RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
SOX30-202ENST00000311371 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
SOX30-202ENST00000311371 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
SOX30-202ENST00000311371 HSPA5P11021 654 aaKnown RBP21.58■■□□□ 1.05
SOX30-202ENST00000311371 CUL7Q14999 1698 aa21.57■■□□□ 1.04
SOX30-202ENST00000311371 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
SOX30-202ENST00000311371 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
SOX30-202ENST00000311371 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
SOX30-202ENST00000311371 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
SOX30-202ENST00000311371 HSP90AA2PQ14568 343 aaPredicted RBP21.54■■□□□ 1.04
SOX30-202ENST00000311371 DAXXQ9UER7 740 aaPredicted RBP21.54■■□□□ 1.04
SOX30-202ENST00000311371 RRAGDQ9NQL2 400 aaPredicted RBP21.53■■□□□ 1.04
SOX30-202ENST00000311371 CNTLNQ9NXG0 1405 aa21.52■■□□□ 1.04
SOX30-202ENST00000311371 NAP1L5Q96NT1 182 aaPredicted RBP21.51■■□□□ 1.03
SOX30-202ENST00000311371 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
SOX30-202ENST00000311371 FRAT2O75474 233 aaPredicted RBP21.5■■□□□ 1.03
SOX30-202ENST00000311371 EXOC6Q8TAG9 804 aa21.49■■□□□ 1.03
SOX30-202ENST00000311371 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
SOX30-202ENST00000311371 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
SOX30-202ENST00000311371 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.03
SOX30-202ENST00000311371 SKAP1Q86WV1 359 aa21.45■■□□□ 1.02
SOX30-202ENST00000311371 MS4A1P11836 297 aa21.45■■□□□ 1.02
SOX30-202ENST00000311371 HSP90AA1P07900 732 aaKnown RBP21.43■■□□□ 1.02
SOX30-202ENST00000311371 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
SOX30-202ENST00000311371 RRP9O43818 475 aaKnown RBP21.41■■□□□ 1.02
SOX30-202ENST00000311371 NCOA2Q15596 1464 aa21.4■■□□□ 1.02
SOX30-202ENST00000311371 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
SOX30-202ENST00000311371 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
SOX30-202ENST00000311371 A0A0U1RQG5 324 aaPredicted RBP21.36■■□□□ 1.01
SOX30-202ENST00000311371 CTTNBP2Q8WZ74 1663 aa21.36■■□□□ 1.01
SOX30-202ENST00000311371 PNNQ9H307 717 aaKnown RBP21.35■■□□□ 1.01
SOX30-202ENST00000311371 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
SOX30-202ENST00000311371 RRP1P56182 461 aaKnown RBP21.35■■□□□ 1.01
SOX30-202ENST00000311371 ARXQ96QS3 562 aa21.35■■□□□ 1.01
SOX30-202ENST00000311371 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
SOX30-202ENST00000311371 FBLN2P98095 1184 aa21.34■■□□□ 1.01
SOX30-202ENST00000311371 POGKQ9P215 609 aa21.32■■□□□ 1
SOX30-202ENST00000311371 SYNJ2O15056 1496 aa21.31■■□□□ 1
SOX30-202ENST00000311371 GRIN2AQ12879 1464 aa21.3■■□□□ 1
SOX30-202ENST00000311371 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
SOX30-202ENST00000311371 TIAM1Q13009 1591 aa21.29■■□□□ 1
SOX30-202ENST00000311371 ATP1B4Q9UN42 357 aaPredicted RBP21.28■■□□□ 1
SOX30-202ENST00000311371 CHD1O14646 1710 aa21.28■■□□□ 1
SOX30-202ENST00000311371 KDM5BQ9UGL1 1544 aa21.28■■□□□ 1
SOX30-202ENST00000311371 LRRC9Q6ZRR7 1453 aa21.27■■□□□ 1
SOX30-202ENST00000311371 ARID4BQ4LE39 1312 aaPredicted RBP21.27■■□□□ 1
SOX30-202ENST00000311371 CCDC18Q5T9S5 1454 aa21.24■□□□□ 0.99
SOX30-202ENST00000311371 NCOA1Q15788 1441 aa21.24■□□□□ 0.99
SOX30-202ENST00000311371 RBM10P98175 930 aaKnown RBP21.23■□□□□ 0.99
SOX30-202ENST00000311371 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
SOX30-202ENST00000311371 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
SOX30-202ENST00000311371 L1TD1Q5T7N2 865 aaKnown RBP21.21■□□□□ 0.99
SOX30-202ENST00000311371 POLR3GLQ9BT43 218 aa21.21■□□□□ 0.99
SOX30-202ENST00000311371 KIF7Q2M1P5 1343 aa21.2■□□□□ 0.98
SOX30-202ENST00000311371 UACAQ9BZF9 1416 aa21.2■□□□□ 0.98
SOX30-202ENST00000311371 CLCN1P35523 988 aa21.18■□□□□ 0.98
SOX30-202ENST00000311371 IQGAP2Q13576 1575 aa21.17■□□□□ 0.98
SOX30-202ENST00000311371 PLIN1O60240 522 aa21.17■□□□□ 0.98
SOX30-202ENST00000311371 MAP3K1Q13233 1512 aa21.16■□□□□ 0.98
SOX30-202ENST00000311371 TMC1Q8TDI8 760 aa21.15■□□□□ 0.98
SOX30-202ENST00000311371 P3H3Q8IVL6 736 aa21.14■□□□□ 0.98
SOX30-202ENST00000311371 PNISRQ8TF01 805 aaKnown RBP21.13■□□□□ 0.97
SOX30-202ENST00000311371 NUP160Q12769 1436 aa21.13■□□□□ 0.97
SOX30-202ENST00000311371 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
SOX30-202ENST00000311371 XRCC6P12956 609 aaKnown RBP eCLIP21.11■□□□□ 0.97
SOX30-202ENST00000311371 L3MBTL2Q969R5 705 aa21.11■□□□□ 0.97
SOX30-202ENST00000311371 CRBNQ96SW2 442 aa21.11■□□□□ 0.97
SOX30-202ENST00000311371 PANK2Q9BZ23 570 aa21.11■□□□□ 0.97
SOX30-202ENST00000311371 AAMPQ13685 434 aa21.1■□□□□ 0.97
SOX30-202ENST00000311371 FAM161AQ3B820 660 aa21.09■□□□□ 0.97
SOX30-202ENST00000311371 C8orf34Q49A92 452 aa21.07■□□□□ 0.96
SOX30-202ENST00000311371 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
SOX30-202ENST00000311371 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
SOX30-202ENST00000311371 FHOD3Q2V2M9 1422 aa21.06■□□□□ 0.96
SOX30-202ENST00000311371 GOLGA6L3A6NEY3 463 aa21.06■□□□□ 0.96
SOX30-202ENST00000311371 RGS3P49796 1198 aa21.06■□□□□ 0.96
SOX30-202ENST00000311371 EFCAB5A4FU69 1503 aa21.05■□□□□ 0.96
SOX30-202ENST00000311371 DHX29Q7Z478 1369 aaKnown RBP21.04■□□□□ 0.96
SOX30-202ENST00000311371 GZF1Q9H116 711 aaPredicted RBP21.04■□□□□ 0.96
SOX30-202ENST00000311371 HFM1A2PYH4 1435 aa21.03■□□□□ 0.96
SOX30-202ENST00000311371 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
SOX30-202ENST00000311371 UGGT2Q9NYU1 1516 aa21.03■□□□□ 0.96
SOX30-202ENST00000311371 FGD1P98174 961 aa21.02■□□□□ 0.96
SOX30-202ENST00000311371 NBPF8Q3BBV2 869 aa21.02■□□□□ 0.96
SOX30-202ENST00000311371 PRDM4Q9UKN5 801 aa21.02■□□□□ 0.96
SOX30-202ENST00000311371 PDCL3Q9H2J4 239 aa21.01■□□□□ 0.95
SOX30-202ENST00000311371 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
SOX30-202ENST00000311371 CDCA7LQ96GN5 454 aa21■□□□□ 0.95
SOX30-202ENST00000311371 FOXD1Q16676 465 aa20.99■□□□□ 0.95
SOX30-202ENST00000311371 DISP1Q96F81 1524 aa20.99■□□□□ 0.95
SOX30-202ENST00000311371 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
SOX30-202ENST00000311371 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
SOX30-202ENST00000311371 KTN1Q86UP2 1357 aaKnown RBP20.98■□□□□ 0.95
SOX30-202ENST00000311371 NAIPQ13075 1403 aa20.98■□□□□ 0.95
SOX30-202ENST00000311371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
SOX30-202ENST00000311371 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
SOX30-202ENST00000311371 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
SOX30-202ENST00000311371 RRP7BPQ9NSQ0 103 aa20.96■□□□□ 0.95
SOX30-202ENST00000311371 C20orf194Q5TEA3 1177 aa20.96■□□□□ 0.95
SOX30-202ENST00000311371 ESPNB1AK53 854 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms