RNA–Protein interactions for RNA: ENST00000298910.11

LRRK2-201, Transcript of leucine rich repeat kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRK2, Length 9,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-201ENST00000298910 GRIN2BQ13224 1484 aa7.84□□□□□ -1.15
LRRK2-201ENST00000298910 PTPN23Q9H3S7 1636 aa7.84□□□□□ -1.15
LRRK2-201ENST00000298910 DCAF11Q8TEB1 546 aa7.84□□□□□ -1.15
LRRK2-201ENST00000298910 PKD2Q13563 968 aa7.84□□□□□ -1.15
LRRK2-201ENST00000298910 UPF2Q9HAU5 1272 aaKnown RBP7.84□□□□□ -1.15
LRRK2-201ENST00000298910 NESP48681 1621 aa7.84□□□□□ -1.15
LRRK2-201ENST00000298910 KANK1Q14678 1352 aa7.84□□□□□ -1.16
LRRK2-201ENST00000298910 IQGAP2Q13576 1575 aa7.83□□□□□ -1.16
LRRK2-201ENST00000298910 FOXD1Q16676 465 aa7.83□□□□□ -1.16
LRRK2-201ENST00000298910 RSPH4AQ5TD94 716 aa7.83□□□□□ -1.16
LRRK2-201ENST00000298910 NUP155O75694 1391 aa7.83□□□□□ -1.16
LRRK2-201ENST00000298910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.83□□□□□ -1.16
LRRK2-201ENST00000298910 ESF1Q9H501 851 aaKnown RBP7.83□□□□□ -1.16
LRRK2-201ENST00000298910 ROCK2O75116 1388 aaKnown RBP7.82□□□□□ -1.16
LRRK2-201ENST00000298910 TMF1P82094 1093 aa7.82□□□□□ -1.16
LRRK2-201ENST00000298910 L3MBTL2Q969R5 705 aa7.81□□□□□ -1.16
LRRK2-201ENST00000298910 MRC2Q9UBG0 1479 aa7.81□□□□□ -1.16
LRRK2-201ENST00000298910 WDR97A6NE52 1622 aa7.81□□□□□ -1.16
LRRK2-201ENST00000298910 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
LRRK2-201ENST00000298910 THOC2Q8NI27 1593 aaKnown RBP7.8□□□□□ -1.16
LRRK2-201ENST00000298910 PBRM1Q86U86 1689 aa7.8□□□□□ -1.16
LRRK2-201ENST00000298910 ANP32EQ9BTT0 268 aa7.8□□□□□ -1.16
LRRK2-201ENST00000298910 ITSN2Q9NZM3 1697 aa7.8□□□□□ -1.16
LRRK2-201ENST00000298910 KTN1Q86UP2 1357 aaKnown RBP7.79□□□□□ -1.16
LRRK2-201ENST00000298910 RALBP1Q15311 655 aa7.79□□□□□ -1.16
LRRK2-201ENST00000298910 DDRGK1Q96HY6 314 aa7.79□□□□□ -1.16
LRRK2-201ENST00000298910 HFM1A2PYH4 1435 aa7.79□□□□□ -1.16
LRRK2-201ENST00000298910 MIA2Q96PC5 1412 aa7.78□□□□□ -1.16
LRRK2-201ENST00000298910 IFT140Q96RY7 1462 aa7.78□□□□□ -1.16
LRRK2-201ENST00000298910 CFAP53Q96M91 514 aa7.77□□□□□ -1.17
LRRK2-201ENST00000298910 NBR1Q14596 966 aa7.76□□□□□ -1.17
LRRK2-201ENST00000298910 KIF15Q9NS87 1388 aa7.76□□□□□ -1.17
LRRK2-201ENST00000298910 CC2D1BQ5T0F9 858 aaKnown RBP7.76□□□□□ -1.17
LRRK2-201ENST00000298910 EFCAB2Q5VUJ9 269 aa7.76□□□□□ -1.17
LRRK2-201ENST00000298910 CCDC144AA2RUR9 1427 aa7.75□□□□□ -1.17
LRRK2-201ENST00000298910 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
LRRK2-201ENST00000298910 EIF3AQ14152 1382 aaKnown RBP7.75□□□□□ -1.17
LRRK2-201ENST00000298910 EPRSP07814 1512 aaKnown RBP7.75□□□□□ -1.17
LRRK2-201ENST00000298910 USP47Q96K76 1375 aa7.75□□□□□ -1.17
LRRK2-201ENST00000298910 HNRNPMP52272 730 aaKnown RBP eCLIP7.75□□□□□ -1.17
LRRK2-201ENST00000298910 RBM19Q9Y4C8 960 aaKnown RBP7.74□□□□□ -1.17
LRRK2-201ENST00000298910 ZBED9Q6R2W3 1325 aa7.73□□□□□ -1.17
LRRK2-201ENST00000298910 KIF14Q15058 1648 aa7.73□□□□□ -1.17
LRRK2-201ENST00000298910 PTPRGP23470 1445 aa7.73□□□□□ -1.17
LRRK2-201ENST00000298910 CNTLNQ9NXG0 1405 aa7.73□□□□□ -1.17
LRRK2-201ENST00000298910 HSP90AA1P07900 732 aaKnown RBP7.72□□□□□ -1.17
LRRK2-201ENST00000298910 SYNJ2O15056 1496 aa7.72□□□□□ -1.17
LRRK2-201ENST00000298910 BECN1Q14457 450 aa7.72□□□□□ -1.17
LRRK2-201ENST00000298910 NUDCQ9Y266 331 aa7.72□□□□□ -1.17
LRRK2-201ENST00000298910 URB2Q14146 1524 aaKnown RBP7.72□□□□□ -1.17
LRRK2-201ENST00000298910 PRKRIP1Q9H875 184 aaPredicted RBP7.72□□□□□ -1.17
LRRK2-201ENST00000298910 SNAPC4Q5SXM2 1469 aa7.71□□□□□ -1.17
LRRK2-201ENST00000298910 CDK13Q14004 1512 aaKnown RBP7.71□□□□□ -1.17
LRRK2-201ENST00000298910 NLRP13Q86W25 1043 aa7.71□□□□□ -1.18
LRRK2-201ENST00000298910 ARID4BQ4LE39 1312 aaPredicted RBP7.71□□□□□ -1.18
LRRK2-201ENST00000298910 NAIPQ13075 1403 aa7.71□□□□□ -1.18
LRRK2-201ENST00000298910 CCDC7Q96M83 1385 aa7.71□□□□□ -1.18
LRRK2-201ENST00000298910 NOP58Q9Y2X3 529 aaKnown RBP7.71□□□□□ -1.18
LRRK2-201ENST00000298910 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
LRRK2-201ENST00000298910 RAPGEF6Q8TEU7 1601 aa7.71□□□□□ -1.18
LRRK2-201ENST00000298910 ARHGAP5Q13017 1502 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 ANKRD50Q9ULJ7 1429 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
LRRK2-201ENST00000298910 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 DAPK1P53355 1430 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 TROQ12816 1431 aaPredicted RBP7.7□□□□□ -1.18
LRRK2-201ENST00000298910 MYH16Q9H6N6 1097 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 SPAG9O60271 1321 aaKnown RBP7.7□□□□□ -1.18
LRRK2-201ENST00000298910 MYBBP1AQ9BQG0 1328 aaKnown RBP7.7□□□□□ -1.18
LRRK2-201ENST00000298910 KIAA0586Q9BVV6 1533 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 SENP3-EIF4A1A0A087X0R7 540 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 PDE3BQ13370 1112 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 ROCK1Q13464 1354 aa7.7□□□□□ -1.18
LRRK2-201ENST00000298910 CFAP65Q6ZU64 1925 aaKnown RBP7.69□□□□□ -1.18
LRRK2-201ENST00000298910 BCL11AQ9H165 835 aa7.69□□□□□ -1.18
LRRK2-201ENST00000298910 ADGBQ8N7X0 1667 aa7.69□□□□□ -1.18
LRRK2-201ENST00000298910 FTSJ3Q8IY81 847 aaKnown RBP7.69□□□□□ -1.18
LRRK2-201ENST00000298910 GCC2Q8IWJ2 1684 aa7.68□□□□□ -1.18
LRRK2-201ENST00000298910 MS4A1P11836 297 aa7.68□□□□□ -1.18
LRRK2-201ENST00000298910 MAGI1Q96QZ7 1491 aaPredicted RBP7.68□□□□□ -1.18
LRRK2-201ENST00000298910 ST20-MTHFSA0A0A6YYL1 179 aa7.68□□□□□ -1.18
LRRK2-201ENST00000298910 C9orf84Q5VXU9 1444 aa7.68□□□□□ -1.18
LRRK2-201ENST00000298910 UGGT2Q9NYU1 1516 aa7.68□□□□□ -1.18
LRRK2-201ENST00000298910 ZNF644Q9H582 1327 aaPredicted RBP7.68□□□□□ -1.18
LRRK2-201ENST00000298910 ANP32BQ92688 251 aaKnown RBP7.68□□□□□ -1.18
LRRK2-201ENST00000298910 KIAA1107Q9UPP5 1409 aa7.68□□□□□ -1.18
LRRK2-201ENST00000298910 PPM1GO15355 546 aaPredicted RBP7.68□□□□□ -1.18
LRRK2-201ENST00000298910 EIF5BO60841 1220 aaKnown RBP7.68□□□□□ -1.18
LRRK2-201ENST00000298910 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
LRRK2-201ENST00000298910 MAPK8IP3Q9UPT6 1336 aa7.67□□□□□ -1.18
LRRK2-201ENST00000298910 MAPKBP1O60336 1514 aa7.67□□□□□ -1.18
LRRK2-201ENST00000298910 POGKQ9P215 609 aa7.66□□□□□ -1.18
LRRK2-201ENST00000298910 PLEKHH2Q8IVE3 1493 aa7.66□□□□□ -1.18
LRRK2-201ENST00000298910 ABCA5Q8WWZ7 1642 aa7.66□□□□□ -1.18
LRRK2-201ENST00000298910 CAMSAP2Q08AD1 1489 aa7.66□□□□□ -1.18
LRRK2-201ENST00000298910 KIF7Q2M1P5 1343 aa7.65□□□□□ -1.18
LRRK2-201ENST00000298910 CHMP4BQ9H444 224 aaKnown RBP7.65□□□□□ -1.18
LRRK2-201ENST00000298910 MORC1Q86VD1 984 aa7.65□□□□□ -1.18
LRRK2-201ENST00000298910 TCERG1O14776 1098 aaKnown RBP7.65□□□□□ -1.18
LRRK2-201ENST00000298910 GRIN2AQ12879 1464 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms