RNA–Protein interactions for RNA: ENST00000329798.5

FREM3-201, Transcript of FRAS1 related extracellular matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM3, Length 6,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-201ENST00000329798 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
FREM3-201ENST00000329798 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
FREM3-201ENST00000329798 ANP32AP39687 249 aaKnown RBP16.26■□□□□ 0.19
FREM3-201ENST00000329798 ATF3P18847 181 aa16.25■□□□□ 0.19
FREM3-201ENST00000329798 NUP155O75694 1391 aa16.24■□□□□ 0.19
FREM3-201ENST00000329798 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
FREM3-201ENST00000329798 AMPHP49418 695 aa16.23■□□□□ 0.19
FREM3-201ENST00000329798 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
FREM3-201ENST00000329798 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
FREM3-201ENST00000329798 PIP4K2BP78356 416 aa16.23■□□□□ 0.19
FREM3-201ENST00000329798 FOXD1Q16676 465 aa16.22■□□□□ 0.19
FREM3-201ENST00000329798 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
FREM3-201ENST00000329798 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
FREM3-201ENST00000329798 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
FREM3-201ENST00000329798 ARHGAP35Q9NRY4 1499 aa16.21■□□□□ 0.19
FREM3-201ENST00000329798 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
FREM3-201ENST00000329798 CCDC136Q96JN2 1154 aa16.2■□□□□ 0.18
FREM3-201ENST00000329798 SIN3AQ96ST3 1273 aa16.19■□□□□ 0.18
FREM3-201ENST00000329798 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
FREM3-201ENST00000329798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
FREM3-201ENST00000329798 ANP32BQ92688 251 aaKnown RBP16.17■□□□□ 0.18
FREM3-201ENST00000329798 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
FREM3-201ENST00000329798 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
FREM3-201ENST00000329798 CASC1Q6TDU7 716 aa16.17■□□□□ 0.18
FREM3-201ENST00000329798 CLSTN1O94985 981 aa16.16■□□□□ 0.18
FREM3-201ENST00000329798 PSME1Q06323 249 aa16.16■□□□□ 0.18
FREM3-201ENST00000329798 RSPH4AQ5TD94 716 aa16.16■□□□□ 0.18
FREM3-201ENST00000329798 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
FREM3-201ENST00000329798 FGD1P98174 961 aa16.15■□□□□ 0.18
FREM3-201ENST00000329798 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
FREM3-201ENST00000329798 FKBP8Q14318 412 aa16.15■□□□□ 0.18
FREM3-201ENST00000329798 WIZO95785 1651 aa16.15■□□□□ 0.18
FREM3-201ENST00000329798 TAF7LQ5H9L4 462 aa16.15■□□□□ 0.18
FREM3-201ENST00000329798 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
FREM3-201ENST00000329798 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
FREM3-201ENST00000329798 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
FREM3-201ENST00000329798 KCNJ4P48050 445 aa16.13■□□□□ 0.17
FREM3-201ENST00000329798 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
FREM3-201ENST00000329798 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
FREM3-201ENST00000329798 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
FREM3-201ENST00000329798 TRAK1Q9UPV9 953 aa16.12■□□□□ 0.17
FREM3-201ENST00000329798 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
FREM3-201ENST00000329798 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
FREM3-201ENST00000329798 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
FREM3-201ENST00000329798 TPRNQ4KMQ1 711 aa16.1■□□□□ 0.17
FREM3-201ENST00000329798 ROCK2O75116 1388 aaKnown RBP16.1■□□□□ 0.17
FREM3-201ENST00000329798 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
FREM3-201ENST00000329798 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.17
FREM3-201ENST00000329798 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
FREM3-201ENST00000329798 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
FREM3-201ENST00000329798 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
FREM3-201ENST00000329798 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
FREM3-201ENST00000329798 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.16
FREM3-201ENST00000329798 GORABQ5T7V8 394 aa16.06■□□□□ 0.16
FREM3-201ENST00000329798 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
FREM3-201ENST00000329798 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
FREM3-201ENST00000329798 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
FREM3-201ENST00000329798 C1orf141Q5JVX7 400 aa16.04■□□□□ 0.16
FREM3-201ENST00000329798 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.04■□□□□ 0.16
FREM3-201ENST00000329798 RAD54L2Q9Y4B4 1467 aa16.04■□□□□ 0.16
FREM3-201ENST00000329798 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
FREM3-201ENST00000329798 CHMP4BQ9H444 224 aaKnown RBP16.03■□□□□ 0.16
FREM3-201ENST00000329798 MINK1Q8N4C8 1332 aaPredicted RBP16.02■□□□□ 0.15
FREM3-201ENST00000329798 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
FREM3-201ENST00000329798 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
FREM3-201ENST00000329798 NCLP19338 710 aaKnown RBP16.01■□□□□ 0.15
FREM3-201ENST00000329798 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
FREM3-201ENST00000329798 PRDM2Q13029 1718 aa16■□□□□ 0.15
FREM3-201ENST00000329798 KANK4Q5T7N3 995 aaPredicted RBP15.99■□□□□ 0.15
FREM3-201ENST00000329798 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
FREM3-201ENST00000329798 STK31Q9BXU1 1019 aa15.99■□□□□ 0.15
FREM3-201ENST00000329798 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
FREM3-201ENST00000329798 APBB1O00213 710 aa15.98■□□□□ 0.15
FREM3-201ENST00000329798 COG3Q96JB2 828 aa15.97■□□□□ 0.15
FREM3-201ENST00000329798 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
FREM3-201ENST00000329798 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
FREM3-201ENST00000329798 MS4A1P11836 297 aa15.97■□□□□ 0.15
FREM3-201ENST00000329798 TXNDC2Q86VQ3 553 aa15.97■□□□□ 0.15
FREM3-201ENST00000329798 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
FREM3-201ENST00000329798 TTC5Q8N0Z6 440 aa15.96■□□□□ 0.15
FREM3-201ENST00000329798 NGEFQ8N5V2 710 aa15.96■□□□□ 0.15
FREM3-201ENST00000329798 CHMP4AQ9BY43 222 aa15.95■□□□□ 0.14
FREM3-201ENST00000329798 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
FREM3-201ENST00000329798 NUTM2GQ5VZR2 741 aa15.94■□□□□ 0.14
FREM3-201ENST00000329798 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
FREM3-201ENST00000329798 NESP48681 1621 aa15.93■□□□□ 0.14
FREM3-201ENST00000329798 STRN4Q9NRL3 753 aa15.93■□□□□ 0.14
FREM3-201ENST00000329798 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
FREM3-201ENST00000329798 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
FREM3-201ENST00000329798 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
FREM3-201ENST00000329798 THEMISQ8N1K5 641 aaPredicted RBP15.91■□□□□ 0.14
FREM3-201ENST00000329798 POGZQ7Z3K3 1410 aa15.9■□□□□ 0.14
FREM3-201ENST00000329798 NLRP2Q9NX02 1062 aa15.9■□□□□ 0.14
FREM3-201ENST00000329798 TEFQ10587 303 aa15.89■□□□□ 0.13
FREM3-201ENST00000329798 SLC4A10Q6U841 1118 aa15.89■□□□□ 0.13
FREM3-201ENST00000329798 TRIM34Q9BYJ4 488 aa15.88■□□□□ 0.13
FREM3-201ENST00000329798 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
FREM3-201ENST00000329798 ANKLE2Q86XL3 938 aa15.88■□□□□ 0.13
FREM3-201ENST00000329798 CCDC144AA2RUR9 1427 aa15.88■□□□□ 0.13
FREM3-201ENST00000329798 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms