RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
HIF1A-202ENST00000337138 KIF14Q15058 1648 aa14.29□□□□□ -0.12
HIF1A-202ENST00000337138 ROCK1Q13464 1354 aa14.29□□□□□ -0.12
HIF1A-202ENST00000337138 CCER2I3L3R5 266 aa14.28□□□□□ -0.12
HIF1A-202ENST00000337138 IRX6P78412 446 aaPredicted RBP14.28□□□□□ -0.12
HIF1A-202ENST00000337138 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
HIF1A-202ENST00000337138 PZPP20742 1482 aa14.28□□□□□ -0.12
HIF1A-202ENST00000337138 RPRD2Q5VT52 1461 aaKnown RBP14.28□□□□□ -0.12
HIF1A-202ENST00000337138 ADGRL2O95490 1459 aa14.27□□□□□ -0.13
HIF1A-202ENST00000337138 ITSN2Q9NZM3 1697 aa14.27□□□□□ -0.13
HIF1A-202ENST00000337138 ARID3CA6NKF2 412 aa14.27□□□□□ -0.13
HIF1A-202ENST00000337138 ABCC5O15440 1437 aa14.26□□□□□ -0.13
HIF1A-202ENST00000337138 NCOA1Q15788 1441 aa14.26□□□□□ -0.13
HIF1A-202ENST00000337138 DAPK1P53355 1430 aa14.25□□□□□ -0.13
HIF1A-202ENST00000337138 KDM5CP41229 1560 aa14.24□□□□□ -0.13
HIF1A-202ENST00000337138 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
HIF1A-202ENST00000337138 ANKRD30BQ9BXX2 1392 aa14.24□□□□□ -0.13
HIF1A-202ENST00000337138 ANP32CO43423 234 aa14.24□□□□□ -0.13
HIF1A-202ENST00000337138 ABCA8O94911 1581 aa14.24□□□□□ -0.13
HIF1A-202ENST00000337138 KDM5DQ9BY66 1539 aa14.24□□□□□ -0.13
HIF1A-202ENST00000337138 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
HIF1A-202ENST00000337138 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
HIF1A-202ENST00000337138 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
HIF1A-202ENST00000337138 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.13
HIF1A-202ENST00000337138 FBLN2P98095 1184 aa14.2□□□□□ -0.14
HIF1A-202ENST00000337138 ABCC10Q5T3U5 1492 aa14.19□□□□□ -0.14
HIF1A-202ENST00000337138 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
HIF1A-202ENST00000337138 POLR3GLQ9BT43 218 aa14.18□□□□□ -0.14
HIF1A-202ENST00000337138 SENP3-EIF4A1A0A087X0R7 540 aa14.18□□□□□ -0.14
HIF1A-202ENST00000337138 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
HIF1A-202ENST00000337138 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
HIF1A-202ENST00000337138 GPATCH8Q9UKJ3 1502 aaKnown RBP14.16□□□□□ -0.14
HIF1A-202ENST00000337138 NUP160Q12769 1436 aa14.16□□□□□ -0.14
HIF1A-202ENST00000337138 HNRNPUQ00839 825 aaKnown RBP eCLIP14.15□□□□□ -0.147e-6■□□□□ 10.8
HIF1A-202ENST00000337138 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
HIF1A-202ENST00000337138 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
HIF1A-202ENST00000337138 PTPRGP23470 1445 aa14.13□□□□□ -0.15
HIF1A-202ENST00000337138 DHX29Q7Z478 1369 aaKnown RBP14.12□□□□□ -0.15
HIF1A-202ENST00000337138 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
HIF1A-202ENST00000337138 SHROOM2Q13796 1616 aa14.12□□□□□ -0.15
HIF1A-202ENST00000337138 UHRF1BP1Q6BDS2 1440 aa14.11□□□□□ -0.15
HIF1A-202ENST00000337138 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
HIF1A-202ENST00000337138 TONSLQ96HA7 1378 aa14.11□□□□□ -0.15
HIF1A-202ENST00000337138 ARHGEF5Q12774 1597 aa14.11□□□□□ -0.15
HIF1A-202ENST00000337138 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
HIF1A-202ENST00000337138 NBPF8Q3BBV2 869 aa14.09□□□□□ -0.15
HIF1A-202ENST00000337138 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.15
HIF1A-202ENST00000337138 MYO5CQ9NQX4 1742 aa14.08□□□□□ -0.15
HIF1A-202ENST00000337138 LAMC1P11047 1609 aa14.08□□□□□ -0.16
HIF1A-202ENST00000337138 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
HIF1A-202ENST00000337138 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
HIF1A-202ENST00000337138 UNC13BO14795 1591 aa14.07□□□□□ -0.16
HIF1A-202ENST00000337138 PLB1Q6P1J6 1458 aa14.07□□□□□ -0.16
HIF1A-202ENST00000337138 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
HIF1A-202ENST00000337138 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
HIF1A-202ENST00000337138 MAST1Q9Y2H9 1570 aa14.06□□□□□ -0.16
HIF1A-202ENST00000337138 CCDC7Q96M83 1385 aa14.06□□□□□ -0.16
HIF1A-202ENST00000337138 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
HIF1A-202ENST00000337138 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
HIF1A-202ENST00000337138 RBM19Q9Y4C8 960 aaKnown RBP14.06□□□□□ -0.16
HIF1A-202ENST00000337138 SAMD9LQ8IVG5 1584 aa14.06□□□□□ -0.16
HIF1A-202ENST00000337138 ARHGEF12Q9NZN5 1544 aa14.05□□□□□ -0.16
HIF1A-202ENST00000337138 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
HIF1A-202ENST00000337138 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
HIF1A-202ENST00000337138 ZNF644Q9H582 1327 aaPredicted RBP14.03□□□□□ -0.16
HIF1A-202ENST00000337138 ZNF326Q5BKZ1 582 aaKnown RBP14.03□□□□□ -0.16
HIF1A-202ENST00000337138 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
HIF1A-202ENST00000337138 FOXD1Q16676 465 aa14.02□□□□□ -0.17
HIF1A-202ENST00000337138 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
HIF1A-202ENST00000337138 RALGAPBQ86X10 1494 aa14.01□□□□□ -0.17
HIF1A-202ENST00000337138 MAGI2Q86UL8 1455 aa14.01□□□□□ -0.17
HIF1A-202ENST00000337138 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
HIF1A-202ENST00000337138 ATP10BO94823 1461 aa13.99□□□□□ -0.17
HIF1A-202ENST00000337138 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
HIF1A-202ENST00000337138 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
HIF1A-202ENST00000337138 IQGAP3Q86VI3 1631 aa13.98□□□□□ -0.17
HIF1A-202ENST00000337138 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
HIF1A-202ENST00000337138 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
HIF1A-202ENST00000337138 CHD1O14646 1710 aa13.95□□□□□ -0.18
HIF1A-202ENST00000337138 TTC37Q6PGP7 1564 aa13.95□□□□□ -0.18
HIF1A-202ENST00000337138 MSH5O43196 834 aa13.95□□□□□ -0.18
HIF1A-202ENST00000337138 PRKRIP1Q9H875 184 aaPredicted RBP13.95□□□□□ -0.18
HIF1A-202ENST00000337138 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
HIF1A-202ENST00000337138 PLA2R1Q13018 1463 aa13.94□□□□□ -0.18
HIF1A-202ENST00000337138 NBR1Q14596 966 aa13.94□□□□□ -0.18
HIF1A-202ENST00000337138 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
HIF1A-202ENST00000337138 RTL5Q5HYW3 569 aaPredicted RBP13.92□□□□□ -0.18
HIF1A-202ENST00000337138 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
HIF1A-202ENST00000337138 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
HIF1A-202ENST00000337138 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
HIF1A-202ENST00000337138 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
HIF1A-202ENST00000337138 IQGAP1P46940 1657 aa13.9□□□□□ -0.18
HIF1A-202ENST00000337138 ATP10AO60312 1499 aa13.9□□□□□ -0.18
HIF1A-202ENST00000337138 MYOM1P52179 1685 aa13.89□□□□□ -0.19
HIF1A-202ENST00000337138 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
HIF1A-202ENST00000337138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
HIF1A-202ENST00000337138 ZBED9Q6R2W3 1325 aa13.88□□□□□ -0.19
HIF1A-202ENST00000337138 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
HIF1A-202ENST00000337138 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
HIF1A-202ENST00000337138 EIF4G2P78344 907 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms