RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 MLECQ14165 292 aa21.89■■□□□ 1.09
PSMB4-201ENST00000290541 UBAP1LF5GYI3 381 aa21.88■■□□□ 1.09
PSMB4-201ENST00000290541 CEBPAP49715 358 aaPredicted RBP21.88■■□□□ 1.09
PSMB4-201ENST00000290541 CTTNBP2Q8WZ74 1663 aa21.86■■□□□ 1.09
PSMB4-201ENST00000290541 GOLGA3Q08378 1498 aa21.84■■□□□ 1.09
PSMB4-201ENST00000290541 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
PSMB4-201ENST00000290541 NCOA1Q15788 1441 aa21.83■■□□□ 1.09
PSMB4-201ENST00000290541 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
PSMB4-201ENST00000290541 HECW1Q76N89 1606 aa21.82■■□□□ 1.08
PSMB4-201ENST00000290541 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
PSMB4-201ENST00000290541 HSPA1LP34931 641 aa21.79■■□□□ 1.08
PSMB4-201ENST00000290541 C3P01024 1663 aa21.78■■□□□ 1.08
PSMB4-201ENST00000290541 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
PSMB4-201ENST00000290541 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
PSMB4-201ENST00000290541 ZNF335Q9H4Z2 1342 aaPredicted RBP21.74■■□□□ 1.07
PSMB4-201ENST00000290541 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
PSMB4-201ENST00000290541 LOC105371045A0A1W2PR82 267 aa21.71■■□□□ 1.07
PSMB4-201ENST00000290541 ATP10AO60312 1499 aa21.71■■□□□ 1.07
PSMB4-201ENST00000290541 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
PSMB4-201ENST00000290541 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
PSMB4-201ENST00000290541 RAPGEF6Q8TEU7 1601 aa21.63■■□□□ 1.05
PSMB4-201ENST00000290541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.62■■□□□ 1.052e-13■■■□□ 17.2
PSMB4-201ENST00000290541 TRAPPC8Q9Y2L5 1435 aa21.62■■□□□ 1.05
PSMB4-201ENST00000290541 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
PSMB4-201ENST00000290541 P3H3Q8IVL6 736 aa21.58■■□□□ 1.05
PSMB4-201ENST00000290541 PIP4K2BP78356 416 aa21.57■■□□□ 1.04
PSMB4-201ENST00000290541 ALKQ9UM73 1620 aa21.55■■□□□ 1.04
PSMB4-201ENST00000290541 RGS17Q9UGC6 210 aaPredicted RBP21.55■■□□□ 1.04
PSMB4-201ENST00000290541 SAMD9Q5K651 1589 aa21.54■■□□□ 1.04
PSMB4-201ENST00000290541 NUP153P49790 1475 aaKnown RBP21.54■■□□□ 1.04
PSMB4-201ENST00000290541 SCAPERQ9BY12 1400 aa21.54■■□□□ 1.04
PSMB4-201ENST00000290541 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
PSMB4-201ENST00000290541 REREQ9P2R6 1566 aa21.53■■□□□ 1.04
PSMB4-201ENST00000290541 ZNF142P52746 1687 aaPredicted RBP21.51■■□□□ 1.03
PSMB4-201ENST00000290541 PLA2R1Q13018 1463 aa21.51■■□□□ 1.03
PSMB4-201ENST00000290541 TCOF1Q13428 1488 aaKnown RBP21.51■■□□□ 1.03
PSMB4-201ENST00000290541 DIP2CQ9Y2E4 1556 aa21.5■■□□□ 1.03
PSMB4-201ENST00000290541 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
PSMB4-201ENST00000290541 TOM1O60784 492 aa21.48■■□□□ 1.03
PSMB4-201ENST00000290541 SUPT6HQ7KZ85 1726 aaKnown RBP21.48■■□□□ 1.03
PSMB4-201ENST00000290541 AGLP35573 1532 aa21.47■■□□□ 1.03
PSMB4-201ENST00000290541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
PSMB4-201ENST00000290541 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
PSMB4-201ENST00000290541 KDM5CP41229 1560 aa21.46■■□□□ 1.03
PSMB4-201ENST00000290541 CPS1P31327 1500 aa21.45■■□□□ 1.02
PSMB4-201ENST00000290541 SETD1AO15047 1707 aaKnown RBP21.45■■□□□ 1.02
PSMB4-201ENST00000290541 NPATQ14207 1427 aa21.45■■□□□ 1.02
PSMB4-201ENST00000290541 MYO3AQ8NEV4 1616 aa21.44■■□□□ 1.02
PSMB4-201ENST00000290541 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
PSMB4-201ENST00000290541 CLIP1P30622 1438 aa21.43■■□□□ 1.02
PSMB4-201ENST00000290541 ABCA6Q8N139 1617 aa21.43■■□□□ 1.02
PSMB4-201ENST00000290541 PKD2Q13563 968 aa21.42■■□□□ 1.02
PSMB4-201ENST00000290541 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
PSMB4-201ENST00000290541 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
PSMB4-201ENST00000290541 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
PSMB4-201ENST00000290541 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.02
PSMB4-201ENST00000290541 PLCH2O75038 1416 aa21.39■■□□□ 1.02
PSMB4-201ENST00000290541 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
PSMB4-201ENST00000290541 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
PSMB4-201ENST00000290541 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
PSMB4-201ENST00000290541 PTPRKQ15262 1439 aa21.37■■□□□ 1.01
PSMB4-201ENST00000290541 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
PSMB4-201ENST00000290541 MYO5CQ9NQX4 1742 aa21.34■■□□□ 1.01
PSMB4-201ENST00000290541 SHANK2Q9UPX8 1470 aa21.33■■□□□ 1.01
PSMB4-201ENST00000290541 POTEAQ6S8J7 498 aa21.33■■□□□ 1.01
PSMB4-201ENST00000290541 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
PSMB4-201ENST00000290541 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
PSMB4-201ENST00000290541 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
PSMB4-201ENST00000290541 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
PSMB4-201ENST00000290541 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
PSMB4-201ENST00000290541 FMN1Q68DA7 1419 aa21.25■□□□□ 0.99
PSMB4-201ENST00000290541 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
PSMB4-201ENST00000290541 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
PSMB4-201ENST00000290541 RNF17Q9BXT8 1623 aaKnown RBP21.23■□□□□ 0.99
PSMB4-201ENST00000290541 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
PSMB4-201ENST00000290541 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
PSMB4-201ENST00000290541 EFCAB2Q5VUJ9 269 aa21.21■□□□□ 0.99
PSMB4-201ENST00000290541 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
PSMB4-201ENST00000290541 KIDINS220Q9ULH0 1771 aa21.2■□□□□ 0.98
PSMB4-201ENST00000290541 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
PSMB4-201ENST00000290541 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
PSMB4-201ENST00000290541 CASKIN1Q8WXD9 1431 aa21.17■□□□□ 0.98
PSMB4-201ENST00000290541 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
PSMB4-201ENST00000290541 UPF1Q92900 1129 aaKnown RBP eCLIP21.14■□□□□ 0.97
PSMB4-201ENST00000290541 LRRIQ1Q96JM4 1722 aa21.13■□□□□ 0.97
PSMB4-201ENST00000290541 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
PSMB4-201ENST00000290541 KIF14Q15058 1648 aa21.13■□□□□ 0.97
PSMB4-201ENST00000290541 SYNMO15061 1565 aa21.13■□□□□ 0.97
PSMB4-201ENST00000290541 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
PSMB4-201ENST00000290541 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
PSMB4-201ENST00000290541 LRRC7Q96NW7 1537 aa21.11■□□□□ 0.97
PSMB4-201ENST00000290541 ITSN2Q9NZM3 1697 aa21.11■□□□□ 0.97
PSMB4-201ENST00000290541 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
PSMB4-201ENST00000290541 ABCC1P33527 1531 aa21.09■□□□□ 0.97
PSMB4-201ENST00000290541 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
PSMB4-201ENST00000290541 DEPDC5O75140 1603 aa21.04■□□□□ 0.96
PSMB4-201ENST00000290541 MED14O60244 1454 aa21.03■□□□□ 0.96
PSMB4-201ENST00000290541 PLXNC1O60486 1568 aa21.02■□□□□ 0.95
PSMB4-201ENST00000290541 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
PSMB4-201ENST00000290541 XIRP1Q702N8 1843 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms