RNA–Protein interactions for RNA: ENST00000318837.6

IGSF3-201, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene IGSF3, Length 3,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-201ENST00000318837 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
IGSF3-201ENST00000318837 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
IGSF3-201ENST00000318837 CARMIL2Q6F5E8 1435 aa13.41□□□□□ -0.26
IGSF3-201ENST00000318837 PTPN23Q9H3S7 1636 aa13.4□□□□□ -0.26
IGSF3-201ENST00000318837 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
IGSF3-201ENST00000318837 CDK13Q14004 1512 aaKnown RBP13.39□□□□□ -0.27
IGSF3-201ENST00000318837 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
IGSF3-201ENST00000318837 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
IGSF3-201ENST00000318837 NUP155O75694 1391 aa13.38□□□□□ -0.27
IGSF3-201ENST00000318837 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
IGSF3-201ENST00000318837 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
IGSF3-201ENST00000318837 PRKRIP1Q9H875 184 aaPredicted RBP13.36□□□□□ -0.27
IGSF3-201ENST00000318837 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
IGSF3-201ENST00000318837 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
IGSF3-201ENST00000318837 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
IGSF3-201ENST00000318837 CNTLNQ9NXG0 1405 aa13.34□□□□□ -0.27
IGSF3-201ENST00000318837 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
IGSF3-201ENST00000318837 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
IGSF3-201ENST00000318837 PTPRGP23470 1445 aa13.31□□□□□ -0.28
IGSF3-201ENST00000318837 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
IGSF3-201ENST00000318837 EPRSP07814 1512 aaKnown RBP13.3□□□□□ -0.28
IGSF3-201ENST00000318837 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
IGSF3-201ENST00000318837 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
IGSF3-201ENST00000318837 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
IGSF3-201ENST00000318837 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
IGSF3-201ENST00000318837 CUL7Q14999 1698 aa13.29□□□□□ -0.28
IGSF3-201ENST00000318837 NBPF8Q3BBV2 869 aa13.29□□□□□ -0.28
IGSF3-201ENST00000318837 SUPT6HQ7KZ85 1726 aaKnown RBP13.28□□□□□ -0.28
IGSF3-201ENST00000318837 NBR1Q14596 966 aa13.28□□□□□ -0.28
IGSF3-201ENST00000318837 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.28
IGSF3-201ENST00000318837 EHBP1L1Q8N3D4 1523 aa13.27□□□□□ -0.28
IGSF3-201ENST00000318837 KIF7Q2M1P5 1343 aa13.26□□□□□ -0.29
IGSF3-201ENST00000318837 IQGAP2Q13576 1575 aa13.25□□□□□ -0.29
IGSF3-201ENST00000318837 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
IGSF3-201ENST00000318837 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
IGSF3-201ENST00000318837 NCOA1Q15788 1441 aa13.25□□□□□ -0.29
IGSF3-201ENST00000318837 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
IGSF3-201ENST00000318837 NOP58Q9Y2X3 529 aaKnown RBP13.24□□□□□ -0.29
IGSF3-201ENST00000318837 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
IGSF3-201ENST00000318837 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
IGSF3-201ENST00000318837 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
IGSF3-201ENST00000318837 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
IGSF3-201ENST00000318837 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
IGSF3-201ENST00000318837 KDM6BO15054 1643 aa13.21□□□□□ -0.29
IGSF3-201ENST00000318837 MAGI3Q5TCQ9 1506 aa13.21□□□□□ -0.3
IGSF3-201ENST00000318837 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
IGSF3-201ENST00000318837 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
IGSF3-201ENST00000318837 ANP32AP39687 249 aaKnown RBP13.2□□□□□ -0.3
IGSF3-201ENST00000318837 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
IGSF3-201ENST00000318837 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
IGSF3-201ENST00000318837 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
IGSF3-201ENST00000318837 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
IGSF3-201ENST00000318837 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
IGSF3-201ENST00000318837 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
IGSF3-201ENST00000318837 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
IGSF3-201ENST00000318837 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
IGSF3-201ENST00000318837 DAPK1P53355 1430 aa13.18□□□□□ -0.3
IGSF3-201ENST00000318837 ANKRD30BQ9BXX2 1392 aa13.18□□□□□ -0.3
IGSF3-201ENST00000318837 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
IGSF3-201ENST00000318837 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
IGSF3-201ENST00000318837 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
IGSF3-201ENST00000318837 TCOF1Q13428 1488 aaKnown RBP13.17□□□□□ -0.3
IGSF3-201ENST00000318837 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
IGSF3-201ENST00000318837 GGT6Q6P531 493 aa13.17□□□□□ -0.3
IGSF3-201ENST00000318837 KIF3BO15066 747 aa13.16□□□□□ -0.3
IGSF3-201ENST00000318837 ABCC5O15440 1437 aa13.16□□□□□ -0.3
IGSF3-201ENST00000318837 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
IGSF3-201ENST00000318837 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
IGSF3-201ENST00000318837 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
IGSF3-201ENST00000318837 USP47Q96K76 1375 aa13.15□□□□□ -0.3
IGSF3-201ENST00000318837 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
IGSF3-201ENST00000318837 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
IGSF3-201ENST00000318837 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
IGSF3-201ENST00000318837 ARHGEF11O15085 1522 aa13.14□□□□□ -0.31
IGSF3-201ENST00000318837 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
IGSF3-201ENST00000318837 SMG6Q86US8 1419 aaKnown RBP13.14□□□□□ -0.31
IGSF3-201ENST00000318837 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
IGSF3-201ENST00000318837 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
IGSF3-201ENST00000318837 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
IGSF3-201ENST00000318837 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
IGSF3-201ENST00000318837 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
IGSF3-201ENST00000318837 IPO9Q96P70 1041 aaKnown RBP13.11□□□□□ -0.31
IGSF3-201ENST00000318837 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
IGSF3-201ENST00000318837 NUP153P49790 1475 aaKnown RBP13.11□□□□□ -0.31
IGSF3-201ENST00000318837 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
IGSF3-201ENST00000318837 KNSTRNQ9Y448 316 aa13.1□□□□□ -0.31
IGSF3-201ENST00000318837 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
IGSF3-201ENST00000318837 SPATA31E1Q6ZUB1 1445 aa13.1□□□□□ -0.31
IGSF3-201ENST00000318837 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
IGSF3-201ENST00000318837 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
IGSF3-201ENST00000318837 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
IGSF3-201ENST00000318837 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
IGSF3-201ENST00000318837 CCDC144AA2RUR9 1427 aa13.08□□□□□ -0.32
IGSF3-201ENST00000318837 DHX29Q7Z478 1369 aaKnown RBP13.08□□□□□ -0.32
IGSF3-201ENST00000318837 RSPH4AQ5TD94 716 aa13.08□□□□□ -0.32
IGSF3-201ENST00000318837 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
IGSF3-201ENST00000318837 TMF1P82094 1093 aa13.07□□□□□ -0.32
IGSF3-201ENST00000318837 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
IGSF3-201ENST00000318837 ADAMTS12P58397 1594 aa13.06□□□□□ -0.32
IGSF3-201ENST00000318837 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms