RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
SMARCA5-201ENST00000283131 CSPP1Q1MSJ5 1256 aa16.63■□□□□ 0.25
SMARCA5-201ENST00000283131 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
SMARCA5-201ENST00000283131 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
SMARCA5-201ENST00000283131 CCDC70Q6NSX1 233 aa16.61■□□□□ 0.25
SMARCA5-201ENST00000283131 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
SMARCA5-201ENST00000283131 PPP4R2Q9NY27 417 aa16.59■□□□□ 0.25
SMARCA5-201ENST00000283131 GPATCH3Q96I76 525 aa16.58■□□□□ 0.25
SMARCA5-201ENST00000283131 TPD52L1Q16890 204 aaPredicted RBP16.58■□□□□ 0.24
SMARCA5-201ENST00000283131 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
SMARCA5-201ENST00000283131 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
SMARCA5-201ENST00000283131 GPS2Q13227 327 aa16.57■□□□□ 0.24
SMARCA5-201ENST00000283131 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
SMARCA5-201ENST00000283131 TPM2P07951 284 aa16.56■□□□□ 0.24
SMARCA5-201ENST00000283131 TCEAL9Q9UHQ7 104 aa16.55■□□□□ 0.24
SMARCA5-201ENST00000283131 APBB1O00213 710 aa16.54■□□□□ 0.24
SMARCA5-201ENST00000283131 SOX12O15370 315 aa16.54■□□□□ 0.24
SMARCA5-201ENST00000283131 PHF14O94880 888 aa16.54■□□□□ 0.24
SMARCA5-201ENST00000283131 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
SMARCA5-201ENST00000283131 MIER1Q8N108 512 aa16.53■□□□□ 0.24
SMARCA5-201ENST00000283131 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
SMARCA5-201ENST00000283131 TPM1P09493 284 aa16.52■□□□□ 0.24
SMARCA5-201ENST00000283131 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMARCA5-201ENST00000283131 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.24
SMARCA5-201ENST00000283131 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.23
SMARCA5-201ENST00000283131 CCAR2Q8N163 923 aaKnown RBP16.51■□□□□ 0.23
SMARCA5-201ENST00000283131 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
SMARCA5-201ENST00000283131 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
SMARCA5-201ENST00000283131 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
SMARCA5-201ENST00000283131 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
SMARCA5-201ENST00000283131 DEKP35659 375 aaKnown RBP16.5■□□□□ 0.23
SMARCA5-201ENST00000283131 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
SMARCA5-201ENST00000283131 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
SMARCA5-201ENST00000283131 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
SMARCA5-201ENST00000283131 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.49■□□□□ 0.237e-8■■■■■ 186.3
SMARCA5-201ENST00000283131 HMMRO75330 724 aa16.48■□□□□ 0.23
SMARCA5-201ENST00000283131 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SMARCA5-201ENST00000283131 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
SMARCA5-201ENST00000283131 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
SMARCA5-201ENST00000283131 TOMM22Q9NS69 142 aa16.46■□□□□ 0.22
SMARCA5-201ENST00000283131 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
SMARCA5-201ENST00000283131 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
SMARCA5-201ENST00000283131 CTDP1Q9Y5B0 961 aaPredicted RBP16.44■□□□□ 0.22
SMARCA5-201ENST00000283131 IPO7O95373 1038 aaKnown RBP16.43■□□□□ 0.22
SMARCA5-201ENST00000283131 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
SMARCA5-201ENST00000283131 GOLGA6L3A6NEY3 463 aa16.43■□□□□ 0.22
SMARCA5-201ENST00000283131 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
SMARCA5-201ENST00000283131 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
SMARCA5-201ENST00000283131 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
SMARCA5-201ENST00000283131 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
SMARCA5-201ENST00000283131 ABCC9O60706 1549 aa16.42■□□□□ 0.22
SMARCA5-201ENST00000283131 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
SMARCA5-201ENST00000283131 CDR1P51861 262 aa16.41■□□□□ 0.22
SMARCA5-201ENST00000283131 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
SMARCA5-201ENST00000283131 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
SMARCA5-201ENST00000283131 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
SMARCA5-201ENST00000283131 ODF2Q5BJF6 829 aa16.4■□□□□ 0.22
SMARCA5-201ENST00000283131 TEX35Q5T0J7 233 aa16.4■□□□□ 0.22
SMARCA5-201ENST00000283131 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
SMARCA5-201ENST00000283131 ZNF771Q7L3S4 317 aaPredicted RBP16.39■□□□□ 0.21
SMARCA5-201ENST00000283131 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
SMARCA5-201ENST00000283131 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
SMARCA5-201ENST00000283131 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
SMARCA5-201ENST00000283131 H3BQV1 296 aa16.38■□□□□ 0.21
SMARCA5-201ENST00000283131 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
SMARCA5-201ENST00000283131 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 MAP7D2Q96T17 732 aa16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
SMARCA5-201ENST00000283131 TMF1P82094 1093 aa16.36■□□□□ 0.21
SMARCA5-201ENST00000283131 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
SMARCA5-201ENST00000283131 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
SMARCA5-201ENST00000283131 STK31Q9BXU1 1019 aa16.36■□□□□ 0.21
SMARCA5-201ENST00000283131 CWC22Q9HCG8 908 aaKnown RBP16.36■□□□□ 0.21
SMARCA5-201ENST00000283131 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
SMARCA5-201ENST00000283131 CT47A1Q5JQC4 288 aaPredicted RBP16.35■□□□□ 0.21
SMARCA5-201ENST00000283131 CCDC191Q8NCU4 936 aa16.35■□□□□ 0.21
SMARCA5-201ENST00000283131 RWDD1Q9H446 243 aaPredicted RBP16.35■□□□□ 0.21
SMARCA5-201ENST00000283131 BECN2A8MW95 431 aa16.35■□□□□ 0.21
SMARCA5-201ENST00000283131 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
SMARCA5-201ENST00000283131 AK7Q96M32 723 aa16.35■□□□□ 0.21
SMARCA5-201ENST00000283131 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
SMARCA5-201ENST00000283131 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.21
SMARCA5-201ENST00000283131 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.21
SMARCA5-201ENST00000283131 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
SMARCA5-201ENST00000283131 ST18O60284 1047 aa16.32■□□□□ 0.2
SMARCA5-201ENST00000283131 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
SMARCA5-201ENST00000283131 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 HDGFL2Q7Z4V5 671 aaPredicted RBP16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 RAD21O60216 631 aa16.31■□□□□ 0.2
SMARCA5-201ENST00000283131 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
SMARCA5-201ENST00000283131 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
SMARCA5-201ENST00000283131 KANK1Q14678 1352 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms