RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 KDM5CP41229 1560 aa12.7□□□□□ -0.38
CPNE8-201ENST00000331366 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
CPNE8-201ENST00000331366 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
CPNE8-201ENST00000331366 DAPK1P53355 1430 aa12.69□□□□□ -0.38
CPNE8-201ENST00000331366 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
CPNE8-201ENST00000331366 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
CPNE8-201ENST00000331366 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
CPNE8-201ENST00000331366 PZPP20742 1482 aa12.65□□□□□ -0.38
CPNE8-201ENST00000331366 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
CPNE8-201ENST00000331366 INSRP06213 1382 aa12.65□□□□□ -0.39
CPNE8-201ENST00000331366 SYNJ2O15056 1496 aa12.65□□□□□ -0.39
CPNE8-201ENST00000331366 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
CPNE8-201ENST00000331366 ERICH6BQ5W0A0 696 aa12.63□□□□□ -0.39
CPNE8-201ENST00000331366 ABCC5O15440 1437 aa12.63□□□□□ -0.39
CPNE8-201ENST00000331366 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
CPNE8-201ENST00000331366 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
CPNE8-201ENST00000331366 IQGAP3Q86VI3 1631 aa12.61□□□□□ -0.39
CPNE8-201ENST00000331366 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
CPNE8-201ENST00000331366 CNTLNQ9NXG0 1405 aa12.61□□□□□ -0.39
CPNE8-201ENST00000331366 ARAP3Q8WWN8 1544 aa12.6□□□□□ -0.39
CPNE8-201ENST00000331366 CDC42BPBQ9Y5S2 1711 aa12.6□□□□□ -0.39
CPNE8-201ENST00000331366 MTUS2Q5JR59 1369 aa12.6□□□□□ -0.39
CPNE8-201ENST00000331366 CDK13Q14004 1512 aaKnown RBP12.6□□□□□ -0.39
CPNE8-201ENST00000331366 ARID4BQ4LE39 1312 aaPredicted RBP12.6□□□□□ -0.39
CPNE8-201ENST00000331366 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
CPNE8-201ENST00000331366 ATP10AO60312 1499 aa12.59□□□□□ -0.39
CPNE8-201ENST00000331366 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
CPNE8-201ENST00000331366 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.39
CPNE8-201ENST00000331366 BCORL1Q5H9F3 1711 aa12.58□□□□□ -0.4
CPNE8-201ENST00000331366 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
CPNE8-201ENST00000331366 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
CPNE8-201ENST00000331366 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
CPNE8-201ENST00000331366 MYO5CQ9NQX4 1742 aa12.55□□□□□ -0.4
CPNE8-201ENST00000331366 EIF2AK4Q9P2K8 1649 aaKnown RBP12.55□□□□□ -0.4
CPNE8-201ENST00000331366 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
CPNE8-201ENST00000331366 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
CPNE8-201ENST00000331366 SAMD9LQ8IVG5 1584 aa12.5□□□□□ -0.41
CPNE8-201ENST00000331366 KIAA1107Q9UPP5 1409 aa12.49□□□□□ -0.41
CPNE8-201ENST00000331366 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
CPNE8-201ENST00000331366 PRDM15P57071 1507 aaPredicted RBP12.49□□□□□ -0.41
CPNE8-201ENST00000331366 IQGAP1P46940 1657 aa12.49□□□□□ -0.41
CPNE8-201ENST00000331366 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
CPNE8-201ENST00000331366 CEP152O94986 1710 aa12.48□□□□□ -0.41
CPNE8-201ENST00000331366 TONSLQ96HA7 1378 aa12.48□□□□□ -0.41
CPNE8-201ENST00000331366 WDR7Q9Y4E6 1490 aa12.48□□□□□ -0.41
CPNE8-201ENST00000331366 UHRF1BP1LA0JNW5 1464 aa12.47□□□□□ -0.41
CPNE8-201ENST00000331366 IFT172Q9UG01 1749 aa12.47□□□□□ -0.41
CPNE8-201ENST00000331366 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
CPNE8-201ENST00000331366 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
CPNE8-201ENST00000331366 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.42
CPNE8-201ENST00000331366 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
CPNE8-201ENST00000331366 CLASP1Q7Z460 1538 aa12.45□□□□□ -0.42
CPNE8-201ENST00000331366 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
CPNE8-201ENST00000331366 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
CPNE8-201ENST00000331366 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
CPNE8-201ENST00000331366 CHD1O14646 1710 aa12.43□□□□□ -0.42
CPNE8-201ENST00000331366 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
CPNE8-201ENST00000331366 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
CPNE8-201ENST00000331366 PLEKHH2Q8IVE3 1493 aa12.41□□□□□ -0.42
CPNE8-201ENST00000331366 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
CPNE8-201ENST00000331366 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
CPNE8-201ENST00000331366 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
CPNE8-201ENST00000331366 WASHC2AQ641Q2 1341 aa12.39□□□□□ -0.43
CPNE8-201ENST00000331366 ATP10BO94823 1461 aa12.39□□□□□ -0.43
CPNE8-201ENST00000331366 SIN3AQ96ST3 1273 aa12.38□□□□□ -0.43
CPNE8-201ENST00000331366 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
CPNE8-201ENST00000331366 ABCA9Q8IUA7 1624 aa12.38□□□□□ -0.43
CPNE8-201ENST00000331366 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
CPNE8-201ENST00000331366 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
CPNE8-201ENST00000331366 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
CPNE8-201ENST00000331366 INO80Q9ULG1 1556 aaPredicted RBP12.37□□□□□ -0.43
CPNE8-201ENST00000331366 MADDQ8WXG6 1647 aa12.36□□□□□ -0.43
CPNE8-201ENST00000331366 ERBINQ96RT1 1412 aa12.36□□□□□ -0.43
CPNE8-201ENST00000331366 MYOM1P52179 1685 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
CPNE8-201ENST00000331366 SYNMO15061 1565 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 TET3O43151 1660 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 ABCC1P33527 1531 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
CPNE8-201ENST00000331366 USP32Q8NFA0 1604 aa12.34□□□□□ -0.43
CPNE8-201ENST00000331366 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
CPNE8-201ENST00000331366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPNE8-201ENST00000331366 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.44
CPNE8-201ENST00000331366 TRPM2O94759 1503 aa12.33□□□□□ -0.44
CPNE8-201ENST00000331366 PLB1Q6P1J6 1458 aa12.32□□□□□ -0.44
CPNE8-201ENST00000331366 ANP32CO43423 234 aa12.32□□□□□ -0.44
CPNE8-201ENST00000331366 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
CPNE8-201ENST00000331366 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
CPNE8-201ENST00000331366 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
CPNE8-201ENST00000331366 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
CPNE8-201ENST00000331366 ZCCHC11Q5TAX3 1644 aaKnown RBP12.31□□□□□ -0.44
CPNE8-201ENST00000331366 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
CPNE8-201ENST00000331366 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
CPNE8-201ENST00000331366 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-201ENST00000331366 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
CPNE8-201ENST00000331366 RTEL1-TNFRSF6BF6WH68 1400 aa12.29□□□□□ -0.44
CPNE8-201ENST00000331366 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
CPNE8-201ENST00000331366 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms