPK1-206ENST00000369559 USP47Q96K76 1375 aa13.34□□□□□ -0.27
HIPK1-206ENST00000369559 ADAMTS12P58397 1594 aa13.33□□□□□ -0.28
HIPK1-206ENST00000369559 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
HIPK1-206ENST00000369559 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
HIPK1-206ENST00000369559 MBD5Q9P267 1494 aa13.32□□□□□ -0.28
HIPK1-206ENST00000369559 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
HIPK1-206ENST00000369559 ROCK1Q13464 1354 aa13.31□□□□□ -0.28
HIPK1-206ENST00000369559 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
HIPK1-206ENST00000369559 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
HIPK1-206ENST00000369559 KDM5CP41229 1560 aa13.31□□□□□ -0.28
HIPK1-206ENST00000369559 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
HIPK1-206ENST00000369559 KIF14Q15058 1648 aa13.3□□□□□ -0.28
HIPK1-206ENST00000369559 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
HIPK1-206ENST00000369559 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
HIPK1-206ENST00000369559 GRIN2AQ12879 1464 aa13.28□□□□□ -0.28
HIPK1-206ENST00000369559 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
HIPK1-206ENST00000369559 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
HIPK1-206ENST00000369559 DAPK1P53355 1430 aa13.28□□□□□ -0.28
HIPK1-206ENST00000369559 EIF5BO60841 1220 aaKnown RBP13.26□□□□□ -0.29
HIPK1-206ENST00000369559 RALBP1Q15311 655 aa13.26□□□□□ -0.29
HIPK1-206ENST00000369559 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
HIPK1-206ENST00000369559 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
HIPK1-206ENST00000369559 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
HIPK1-206ENST00000369559 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
HIPK1-206ENST00000369559 CHD1O14646 1710 aa13.24□□□□□ -0.29
HIPK1-206ENST00000369559 PZPP20742 1482 aa13.24□□□□□ -0.29
HIPK1-206ENST00000369559 ABCC5O15440 1437 aa13.24□□□□□ -0.29
HIPK1-206ENST00000369559 SLC4A3P48751 1232 aa13.22□□□□□ -0.29
HIPK1-206ENST00000369559 SKAP1Q86WV1 359 aa13.22□□□□□ -0.29
HIPK1-206ENST00000369559 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
HIPK1-206ENST00000369559 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
HIPK1-206ENST00000369559 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms