RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
PCDHB13-201ENST00000341948 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
PCDHB13-201ENST00000341948 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
PCDHB13-201ENST00000341948 LAS1LQ9Y4W2 734 aaKnown RBP19.78■□□□□ 0.76
PCDHB13-201ENST00000341948 NESP48681 1621 aa19.77■□□□□ 0.76
PCDHB13-201ENST00000341948 EID1Q9Y6B2 187 aa19.75■□□□□ 0.75
PCDHB13-201ENST00000341948 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
PCDHB13-201ENST00000341948 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
PCDHB13-201ENST00000341948 NUTM2DQ5VT03 806 aaPredicted RBP19.73■□□□□ 0.75
PCDHB13-201ENST00000341948 HSPA5P11021 654 aaKnown RBP19.72■□□□□ 0.75
PCDHB13-201ENST00000341948 MORC1Q86VD1 984 aa19.71■□□□□ 0.75
PCDHB13-201ENST00000341948 CFTRP13569 1480 aa19.71■□□□□ 0.75
PCDHB13-201ENST00000341948 HDGFL2Q7Z4V5 671 aaPredicted RBP19.7■□□□□ 0.74
PCDHB13-201ENST00000341948 PAK3O75914 559 aaPredicted RBP19.69■□□□□ 0.74
PCDHB13-201ENST00000341948 ROCK2O75116 1388 aaKnown RBP19.68■□□□□ 0.74
PCDHB13-201ENST00000341948 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
PCDHB13-201ENST00000341948 ANP32BQ92688 251 aaKnown RBP19.66■□□□□ 0.74
PCDHB13-201ENST00000341948 SUPT16HQ9Y5B9 1047 aaKnown RBP19.65■□□□□ 0.74
PCDHB13-201ENST00000341948 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
PCDHB13-201ENST00000341948 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.74
PCDHB13-201ENST00000341948 L3MBTL2Q969R5 705 aa19.64■□□□□ 0.73
PCDHB13-201ENST00000341948 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
PCDHB13-201ENST00000341948 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
PCDHB13-201ENST00000341948 NPHP1O15259 732 aa19.58■□□□□ 0.72
PCDHB13-201ENST00000341948 HMGXB3Q12766 1538 aa19.57■□□□□ 0.72
PCDHB13-201ENST00000341948 FRAT1Q92837 279 aaPredicted RBP19.56■□□□□ 0.72
PCDHB13-201ENST00000341948 NUTM2FA1L443 756 aa19.56■□□□□ 0.72
PCDHB13-201ENST00000341948 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
PCDHB13-201ENST00000341948 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
PCDHB13-201ENST00000341948 NBR1Q14596 966 aa19.55■□□□□ 0.72
PCDHB13-201ENST00000341948 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
PCDHB13-201ENST00000341948 EIF3AQ14152 1382 aaKnown RBP19.55■□□□□ 0.72
PCDHB13-201ENST00000341948 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
PCDHB13-201ENST00000341948 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
PCDHB13-201ENST00000341948 ZNF644Q9H582 1327 aaPredicted RBP19.53■□□□□ 0.72
PCDHB13-201ENST00000341948 CCER2I3L3R5 266 aa19.53■□□□□ 0.72
PCDHB13-201ENST00000341948 CCDC144AA2RUR9 1427 aa19.52■□□□□ 0.72
PCDHB13-201ENST00000341948 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
PCDHB13-201ENST00000341948 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
PCDHB13-201ENST00000341948 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
PCDHB13-201ENST00000341948 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
PCDHB13-201ENST00000341948 VGFO15240 615 aaPredicted RBP19.51■□□□□ 0.71
PCDHB13-201ENST00000341948 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
PCDHB13-201ENST00000341948 U2AF1L5P0DN76 240 aaPredicted RBP19.49■□□□□ 0.71
PCDHB13-201ENST00000341948 U2AF1Q01081 240 aaKnown RBP eCLIP19.49■□□□□ 0.71
PCDHB13-201ENST00000341948 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
PCDHB13-201ENST00000341948 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
PCDHB13-201ENST00000341948 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
PCDHB13-201ENST00000341948 BECN1Q14457 450 aa19.47■□□□□ 0.71
PCDHB13-201ENST00000341948 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
PCDHB13-201ENST00000341948 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
PCDHB13-201ENST00000341948 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
PCDHB13-201ENST00000341948 SYNJ1O43426 1573 aa19.42■□□□□ 0.7
PCDHB13-201ENST00000341948 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
PCDHB13-201ENST00000341948 MS4A1P11836 297 aa19.42■□□□□ 0.7
PCDHB13-201ENST00000341948 CHMP4BQ9H444 224 aaKnown RBP19.42■□□□□ 0.7
PCDHB13-201ENST00000341948 UACAQ9BZF9 1416 aa19.41■□□□□ 0.7
PCDHB13-201ENST00000341948 KIF15Q9NS87 1388 aa19.41■□□□□ 0.7
PCDHB13-201ENST00000341948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.7
PCDHB13-201ENST00000341948 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
PCDHB13-201ENST00000341948 RALBP1Q15311 655 aa19.4■□□□□ 0.7
PCDHB13-201ENST00000341948 SYNJ2O15056 1496 aa19.4■□□□□ 0.7
PCDHB13-201ENST00000341948 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
PCDHB13-201ENST00000341948 OS9Q13438 667 aaPredicted RBP19.4■□□□□ 0.7
PCDHB13-201ENST00000341948 CUX1P39880 1505 aa19.38■□□□□ 0.69
PCDHB13-201ENST00000341948 FGD6Q6ZV73 1430 aa19.38■□□□□ 0.69
PCDHB13-201ENST00000341948 AMPHP49418 695 aa19.37■□□□□ 0.69
PCDHB13-201ENST00000341948 CASKIN1Q8WXD9 1431 aa19.37■□□□□ 0.69
PCDHB13-201ENST00000341948 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
PCDHB13-201ENST00000341948 LTV1Q96GA3 475 aaPredicted RBP19.35■□□□□ 0.69
PCDHB13-201ENST00000341948 KIF21BO75037 1637 aa19.35■□□□□ 0.69
PCDHB13-201ENST00000341948 RGS3P49796 1198 aa19.34■□□□□ 0.69
PCDHB13-201ENST00000341948 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
PCDHB13-201ENST00000341948 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
PCDHB13-201ENST00000341948 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
PCDHB13-201ENST00000341948 ZNF330Q9Y3S2 320 aaPredicted RBP19.33■□□□□ 0.69
PCDHB13-201ENST00000341948 B4GALNT3Q6L9W6 998 aa19.33■□□□□ 0.68
PCDHB13-201ENST00000341948 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
PCDHB13-201ENST00000341948 CASC1Q6TDU7 716 aa19.32■□□□□ 0.68
PCDHB13-201ENST00000341948 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
PCDHB13-201ENST00000341948 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
PCDHB13-201ENST00000341948 LRRC9Q6ZRR7 1453 aa19.31■□□□□ 0.68
PCDHB13-201ENST00000341948 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
PCDHB13-201ENST00000341948 NCOA2Q15596 1464 aa19.3■□□□□ 0.68
PCDHB13-201ENST00000341948 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
PCDHB13-201ENST00000341948 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCDHB13-201ENST00000341948 TOP2BQ02880 1626 aa19.3■□□□□ 0.68
PCDHB13-201ENST00000341948 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
PCDHB13-201ENST00000341948 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
PCDHB13-201ENST00000341948 GOLGA2Q08379 1002 aa19.28■□□□□ 0.68
PCDHB13-201ENST00000341948 GOLGA6L22H0YM25 854 aa19.27■□□□□ 0.68
PCDHB13-201ENST00000341948 PANK3Q9H999 370 aa19.27■□□□□ 0.68
PCDHB13-201ENST00000341948 FYCO1Q9BQS8 1478 aa19.27■□□□□ 0.68
PCDHB13-201ENST00000341948 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
PCDHB13-201ENST00000341948 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
PCDHB13-201ENST00000341948 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
PCDHB13-201ENST00000341948 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
PCDHB13-201ENST00000341948 ANP32EQ9BTT0 268 aa19.25■□□□□ 0.67
PCDHB13-201ENST00000341948 NCLP19338 710 aaKnown RBP19.25■□□□□ 0.67
PCDHB13-201ENST00000341948 IPO8O15397 1037 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms