RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ADGRL2O95490 1459 aa15.29■□□□□ 0.04
CCDC172-201ENST00000333254 ABCC5O15440 1437 aa15.29■□□□□ 0.04
CCDC172-201ENST00000333254 ABCA8O94911 1581 aa15.29■□□□□ 0.04
CCDC172-201ENST00000333254 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
CCDC172-201ENST00000333254 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
CCDC172-201ENST00000333254 CAMSAP2Q08AD1 1489 aa15.25■□□□□ 0.03
CCDC172-201ENST00000333254 CDC42BPAQ5VT25 1732 aa15.25■□□□□ 0.03
CCDC172-201ENST00000333254 KIF14Q15058 1648 aa15.24■□□□□ 0.03
CCDC172-201ENST00000333254 GPATCH8Q9UKJ3 1502 aaKnown RBP15.24■□□□□ 0.03
CCDC172-201ENST00000333254 RPRD2Q5VT52 1461 aaKnown RBP15.23■□□□□ 0.03
CCDC172-201ENST00000333254 SHANK2Q9UPX8 1470 aa15.23■□□□□ 0.03
CCDC172-201ENST00000333254 RRP7BPQ9NSQ0 103 aa15.22■□□□□ 0.03
CCDC172-201ENST00000333254 PLB1Q6P1J6 1458 aa15.22■□□□□ 0.03
CCDC172-201ENST00000333254 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
CCDC172-201ENST00000333254 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
CCDC172-201ENST00000333254 DDX10Q13206 875 aaKnown RBP15.2■□□□□ 0.02
CCDC172-201ENST00000333254 TEX14Q8IWB6 1497 aa15.2■□□□□ 0.02
CCDC172-201ENST00000333254 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
CCDC172-201ENST00000333254 MPHOSPH9Q99550 1183 aa15.19■□□□□ 0.02
CCDC172-201ENST00000333254 ABCC10Q5T3U5 1492 aa15.19■□□□□ 0.02
CCDC172-201ENST00000333254 ARHGEF5Q12774 1597 aa15.18■□□□□ 0.02
CCDC172-201ENST00000333254 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
CCDC172-201ENST00000333254 CHIC2Q9UKJ5 165 aa15.17■□□□□ 0.02
CCDC172-201ENST00000333254 PZPP20742 1482 aa15.17■□□□□ 0.02
CCDC172-201ENST00000333254 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
CCDC172-201ENST00000333254 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
CCDC172-201ENST00000333254 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
CCDC172-201ENST00000333254 ANP32CO43423 234 aa15.15■□□□□ 0.02
CCDC172-201ENST00000333254 TRIM52Q96A61 297 aa15.14■□□□□ 0.01
CCDC172-201ENST00000333254 ATP10BO94823 1461 aa15.13■□□□□ 0.01
CCDC172-201ENST00000333254 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
CCDC172-201ENST00000333254 CHD1O14646 1710 aa15.12■□□□□ 0.01
CCDC172-201ENST00000333254 CFDP1Q9UEE9 299 aaPredicted RBP15.12■□□□□ 0.01
CCDC172-201ENST00000333254 PREX2Q70Z35 1606 aa15.12■□□□□ 0.01
CCDC172-201ENST00000333254 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
CCDC172-201ENST00000333254 ZNF644Q9H582 1327 aaPredicted RBP15.1■□□□□ 0.01
CCDC172-201ENST00000333254 SUPT16HQ9Y5B9 1047 aaKnown RBP15.09■□□□□ 0.01
CCDC172-201ENST00000333254 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
CCDC172-201ENST00000333254 EIF4G2P78344 907 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC172-201ENST00000333254 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
CCDC172-201ENST00000333254 CDC42BPBQ9Y5S2 1711 aa15.08■□□□□ 0
CCDC172-201ENST00000333254 MAST1Q9Y2H9 1570 aa15.07■□□□□ 0
CCDC172-201ENST00000333254 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
CCDC172-201ENST00000333254 L3MBTL2Q969R5 705 aa15.07■□□□□ 0
CCDC172-201ENST00000333254 KCNH8Q96L42 1107 aa15.07■□□□□ 0
CCDC172-201ENST00000333254 ARID3CA6NKF2 412 aa15.06■□□□□ 0
CCDC172-201ENST00000333254 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
CCDC172-201ENST00000333254 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
CCDC172-201ENST00000333254 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
CCDC172-201ENST00000333254 PTPRGP23470 1445 aa15.05■□□□□ 0
CCDC172-201ENST00000333254 C9orf84Q5VXU9 1444 aa15.05■□□□□ 0
CCDC172-201ENST00000333254 ANKRD50Q9ULJ7 1429 aa15.05■□□□□ 0
CCDC172-201ENST00000333254 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
CCDC172-201ENST00000333254 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
CCDC172-201ENST00000333254 HIRIP3Q9BW71 556 aaPredicted RBP15.03■□□□□ -0
CCDC172-201ENST00000333254 SAMD9LQ8IVG5 1584 aa15.03■□□□□ -0
CCDC172-201ENST00000333254 UHRF1BP1Q6BDS2 1440 aa15.02■□□□□ -0
CCDC172-201ENST00000333254 CCDC7Q96M83 1385 aa15.02■□□□□ -0
CCDC172-201ENST00000333254 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
CCDC172-201ENST00000333254 MYO5CQ9NQX4 1742 aa15.01□□□□□ -0.01
CCDC172-201ENST00000333254 FBLN2P98095 1184 aa15□□□□□ -0.01
CCDC172-201ENST00000333254 UNC13BO14795 1591 aa15□□□□□ -0.01
CCDC172-201ENST00000333254 PLXNC1O60486 1568 aa15□□□□□ -0.01
CCDC172-201ENST00000333254 RSPH4AQ5TD94 716 aa15□□□□□ -0.01
CCDC172-201ENST00000333254 KDM5CP41229 1560 aa14.99□□□□□ -0.01
CCDC172-201ENST00000333254 ABCC2Q92887 1545 aa14.99□□□□□ -0.01
CCDC172-201ENST00000333254 RALGAPBQ86X10 1494 aa14.98□□□□□ -0.01
CCDC172-201ENST00000333254 NBPF8Q3BBV2 869 aa14.97□□□□□ -0.01
CCDC172-201ENST00000333254 ARID4BQ4LE39 1312 aaPredicted RBP14.97□□□□□ -0.01
CCDC172-201ENST00000333254 PLEKHH2Q8IVE3 1493 aa14.97□□□□□ -0.01
CCDC172-201ENST00000333254 TTC37Q6PGP7 1564 aa14.95□□□□□ -0.02
CCDC172-201ENST00000333254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC172-201ENST00000333254 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
CCDC172-201ENST00000333254 BCORL1Q5H9F3 1711 aa14.93□□□□□ -0.02
CCDC172-201ENST00000333254 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
CCDC172-201ENST00000333254 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
CCDC172-201ENST00000333254 IQGAP3Q86VI3 1631 aa14.93□□□□□ -0.02
CCDC172-201ENST00000333254 TSPY4P0CV99 314 aa14.92□□□□□ -0.02
CCDC172-201ENST00000333254 TSPY10P0CW01 314 aa14.92□□□□□ -0.02
CCDC172-201ENST00000333254 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
CCDC172-201ENST00000333254 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
CCDC172-201ENST00000333254 LAMC1P11047 1609 aa14.91□□□□□ -0.02
CCDC172-201ENST00000333254 PKD2Q13563 968 aa14.91□□□□□ -0.02
CCDC172-201ENST00000333254 NUP155O75694 1391 aa14.91□□□□□ -0.02
CCDC172-201ENST00000333254 MAGI2Q86UL8 1455 aa14.9□□□□□ -0.02
CCDC172-201ENST00000333254 ARAP3Q8WWN8 1544 aa14.9□□□□□ -0.02
CCDC172-201ENST00000333254 SYCP2Q9BX26 1530 aa14.9□□□□□ -0.02
CCDC172-201ENST00000333254 KIF7Q2M1P5 1343 aa14.89□□□□□ -0.03
CCDC172-201ENST00000333254 PRKRIP1Q9H875 184 aaPredicted RBP14.89□□□□□ -0.03
CCDC172-201ENST00000333254 ROCK2O75116 1388 aaKnown RBP14.89□□□□□ -0.03
CCDC172-201ENST00000333254 NEFLP07196 543 aa14.88□□□□□ -0.03
CCDC172-201ENST00000333254 E9PCH4 1651 aa14.88□□□□□ -0.03
CCDC172-201ENST00000333254 ARHGAP5Q13017 1502 aa14.88□□□□□ -0.03
CCDC172-201ENST00000333254 USP47Q96K76 1375 aa14.88□□□□□ -0.03
CCDC172-201ENST00000333254 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
CCDC172-201ENST00000333254 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
CCDC172-201ENST00000333254 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
CCDC172-201ENST00000333254 DUOX2Q9NRD8 1548 aa14.87□□□□□ -0.03
CCDC172-201ENST00000333254 ATP10AO60312 1499 aa14.86□□□□□ -0.03
CCDC172-201ENST00000333254 MSH5O43196 834 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms