RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 BCL11AQ9H165 835 aa20.77■□□□□ 0.92
CAPN2-201ENST00000295006 MSH5O43196 834 aa20.76■□□□□ 0.91
CAPN2-201ENST00000295006 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
CAPN2-201ENST00000295006 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
CAPN2-201ENST00000295006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.74■□□□□ 0.91
CAPN2-201ENST00000295006 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
CAPN2-201ENST00000295006 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
CAPN2-201ENST00000295006 NUP155O75694 1391 aa20.73■□□□□ 0.91
CAPN2-201ENST00000295006 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
CAPN2-201ENST00000295006 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
CAPN2-201ENST00000295006 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
CAPN2-201ENST00000295006 ZBED9Q6R2W3 1325 aa20.68■□□□□ 0.9
CAPN2-201ENST00000295006 ZBTB47Q9UFB7 747 aaPredicted RBP20.66■□□□□ 0.9
CAPN2-201ENST00000295006 USP47Q96K76 1375 aa20.66■□□□□ 0.9
CAPN2-201ENST00000295006 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
CAPN2-201ENST00000295006 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.89
CAPN2-201ENST00000295006 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
CAPN2-201ENST00000295006 SUPT6HQ7KZ85 1726 aaKnown RBP20.63■□□□□ 0.89
CAPN2-201ENST00000295006 AKNAQ7Z591 1439 aa20.63■□□□□ 0.89
CAPN2-201ENST00000295006 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
CAPN2-201ENST00000295006 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
CAPN2-201ENST00000295006 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
CAPN2-201ENST00000295006 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
CAPN2-201ENST00000295006 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
CAPN2-201ENST00000295006 EPRSP07814 1512 aaKnown RBP20.62■□□□□ 0.89
CAPN2-201ENST00000295006 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
CAPN2-201ENST00000295006 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
CAPN2-201ENST00000295006 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
CAPN2-201ENST00000295006 CUL7Q14999 1698 aa20.57■□□□□ 0.88
CAPN2-201ENST00000295006 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
CAPN2-201ENST00000295006 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
CAPN2-201ENST00000295006 ANKRD30AQ9BXX3 1397 aa20.57■□□□□ 0.88
CAPN2-201ENST00000295006 PLIN1O60240 522 aa20.56■□□□□ 0.88
CAPN2-201ENST00000295006 DAPK1P53355 1430 aa20.55■□□□□ 0.88
CAPN2-201ENST00000295006 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
CAPN2-201ENST00000295006 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
CAPN2-201ENST00000295006 ERICH6BQ5W0A0 696 aa20.54■□□□□ 0.88
CAPN2-201ENST00000295006 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
CAPN2-201ENST00000295006 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
CAPN2-201ENST00000295006 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
CAPN2-201ENST00000295006 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.87
CAPN2-201ENST00000295006 MAGI3Q5TCQ9 1506 aa20.51■□□□□ 0.87
CAPN2-201ENST00000295006 ABCC5O15440 1437 aa20.51■□□□□ 0.87
CAPN2-201ENST00000295006 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
CAPN2-201ENST00000295006 RCAN3Q9UKA8 241 aa20.51■□□□□ 0.87
CAPN2-201ENST00000295006 CHGAP10645 457 aaKnown RBP20.5■□□□□ 0.87
CAPN2-201ENST00000295006 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
CAPN2-201ENST00000295006 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
CAPN2-201ENST00000295006 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
CAPN2-201ENST00000295006 MIA2Q96PC5 1412 aa20.48■□□□□ 0.87
CAPN2-201ENST00000295006 NBPF1Q3BBV0 1214 aa20.48■□□□□ 0.87
CAPN2-201ENST00000295006 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
CAPN2-201ENST00000295006 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
CAPN2-201ENST00000295006 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
CAPN2-201ENST00000295006 KDM6BO15054 1643 aa20.46■□□□□ 0.87
CAPN2-201ENST00000295006 PNISRQ8TF01 805 aaKnown RBP20.46■□□□□ 0.87
CAPN2-201ENST00000295006 ANKRD50Q9ULJ7 1429 aa20.45■□□□□ 0.86
CAPN2-201ENST00000295006 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
CAPN2-201ENST00000295006 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
CAPN2-201ENST00000295006 SKAP1Q86WV1 359 aa20.43■□□□□ 0.86
CAPN2-201ENST00000295006 PLB1Q6P1J6 1458 aa20.42■□□□□ 0.86
CAPN2-201ENST00000295006 PANK3Q9H999 370 aa20.42■□□□□ 0.86
CAPN2-201ENST00000295006 RPRD2Q5VT52 1461 aaKnown RBP20.41■□□□□ 0.86
CAPN2-201ENST00000295006 CANXP27824 592 aaKnown RBP20.41■□□□□ 0.86
CAPN2-201ENST00000295006 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
CAPN2-201ENST00000295006 CARMIL2Q6F5E8 1435 aa20.41■□□□□ 0.86
CAPN2-201ENST00000295006 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
CAPN2-201ENST00000295006 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
CAPN2-201ENST00000295006 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
CAPN2-201ENST00000295006 RGS3P49796 1198 aa20.4■□□□□ 0.86
CAPN2-201ENST00000295006 RALBP1Q15311 655 aa20.4■□□□□ 0.86
CAPN2-201ENST00000295006 NEUROD2Q15784 382 aa20.4■□□□□ 0.86
CAPN2-201ENST00000295006 NLRP13Q86W25 1043 aa20.39■□□□□ 0.86
CAPN2-201ENST00000295006 KIF15Q9NS87 1388 aa20.39■□□□□ 0.85
CAPN2-201ENST00000295006 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
CAPN2-201ENST00000295006 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
CAPN2-201ENST00000295006 RRP1P56182 461 aaKnown RBP20.38■□□□□ 0.85
CAPN2-201ENST00000295006 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
CAPN2-201ENST00000295006 IPO9Q96P70 1041 aaKnown RBP20.37■□□□□ 0.85
CAPN2-201ENST00000295006 TMF1P82094 1093 aa20.36■□□□□ 0.85
CAPN2-201ENST00000295006 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
CAPN2-201ENST00000295006 NEFMP07197 916 aa20.34■□□□□ 0.85
CAPN2-201ENST00000295006 TROQ12816 1431 aaPredicted RBP20.34■□□□□ 0.85
CAPN2-201ENST00000295006 ROCK1Q13464 1354 aa20.33■□□□□ 0.84
CAPN2-201ENST00000295006 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
CAPN2-201ENST00000295006 DENND4BO75064 1496 aaPredicted RBP20.31■□□□□ 0.84
CAPN2-201ENST00000295006 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
CAPN2-201ENST00000295006 SAMD9Q5K651 1589 aa20.3■□□□□ 0.84
CAPN2-201ENST00000295006 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
CAPN2-201ENST00000295006 CCDC144AA2RUR9 1427 aa20.3■□□□□ 0.84
CAPN2-201ENST00000295006 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
CAPN2-201ENST00000295006 PDE4AP27815 886 aa20.29■□□□□ 0.84
CAPN2-201ENST00000295006 NUP153P49790 1475 aaKnown RBP20.29■□□□□ 0.84
CAPN2-201ENST00000295006 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
CAPN2-201ENST00000295006 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
CAPN2-201ENST00000295006 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
CAPN2-201ENST00000295006 C9orf84Q5VXU9 1444 aa20.26■□□□□ 0.83
CAPN2-201ENST00000295006 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
CAPN2-201ENST00000295006 ABCA5Q8WWZ7 1642 aa20.25■□□□□ 0.83
CAPN2-201ENST00000295006 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms