RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 ZMYM4Q5VZL5 1548 aa11.69□□□□□ -0.54
GM2A-201ENST00000357164 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
GM2A-201ENST00000357164 CCDC136Q96JN2 1154 aa11.68□□□□□ -0.54
GM2A-201ENST00000357164 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
GM2A-201ENST00000357164 NBR1Q14596 966 aa11.67□□□□□ -0.54
GM2A-201ENST00000357164 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
GM2A-201ENST00000357164 HSPA5P11021 654 aaKnown RBP11.66□□□□□ -0.54
GM2A-201ENST00000357164 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
GM2A-201ENST00000357164 FMN1Q68DA7 1419 aa11.65□□□□□ -0.54
GM2A-201ENST00000357164 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
GM2A-201ENST00000357164 GAPVD1Q14C86 1478 aa11.64□□□□□ -0.55
GM2A-201ENST00000357164 DNMT1P26358 1616 aaKnown RBP11.63□□□□□ -0.55
GM2A-201ENST00000357164 NUDCQ9Y266 331 aa11.62□□□□□ -0.55
GM2A-201ENST00000357164 ABCA10Q8WWZ4 1543 aa11.62□□□□□ -0.55
GM2A-201ENST00000357164 BACH2Q9BYV9 841 aa11.61□□□□□ -0.55
GM2A-201ENST00000357164 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
GM2A-201ENST00000357164 ANKRD30BQ9BXX2 1392 aa11.6□□□□□ -0.55
GM2A-201ENST00000357164 FHOD3Q2V2M9 1422 aa11.6□□□□□ -0.55
GM2A-201ENST00000357164 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
GM2A-201ENST00000357164 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
GM2A-201ENST00000357164 KIF7Q2M1P5 1343 aa11.59□□□□□ -0.55
GM2A-201ENST00000357164 INSRP06213 1382 aa11.59□□□□□ -0.55
GM2A-201ENST00000357164 CEP170Q5SW79 1584 aa11.58□□□□□ -0.56
GM2A-201ENST00000357164 MS4A1P11836 297 aa11.57□□□□□ -0.56
GM2A-201ENST00000357164 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
GM2A-201ENST00000357164 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
GM2A-201ENST00000357164 BRPF3Q9ULD4 1205 aa11.56□□□□□ -0.56
GM2A-201ENST00000357164 LAMC1P11047 1609 aa11.55□□□□□ -0.56
GM2A-201ENST00000357164 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
GM2A-201ENST00000357164 PZPP20742 1482 aa11.54□□□□□ -0.56
GM2A-201ENST00000357164 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
GM2A-201ENST00000357164 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
GM2A-201ENST00000357164 NBPF8Q3BBV2 869 aa11.54□□□□□ -0.56
GM2A-201ENST00000357164 NLRP1Q9C000 1473 aa11.54□□□□□ -0.56
GM2A-201ENST00000357164 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
GM2A-201ENST00000357164 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
GM2A-201ENST00000357164 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
GM2A-201ENST00000357164 NESP48681 1621 aa11.53□□□□□ -0.56
GM2A-201ENST00000357164 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
GM2A-201ENST00000357164 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
GM2A-201ENST00000357164 GSE1Q14687 1217 aa11.52□□□□□ -0.57
GM2A-201ENST00000357164 KDM2BQ8NHM5 1336 aa11.52□□□□□ -0.57
GM2A-201ENST00000357164 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
GM2A-201ENST00000357164 PDE4AP27815 886 aa11.52□□□□□ -0.57
GM2A-201ENST00000357164 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
GM2A-201ENST00000357164 FAM43AQ8N2R8 423 aa11.51□□□□□ -0.57
GM2A-201ENST00000357164 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
GM2A-201ENST00000357164 CLASP1Q7Z460 1538 aa11.51□□□□□ -0.57
GM2A-201ENST00000357164 TRPM1Q7Z4N2 1603 aa11.51□□□□□ -0.57
GM2A-201ENST00000357164 EIF4G2P78344 907 aaKnown RBP eCLIP11.51□□□□□ -0.57
GM2A-201ENST00000357164 LAMC3Q9Y6N6 1575 aa11.5□□□□□ -0.57
GM2A-201ENST00000357164 RALGAPBQ86X10 1494 aa11.5□□□□□ -0.57
GM2A-201ENST00000357164 ARHGEF12Q9NZN5 1544 aa11.5□□□□□ -0.57
GM2A-201ENST00000357164 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
GM2A-201ENST00000357164 SHROOM2Q13796 1616 aa11.5□□□□□ -0.57
GM2A-201ENST00000357164 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
GM2A-201ENST00000357164 POLR3GLQ9BT43 218 aa11.49□□□□□ -0.57
GM2A-201ENST00000357164 WDR62O43379 1518 aa11.49□□□□□ -0.57
GM2A-201ENST00000357164 NEFMP07197 916 aa11.48□□□□□ -0.57
GM2A-201ENST00000357164 FAM50AQ14320 339 aaKnown RBP11.48□□□□□ -0.57
GM2A-201ENST00000357164 ADCY10Q96PN6 1610 aa11.48□□□□□ -0.57
GM2A-201ENST00000357164 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
GM2A-201ENST00000357164 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
GM2A-201ENST00000357164 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
GM2A-201ENST00000357164 KTN1Q86UP2 1357 aaKnown RBP11.47□□□□□ -0.57
GM2A-201ENST00000357164 RRP1P56182 461 aaKnown RBP11.47□□□□□ -0.57
GM2A-201ENST00000357164 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
GM2A-201ENST00000357164 NFKBIBQ15653 356 aa11.46□□□□□ -0.57
GM2A-201ENST00000357164 FRAT1Q92837 279 aaPredicted RBP11.46□□□□□ -0.57
GM2A-201ENST00000357164 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
GM2A-201ENST00000357164 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
GM2A-201ENST00000357164 ITSN2Q9NZM3 1697 aa11.45□□□□□ -0.58
GM2A-201ENST00000357164 FAM9BQ8IZU0 186 aa11.45□□□□□ -0.58
GM2A-201ENST00000357164 BRD4O60885 1362 aaPredicted RBP11.44□□□□□ -0.58
GM2A-201ENST00000357164 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
GM2A-201ENST00000357164 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
GM2A-201ENST00000357164 PARD3Q8TEW0 1356 aa11.44□□□□□ -0.58
GM2A-201ENST00000357164 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
GM2A-201ENST00000357164 DAPK1P53355 1430 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 RNF17Q9BXT8 1623 aaKnown RBP11.42□□□□□ -0.58
GM2A-201ENST00000357164 EXOC6Q8TAG9 804 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 CDC42BPAQ5VT25 1732 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 USP19O94966 1318 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 MYO5CQ9NQX4 1742 aa11.42□□□□□ -0.58
GM2A-201ENST00000357164 PLEKHH2Q8IVE3 1493 aa11.41□□□□□ -0.58
GM2A-201ENST00000357164 KCNA4P22459 653 aa11.41□□□□□ -0.58
GM2A-201ENST00000357164 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
GM2A-201ENST00000357164 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
GM2A-201ENST00000357164 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
GM2A-201ENST00000357164 ABCC5O15440 1437 aa11.4□□□□□ -0.58
GM2A-201ENST00000357164 LAS1LQ9Y4W2 734 aaKnown RBP11.4□□□□□ -0.58
GM2A-201ENST00000357164 PLXNC1O60486 1568 aa11.4□□□□□ -0.58
GM2A-201ENST00000357164 RRAGDQ9NQL2 400 aaPredicted RBP11.4□□□□□ -0.58
GM2A-201ENST00000357164 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
GM2A-201ENST00000357164 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
GM2A-201ENST00000357164 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
GM2A-201ENST00000357164 EIF4G3O43432 1585 aaKnown RBP11.38□□□□□ -0.59
GM2A-201ENST00000357164 ROCK2O75116 1388 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms