RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
TRIM4-203ENST00000355947 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
TRIM4-203ENST00000355947 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
TRIM4-203ENST00000355947 ARXQ96QS3 562 aa18.18■□□□□ 0.5
TRIM4-203ENST00000355947 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
TRIM4-203ENST00000355947 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.5
TRIM4-203ENST00000355947 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
TRIM4-203ENST00000355947 MYOM3Q5VTT5 1437 aa18.13■□□□□ 0.49
TRIM4-203ENST00000355947 PDE4AP27815 886 aa18.13■□□□□ 0.49
TRIM4-203ENST00000355947 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
TRIM4-203ENST00000355947 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
TRIM4-203ENST00000355947 CDCA7LQ96GN5 454 aa18.11■□□□□ 0.49
TRIM4-203ENST00000355947 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
TRIM4-203ENST00000355947 RCAN3Q9UKA8 241 aa18.11■□□□□ 0.49
TRIM4-203ENST00000355947 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
TRIM4-203ENST00000355947 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
TRIM4-203ENST00000355947 PKD2Q13563 968 aa18.08■□□□□ 0.49
TRIM4-203ENST00000355947 MAP3K1Q13233 1512 aa18.08■□□□□ 0.49
TRIM4-203ENST00000355947 RGS3P49796 1198 aa18.08■□□□□ 0.48
TRIM4-203ENST00000355947 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
TRIM4-203ENST00000355947 ST20-MTHFSA0A0A6YYL1 179 aa18.05■□□□□ 0.48
TRIM4-203ENST00000355947 USP47Q96K76 1375 aa18.05■□□□□ 0.48
TRIM4-203ENST00000355947 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
TRIM4-203ENST00000355947 DCAF11Q8TEB1 546 aa18.04■□□□□ 0.48
TRIM4-203ENST00000355947 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
TRIM4-203ENST00000355947 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
TRIM4-203ENST00000355947 FBLN2P98095 1184 aa18.03■□□□□ 0.48
TRIM4-203ENST00000355947 TOPBP1Q92547 1522 aa18.02■□□□□ 0.48
TRIM4-203ENST00000355947 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
TRIM4-203ENST00000355947 CRBNQ96SW2 442 aa18■□□□□ 0.47
TRIM4-203ENST00000355947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.471e-7■■■■□ 20.2
TRIM4-203ENST00000355947 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
TRIM4-203ENST00000355947 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
TRIM4-203ENST00000355947 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
TRIM4-203ENST00000355947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRIM4-203ENST00000355947 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.46
TRIM4-203ENST00000355947 URB2Q14146 1524 aaKnown RBP17.95■□□□□ 0.46
TRIM4-203ENST00000355947 KDM6BO15054 1643 aa17.95■□□□□ 0.46
TRIM4-203ENST00000355947 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
TRIM4-203ENST00000355947 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
TRIM4-203ENST00000355947 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
TRIM4-203ENST00000355947 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
TRIM4-203ENST00000355947 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
TRIM4-203ENST00000355947 ANKRD30BQ9BXX2 1392 aa17.92■□□□□ 0.46
TRIM4-203ENST00000355947 CDK13Q14004 1512 aaKnown RBP17.91■□□□□ 0.46
TRIM4-203ENST00000355947 NFKBIBQ15653 356 aa17.9■□□□□ 0.46
TRIM4-203ENST00000355947 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
TRIM4-203ENST00000355947 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
TRIM4-203ENST00000355947 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
TRIM4-203ENST00000355947 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
TRIM4-203ENST00000355947 GSE1Q14687 1217 aa17.87■□□□□ 0.45
TRIM4-203ENST00000355947 DHX29Q7Z478 1369 aaKnown RBP17.87■□□□□ 0.45
TRIM4-203ENST00000355947 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
TRIM4-203ENST00000355947 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
TRIM4-203ENST00000355947 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
TRIM4-203ENST00000355947 DDRGK1Q96HY6 314 aa17.86■□□□□ 0.45
TRIM4-203ENST00000355947 NUP155O75694 1391 aa17.85■□□□□ 0.45
TRIM4-203ENST00000355947 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
TRIM4-203ENST00000355947 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
TRIM4-203ENST00000355947 FRAT2O75474 233 aaPredicted RBP17.85■□□□□ 0.45
TRIM4-203ENST00000355947 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
TRIM4-203ENST00000355947 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
TRIM4-203ENST00000355947 NLRP13Q86W25 1043 aa17.83■□□□□ 0.45
TRIM4-203ENST00000355947 CANXP27824 592 aaKnown RBP17.83■□□□□ 0.45
TRIM4-203ENST00000355947 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.45
TRIM4-203ENST00000355947 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
TRIM4-203ENST00000355947 NBPF1Q3BBV0 1214 aa17.82■□□□□ 0.44
TRIM4-203ENST00000355947 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
TRIM4-203ENST00000355947 RPRD2Q5VT52 1461 aaKnown RBP17.82■□□□□ 0.44
TRIM4-203ENST00000355947 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM4-203ENST00000355947 KTN1Q86UP2 1357 aaKnown RBP17.81■□□□□ 0.44
TRIM4-203ENST00000355947 RALBP1Q15311 655 aa17.8■□□□□ 0.44
TRIM4-203ENST00000355947 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
TRIM4-203ENST00000355947 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
TRIM4-203ENST00000355947 PANK3Q9H999 370 aa17.79■□□□□ 0.44
TRIM4-203ENST00000355947 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
TRIM4-203ENST00000355947 EHBP1L1Q8N3D4 1523 aa17.79■□□□□ 0.44
TRIM4-203ENST00000355947 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
TRIM4-203ENST00000355947 TSPY4P0CV99 314 aa17.79■□□□□ 0.44
TRIM4-203ENST00000355947 TSPY10P0CW01 314 aa17.79■□□□□ 0.44
TRIM4-203ENST00000355947 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
TRIM4-203ENST00000355947 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
TRIM4-203ENST00000355947 DAPK1P53355 1430 aa17.76■□□□□ 0.43
TRIM4-203ENST00000355947 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRIM4-203ENST00000355947 SPATA31E1Q6ZUB1 1445 aa17.75■□□□□ 0.43
TRIM4-203ENST00000355947 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
TRIM4-203ENST00000355947 MS4A1P11836 297 aa17.75■□□□□ 0.43
TRIM4-203ENST00000355947 ABCC5O15440 1437 aa17.74■□□□□ 0.43
TRIM4-203ENST00000355947 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
TRIM4-203ENST00000355947 GZF1Q9H116 711 aaPredicted RBP17.74■□□□□ 0.43
TRIM4-203ENST00000355947 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
TRIM4-203ENST00000355947 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
TRIM4-203ENST00000355947 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
TRIM4-203ENST00000355947 EPRSP07814 1512 aaKnown RBP17.73■□□□□ 0.43
TRIM4-203ENST00000355947 TNNT2P45379 298 aaPredicted RBP17.72■□□□□ 0.43
TRIM4-203ENST00000355947 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
TRIM4-203ENST00000355947 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
TRIM4-203ENST00000355947 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
TRIM4-203ENST00000355947 PRG4Q92954 1404 aaPredicted RBP17.69■□□□□ 0.42
TRIM4-203ENST00000355947 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms