RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
TMC3-201ENST00000359440 IGF1RP08069 1367 aa14.58□□□□□ -0.08
TMC3-201ENST00000359440 CC2D1BQ5T0F9 858 aaKnown RBP14.57□□□□□ -0.08
TMC3-201ENST00000359440 FGD6Q6ZV73 1430 aa14.57□□□□□ -0.08
TMC3-201ENST00000359440 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
TMC3-201ENST00000359440 CARMIL2Q6F5E8 1435 aa14.56□□□□□ -0.08
TMC3-201ENST00000359440 PRXQ9BXM0 1461 aa14.56□□□□□ -0.08
TMC3-201ENST00000359440 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
TMC3-201ENST00000359440 MYBBP1AQ9BQG0 1328 aaKnown RBP14.54□□□□□ -0.08
TMC3-201ENST00000359440 ARXQ96QS3 562 aa14.54□□□□□ -0.08
TMC3-201ENST00000359440 NUP155O75694 1391 aa14.54□□□□□ -0.08
TMC3-201ENST00000359440 RSPH4AQ5TD94 716 aa14.54□□□□□ -0.08
TMC3-201ENST00000359440 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
TMC3-201ENST00000359440 PNNQ9H307 717 aaKnown RBP14.54□□□□□ -0.08
TMC3-201ENST00000359440 ARAP1Q96P48 1450 aa14.53□□□□□ -0.08
TMC3-201ENST00000359440 CNTLNQ9NXG0 1405 aa14.53□□□□□ -0.08
TMC3-201ENST00000359440 NCLP19338 710 aaKnown RBP14.53□□□□□ -0.08
TMC3-201ENST00000359440 MYOM3Q5VTT5 1437 aa14.52□□□□□ -0.08
TMC3-201ENST00000359440 FOXD1Q16676 465 aa14.52□□□□□ -0.09
TMC3-201ENST00000359440 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.09
TMC3-201ENST00000359440 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.09
TMC3-201ENST00000359440 CASC1Q6TDU7 716 aa14.51□□□□□ -0.09
TMC3-201ENST00000359440 PTMSP20962 102 aa14.51□□□□□ -0.09
TMC3-201ENST00000359440 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
TMC3-201ENST00000359440 SENP3-EIF4A1A0A087X0R7 540 aa14.51□□□□□ -0.09
TMC3-201ENST00000359440 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
TMC3-201ENST00000359440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMC3-201ENST00000359440 KANK1Q14678 1352 aa14.5□□□□□ -0.09
TMC3-201ENST00000359440 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
TMC3-201ENST00000359440 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
TMC3-201ENST00000359440 ESF1Q9H501 851 aaKnown RBP14.5□□□□□ -0.09
TMC3-201ENST00000359440 CCDC7Q96M83 1385 aa14.49□□□□□ -0.09
TMC3-201ENST00000359440 FRAT1Q92837 279 aaPredicted RBP14.48□□□□□ -0.09
TMC3-201ENST00000359440 HSCBQ8IWL3 235 aa14.48□□□□□ -0.09
TMC3-201ENST00000359440 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
TMC3-201ENST00000359440 GOLGA2Q08379 1002 aa14.46□□□□□ -0.09
TMC3-201ENST00000359440 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
TMC3-201ENST00000359440 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.09
TMC3-201ENST00000359440 RRP1P56182 461 aaKnown RBP14.46□□□□□ -0.09
TMC3-201ENST00000359440 USP47Q96K76 1375 aa14.46□□□□□ -0.09
TMC3-201ENST00000359440 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.1
TMC3-201ENST00000359440 EIF3AQ14152 1382 aaKnown RBP14.46□□□□□ -0.1
TMC3-201ENST00000359440 PMFBP1Q8TBY8 1022 aa14.45□□□□□ -0.1
TMC3-201ENST00000359440 CENPQQ7L2Z9 268 aaPredicted RBP14.45□□□□□ -0.1
TMC3-201ENST00000359440 NGEFQ8N5V2 710 aa14.45□□□□□ -0.1
TMC3-201ENST00000359440 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
TMC3-201ENST00000359440 PDE4AP27815 886 aa14.44□□□□□ -0.1
TMC3-201ENST00000359440 RWDD1Q9H446 243 aaPredicted RBP14.44□□□□□ -0.1
TMC3-201ENST00000359440 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
TMC3-201ENST00000359440 MAP3K1Q13233 1512 aa14.43□□□□□ -0.1
TMC3-201ENST00000359440 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
TMC3-201ENST00000359440 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
TMC3-201ENST00000359440 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
TMC3-201ENST00000359440 MIA2Q96PC5 1412 aa14.41□□□□□ -0.1
TMC3-201ENST00000359440 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
TMC3-201ENST00000359440 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
TMC3-201ENST00000359440 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
TMC3-201ENST00000359440 FAM161AQ3B820 660 aa14.4□□□□□ -0.1
TMC3-201ENST00000359440 CFTRP13569 1480 aa14.4□□□□□ -0.1
TMC3-201ENST00000359440 GBP4Q96PP9 640 aa14.39□□□□□ -0.11
TMC3-201ENST00000359440 WASHC2AQ641Q2 1341 aa14.39□□□□□ -0.11
TMC3-201ENST00000359440 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
TMC3-201ENST00000359440 KIF7Q2M1P5 1343 aa14.39□□□□□ -0.11
TMC3-201ENST00000359440 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
TMC3-201ENST00000359440 ST20-MTHFSA0A0A6YYL1 179 aa14.38□□□□□ -0.11
TMC3-201ENST00000359440 PTMAP06454 111 aaKnown RBP14.38□□□□□ -0.11
TMC3-201ENST00000359440 BRD4O60885 1362 aaPredicted RBP14.37□□□□□ -0.11
TMC3-201ENST00000359440 CCDC144AA2RUR9 1427 aa14.37□□□□□ -0.11
TMC3-201ENST00000359440 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
TMC3-201ENST00000359440 GSE1Q14687 1217 aa14.35□□□□□ -0.11
TMC3-201ENST00000359440 CGNL1Q0VF96 1302 aa14.35□□□□□ -0.11
TMC3-201ENST00000359440 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
TMC3-201ENST00000359440 CALD1Q05682 793 aaKnown RBP14.34□□□□□ -0.11
TMC3-201ENST00000359440 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
TMC3-201ENST00000359440 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
TMC3-201ENST00000359440 EFCAB2Q5VUJ9 269 aa14.34□□□□□ -0.11
TMC3-201ENST00000359440 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
TMC3-201ENST00000359440 STAC3Q96MF2 364 aa14.34□□□□□ -0.11
TMC3-201ENST00000359440 EHBP1L1Q8N3D4 1523 aa14.33□□□□□ -0.11
TMC3-201ENST00000359440 WDR97A6NE52 1622 aa14.33□□□□□ -0.12
TMC3-201ENST00000359440 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
TMC3-201ENST00000359440 AAMPQ13685 434 aa14.33□□□□□ -0.12
TMC3-201ENST00000359440 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
TMC3-201ENST00000359440 MSNP26038 577 aaKnown RBP14.32□□□□□ -0.12
TMC3-201ENST00000359440 E9PSI1 815 aa14.32□□□□□ -0.12
TMC3-201ENST00000359440 WASHC2CQ9Y4E1 1318 aa14.31□□□□□ -0.12
TMC3-201ENST00000359440 RSPH6AQ9H0K4 717 aa14.31□□□□□ -0.12
TMC3-201ENST00000359440 POGKQ9P215 609 aa14.3□□□□□ -0.12
TMC3-201ENST00000359440 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
TMC3-201ENST00000359440 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
TMC3-201ENST00000359440 DNTTIP2Q5QJE6 756 aaKnown RBP14.29□□□□□ -0.12
TMC3-201ENST00000359440 PANK3Q9H999 370 aa14.29□□□□□ -0.12
TMC3-201ENST00000359440 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
TMC3-201ENST00000359440 MCCP23508 829 aa14.28□□□□□ -0.12
TMC3-201ENST00000359440 CRBNQ96SW2 442 aa14.28□□□□□ -0.12
TMC3-201ENST00000359440 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.13
TMC3-201ENST00000359440 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
TMC3-201ENST00000359440 U2AF1L5P0DN76 240 aaPredicted RBP14.25□□□□□ -0.13
TMC3-201ENST00000359440 U2AF1Q01081 240 aaKnown RBP eCLIP14.25□□□□□ -0.13
TMC3-201ENST00000359440 HNRNPMP52272 730 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms