RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
SLC6A20-202ENST00000358525 NOP58Q9Y2X3 529 aaKnown RBP19.04■□□□□ 0.64
SLC6A20-202ENST00000358525 U2SURPO15042 1029 aaKnown RBP19.03■□□□□ 0.64
SLC6A20-202ENST00000358525 JPH4Q96JJ6 628 aa19.01■□□□□ 0.63
SLC6A20-202ENST00000358525 RALBP1Q15311 655 aa19■□□□□ 0.63
SLC6A20-202ENST00000358525 GGT6Q6P531 493 aa19■□□□□ 0.63
SLC6A20-202ENST00000358525 NCAPD3P42695 1498 aa19■□□□□ 0.63
SLC6A20-202ENST00000358525 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
SLC6A20-202ENST00000358525 SAFB2Q14151 953 aaKnown RBP eCLIP18.99■□□□□ 0.63
SLC6A20-202ENST00000358525 MORC1Q86VD1 984 aa18.98■□□□□ 0.63
SLC6A20-202ENST00000358525 PHLDB1Q86UU1 1377 aa18.98■□□□□ 0.63
SLC6A20-202ENST00000358525 TSHZ2Q9NRE2 1034 aa18.98■□□□□ 0.63
SLC6A20-202ENST00000358525 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
SLC6A20-202ENST00000358525 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
SLC6A20-202ENST00000358525 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
SLC6A20-202ENST00000358525 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
SLC6A20-202ENST00000358525 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
SLC6A20-202ENST00000358525 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
SLC6A20-202ENST00000358525 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
SLC6A20-202ENST00000358525 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
SLC6A20-202ENST00000358525 STK26Q9P289 416 aa18.91■□□□□ 0.62
SLC6A20-202ENST00000358525 MLECQ14165 292 aa18.9■□□□□ 0.62
SLC6A20-202ENST00000358525 KIF3BO15066 747 aa18.9■□□□□ 0.62
SLC6A20-202ENST00000358525 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.61
SLC6A20-202ENST00000358525 RSPH4AQ5TD94 716 aa18.89■□□□□ 0.61
SLC6A20-202ENST00000358525 MYOM3Q5VTT5 1437 aa18.87■□□□□ 0.61
SLC6A20-202ENST00000358525 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
SLC6A20-202ENST00000358525 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
SLC6A20-202ENST00000358525 MS4A1P11836 297 aa18.86■□□□□ 0.61
SLC6A20-202ENST00000358525 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
SLC6A20-202ENST00000358525 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
SLC6A20-202ENST00000358525 CFTRP13569 1480 aa18.84■□□□□ 0.61
SLC6A20-202ENST00000358525 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.61
SLC6A20-202ENST00000358525 CUX1P39880 1505 aa18.83■□□□□ 0.6
SLC6A20-202ENST00000358525 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.6
SLC6A20-202ENST00000358525 KIF15Q9NS87 1388 aa18.83■□□□□ 0.6
SLC6A20-202ENST00000358525 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.6
SLC6A20-202ENST00000358525 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
SLC6A20-202ENST00000358525 USP47Q96K76 1375 aa18.82■□□□□ 0.6
SLC6A20-202ENST00000358525 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
SLC6A20-202ENST00000358525 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
SLC6A20-202ENST00000358525 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
SLC6A20-202ENST00000358525 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
SLC6A20-202ENST00000358525 GOLGA6L22H0YM25 854 aa18.81■□□□□ 0.6
SLC6A20-202ENST00000358525 CASC1Q6TDU7 716 aa18.81■□□□□ 0.6
SLC6A20-202ENST00000358525 SOX12O15370 315 aa18.8■□□□□ 0.6
SLC6A20-202ENST00000358525 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
SLC6A20-202ENST00000358525 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 PTPRGP23470 1445 aa18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 NCLP19338 710 aaKnown RBP18.79■□□□□ 0.6
SLC6A20-202ENST00000358525 CHMP4BQ9H444 224 aaKnown RBP18.78■□□□□ 0.6
SLC6A20-202ENST00000358525 A0A0G2JS52 829 aa18.77■□□□□ 0.6
SLC6A20-202ENST00000358525 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
SLC6A20-202ENST00000358525 PANK3Q9H999 370 aa18.77■□□□□ 0.6
SLC6A20-202ENST00000358525 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
SLC6A20-202ENST00000358525 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
SLC6A20-202ENST00000358525 TCERG1O14776 1098 aaKnown RBP18.75■□□□□ 0.59
SLC6A20-202ENST00000358525 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
SLC6A20-202ENST00000358525 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
SLC6A20-202ENST00000358525 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
SLC6A20-202ENST00000358525 TRIM44Q96DX7 344 aaPredicted RBP18.74■□□□□ 0.59
SLC6A20-202ENST00000358525 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
SLC6A20-202ENST00000358525 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
SLC6A20-202ENST00000358525 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
SLC6A20-202ENST00000358525 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
SLC6A20-202ENST00000358525 DEKP35659 375 aaKnown RBP18.71■□□□□ 0.59
SLC6A20-202ENST00000358525 NESP48681 1621 aa18.71■□□□□ 0.59
SLC6A20-202ENST00000358525 RTN4Q9NQC3 1192 aaKnown RBP18.7■□□□□ 0.58
SLC6A20-202ENST00000358525 WASHC2CQ9Y4E1 1318 aa18.7■□□□□ 0.58
SLC6A20-202ENST00000358525 CCDC7Q96M83 1385 aa18.7■□□□□ 0.58
SLC6A20-202ENST00000358525 TRAK1Q9UPV9 953 aa18.7■□□□□ 0.58
SLC6A20-202ENST00000358525 SPRYD3Q8NCJ5 442 aa18.69■□□□□ 0.58
SLC6A20-202ENST00000358525 KIF7Q2M1P5 1343 aa18.69■□□□□ 0.58
SLC6A20-202ENST00000358525 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
SLC6A20-202ENST00000358525 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
SLC6A20-202ENST00000358525 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
SLC6A20-202ENST00000358525 HSCBQ8IWL3 235 aa18.66■□□□□ 0.58
SLC6A20-202ENST00000358525 HAP1P54257 671 aaPredicted RBP18.66■□□□□ 0.58
SLC6A20-202ENST00000358525 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
SLC6A20-202ENST00000358525 WASHC2AQ641Q2 1341 aa18.65■□□□□ 0.58
SLC6A20-202ENST00000358525 PLIN1O60240 522 aa18.64■□□□□ 0.58
SLC6A20-202ENST00000358525 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.58
SLC6A20-202ENST00000358525 TIAM1Q13009 1591 aa18.64■□□□□ 0.58
SLC6A20-202ENST00000358525 CNTLNQ9NXG0 1405 aa18.64■□□□□ 0.57
SLC6A20-202ENST00000358525 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.57
SLC6A20-202ENST00000358525 CLUAP1Q96AJ1 413 aa18.63■□□□□ 0.57
SLC6A20-202ENST00000358525 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
SLC6A20-202ENST00000358525 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
SLC6A20-202ENST00000358525 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
SLC6A20-202ENST00000358525 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
SLC6A20-202ENST00000358525 EXOC6Q8TAG9 804 aa18.62■□□□□ 0.57
SLC6A20-202ENST00000358525 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
SLC6A20-202ENST00000358525 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
SLC6A20-202ENST00000358525 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
SLC6A20-202ENST00000358525 RRP1P56182 461 aaKnown RBP18.61■□□□□ 0.57
SLC6A20-202ENST00000358525 SMC4Q9NTJ3 1288 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms