RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
PCYT1A-201ENST00000292823 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
PCYT1A-201ENST00000292823 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
PCYT1A-201ENST00000292823 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
PCYT1A-201ENST00000292823 RALBP1Q15311 655 aa12.99□□□□□ -0.33
PCYT1A-201ENST00000292823 TMF1P82094 1093 aa12.98□□□□□ -0.33
PCYT1A-201ENST00000292823 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
PCYT1A-201ENST00000292823 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
PCYT1A-201ENST00000292823 RGL3Q3MIN7 710 aa12.97□□□□□ -0.33
PCYT1A-201ENST00000292823 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
PCYT1A-201ENST00000292823 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
PCYT1A-201ENST00000292823 CUL7Q14999 1698 aa12.97□□□□□ -0.33
PCYT1A-201ENST00000292823 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
PCYT1A-201ENST00000292823 HSP90AA1P07900 732 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-201ENST00000292823 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
PCYT1A-201ENST00000292823 POGKQ9P215 609 aa12.95□□□□□ -0.34
PCYT1A-201ENST00000292823 PKD2Q13563 968 aa12.95□□□□□ -0.34
PCYT1A-201ENST00000292823 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
PCYT1A-201ENST00000292823 SPAG9O60271 1321 aaKnown RBP12.94□□□□□ -0.34
PCYT1A-201ENST00000292823 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
PCYT1A-201ENST00000292823 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
PCYT1A-201ENST00000292823 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
PCYT1A-201ENST00000292823 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.347e-8■■■■□ 23.6
PCYT1A-201ENST00000292823 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
PCYT1A-201ENST00000292823 MYOM3Q5VTT5 1437 aa12.93□□□□□ -0.34
PCYT1A-201ENST00000292823 B4GALNT3Q6L9W6 998 aa12.93□□□□□ -0.34
PCYT1A-201ENST00000292823 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
PCYT1A-201ENST00000292823 NESP48681 1621 aa12.91□□□□□ -0.34
PCYT1A-201ENST00000292823 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
PCYT1A-201ENST00000292823 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
PCYT1A-201ENST00000292823 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
PCYT1A-201ENST00000292823 NUP155O75694 1391 aa12.9□□□□□ -0.34
PCYT1A-201ENST00000292823 MYH16Q9H6N6 1097 aa12.9□□□□□ -0.34
PCYT1A-201ENST00000292823 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
PCYT1A-201ENST00000292823 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
PCYT1A-201ENST00000292823 PHLDB1Q86UU1 1377 aa12.9□□□□□ -0.34
PCYT1A-201ENST00000292823 MS4A1P11836 297 aa12.9□□□□□ -0.34
PCYT1A-201ENST00000292823 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
PCYT1A-201ENST00000292823 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
PCYT1A-201ENST00000292823 KIF15Q9NS87 1388 aa12.88□□□□□ -0.35
PCYT1A-201ENST00000292823 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
PCYT1A-201ENST00000292823 SNAPC4Q5SXM2 1469 aa12.87□□□□□ -0.35
PCYT1A-201ENST00000292823 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
PCYT1A-201ENST00000292823 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
PCYT1A-201ENST00000292823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■■■■■ 48.1
PCYT1A-201ENST00000292823 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
PCYT1A-201ENST00000292823 FOXD1Q16676 465 aa12.86□□□□□ -0.35
PCYT1A-201ENST00000292823 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
PCYT1A-201ENST00000292823 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
PCYT1A-201ENST00000292823 PLEKHH2Q8IVE3 1493 aa12.85□□□□□ -0.35
PCYT1A-201ENST00000292823 BIVM-ERCC5R4GMW8 1640 aa12.85□□□□□ -0.35
PCYT1A-201ENST00000292823 GGT6Q6P531 493 aa12.85□□□□□ -0.35
PCYT1A-201ENST00000292823 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
PCYT1A-201ENST00000292823 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCYT1A-201ENST00000292823 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
PCYT1A-201ENST00000292823 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
PCYT1A-201ENST00000292823 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
PCYT1A-201ENST00000292823 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
PCYT1A-201ENST00000292823 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
PCYT1A-201ENST00000292823 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
PCYT1A-201ENST00000292823 MYBBP1AQ9BQG0 1328 aaKnown RBP12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 KIF3BO15066 747 aa12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 MLECQ14165 292 aa12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
PCYT1A-201ENST00000292823 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
PCYT1A-201ENST00000292823 EID1Q9Y6B2 187 aa12.8□□□□□ -0.36
PCYT1A-201ENST00000292823 WASHC2CQ9Y4E1 1318 aa12.8□□□□□ -0.36
PCYT1A-201ENST00000292823 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
PCYT1A-201ENST00000292823 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
PCYT1A-201ENST00000292823 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
PCYT1A-201ENST00000292823 IQGAP2Q13576 1575 aa12.78□□□□□ -0.36
PCYT1A-201ENST00000292823 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
PCYT1A-201ENST00000292823 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
PCYT1A-201ENST00000292823 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
PCYT1A-201ENST00000292823 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
PCYT1A-201ENST00000292823 USP47Q96K76 1375 aa12.77□□□□□ -0.36
PCYT1A-201ENST00000292823 CCDC7Q96M83 1385 aa12.77□□□□□ -0.36
PCYT1A-201ENST00000292823 HFM1A2PYH4 1435 aa12.77□□□□□ -0.37
PCYT1A-201ENST00000292823 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
PCYT1A-201ENST00000292823 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
PCYT1A-201ENST00000292823 MIA2Q96PC5 1412 aa12.76□□□□□ -0.37
PCYT1A-201ENST00000292823 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
PCYT1A-201ENST00000292823 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
PCYT1A-201ENST00000292823 LAS1LQ9Y4W2 734 aaKnown RBP12.75□□□□□ -0.37
PCYT1A-201ENST00000292823 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
PCYT1A-201ENST00000292823 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
PCYT1A-201ENST00000292823 RGS3P49796 1198 aa12.74□□□□□ -0.37
PCYT1A-201ENST00000292823 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
PCYT1A-201ENST00000292823 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
PCYT1A-201ENST00000292823 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
PCYT1A-201ENST00000292823 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.37
PCYT1A-201ENST00000292823 FRAT1Q92837 279 aaPredicted RBP12.71□□□□□ -0.37
PCYT1A-201ENST00000292823 PCF11O94913 1555 aaKnown RBP12.71□□□□□ -0.37
PCYT1A-201ENST00000292823 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
PCYT1A-201ENST00000292823 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCYT1A-201ENST00000292823 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
PCYT1A-201ENST00000292823 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms