RNA–Protein interactions for RNA: ENST00000270221.10

EMP3-201, Transcript of epithelial membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMP3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-201ENST00000270221 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
EMP3-201ENST00000270221 ZFYVE16Q7Z3T8 1539 aa15.94■□□□□ 0.14
EMP3-201ENST00000270221 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
EMP3-201ENST00000270221 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
EMP3-201ENST00000270221 ZMYM4Q5VZL5 1548 aa15.9■□□□□ 0.14
EMP3-201ENST00000270221 ARHGEF12Q9NZN5 1544 aa15.9■□□□□ 0.14
EMP3-201ENST00000270221 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
EMP3-201ENST00000270221 MAGI2Q86UL8 1455 aa15.88■□□□□ 0.13
EMP3-201ENST00000270221 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
EMP3-201ENST00000270221 SETD1BQ9UPS6 1966 aaKnown RBP15.86■□□□□ 0.13
EMP3-201ENST00000270221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
EMP3-201ENST00000270221 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
EMP3-201ENST00000270221 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
EMP3-201ENST00000270221 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
EMP3-201ENST00000270221 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.13
EMP3-201ENST00000270221 CLIP1P30622 1438 aa15.83■□□□□ 0.12
EMP3-201ENST00000270221 HSPA1LP34931 641 aa15.82■□□□□ 0.12
EMP3-201ENST00000270221 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
EMP3-201ENST00000270221 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
EMP3-201ENST00000270221 ATP10AO60312 1499 aa15.8■□□□□ 0.12
EMP3-201ENST00000270221 C9orf84Q5VXU9 1444 aa15.8■□□□□ 0.12
EMP3-201ENST00000270221 ZNF335Q9H4Z2 1342 aaPredicted RBP15.8■□□□□ 0.12
EMP3-201ENST00000270221 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
EMP3-201ENST00000270221 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
EMP3-201ENST00000270221 PIP4K2BP78356 416 aa15.75■□□□□ 0.11
EMP3-201ENST00000270221 PCGF6Q9BYE7 350 aa15.74■□□□□ 0.11
EMP3-201ENST00000270221 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
EMP3-201ENST00000270221 PLEKHD1A6NEE1 506 aa15.73■□□□□ 0.11
EMP3-201ENST00000270221 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
EMP3-201ENST00000270221 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
EMP3-201ENST00000270221 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
EMP3-201ENST00000270221 APLP2Q06481 763 aa15.72■□□□□ 0.11
EMP3-201ENST00000270221 C3P01024 1663 aa15.72■□□□□ 0.11
EMP3-201ENST00000270221 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
EMP3-201ENST00000270221 NCKAP5LQ9HCH0 1330 aa15.7■□□□□ 0.1
EMP3-201ENST00000270221 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■□□□□ 10.6
EMP3-201ENST00000270221 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
EMP3-201ENST00000270221 TOM1O60784 492 aa15.69■□□□□ 0.1
EMP3-201ENST00000270221 NUP153P49790 1475 aaKnown RBP15.67■□□□□ 0.1
EMP3-201ENST00000270221 PKD2Q13563 968 aa15.64■□□□□ 0.09
EMP3-201ENST00000270221 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
EMP3-201ENST00000270221 PLCH2O75038 1416 aa15.6■□□□□ 0.09
EMP3-201ENST00000270221 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
EMP3-201ENST00000270221 CNTLNQ9NXG0 1405 aa15.59■□□□□ 0.09
EMP3-201ENST00000270221 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
EMP3-201ENST00000270221 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
EMP3-201ENST00000270221 NPATQ14207 1427 aa15.58■□□□□ 0.08
EMP3-201ENST00000270221 ZNF518AQ6AHZ1 1483 aa15.58■□□□□ 0.08
EMP3-201ENST00000270221 SAMD9Q5K651 1589 aa15.58■□□□□ 0.08
EMP3-201ENST00000270221 EFCAB2Q5VUJ9 269 aa15.57■□□□□ 0.08
EMP3-201ENST00000270221 AGLP35573 1532 aa15.57■□□□□ 0.08
EMP3-201ENST00000270221 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
EMP3-201ENST00000270221 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
EMP3-201ENST00000270221 TCOF1Q13428 1488 aaKnown RBP15.56■□□□□ 0.08
EMP3-201ENST00000270221 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
EMP3-201ENST00000270221 DIP2CQ9Y2E4 1556 aa15.56■□□□□ 0.08
EMP3-201ENST00000270221 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
EMP3-201ENST00000270221 CPS1P31327 1500 aa15.54■□□□□ 0.08
EMP3-201ENST00000270221 KDM5CP41229 1560 aa15.53■□□□□ 0.08
EMP3-201ENST00000270221 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
EMP3-201ENST00000270221 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
EMP3-201ENST00000270221 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.08
EMP3-201ENST00000270221 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
EMP3-201ENST00000270221 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
EMP3-201ENST00000270221 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
EMP3-201ENST00000270221 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
EMP3-201ENST00000270221 ZNF142P52746 1687 aaPredicted RBP15.5■□□□□ 0.07
EMP3-201ENST00000270221 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
EMP3-201ENST00000270221 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
EMP3-201ENST00000270221 CEP170BQ9Y4F5 1589 aaPredicted RBP15.49■□□□□ 0.07
EMP3-201ENST00000270221 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
EMP3-201ENST00000270221 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
EMP3-201ENST00000270221 MLH3Q9UHC1 1453 aa15.47■□□□□ 0.07
EMP3-201ENST00000270221 ALKQ9UM73 1620 aa15.47■□□□□ 0.07
EMP3-201ENST00000270221 HRCP23327 699 aa15.47■□□□□ 0.07
EMP3-201ENST00000270221 POTEAQ6S8J7 498 aa15.47■□□□□ 0.07
EMP3-201ENST00000270221 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
EMP3-201ENST00000270221 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
EMP3-201ENST00000270221 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
EMP3-201ENST00000270221 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
EMP3-201ENST00000270221 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
EMP3-201ENST00000270221 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
EMP3-201ENST00000270221 SETD1AO15047 1707 aaKnown RBP15.38■□□□□ 0.05
EMP3-201ENST00000270221 NEURL4Q96JN8 1562 aa15.37■□□□□ 0.05
EMP3-201ENST00000270221 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
EMP3-201ENST00000270221 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
EMP3-201ENST00000270221 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
EMP3-201ENST00000270221 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
EMP3-201ENST00000270221 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
EMP3-201ENST00000270221 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
EMP3-201ENST00000270221 KIDINS220Q9ULH0 1771 aa15.34■□□□□ 0.05
EMP3-201ENST00000270221 CDK11AQ9UQ88 783 aaPredicted RBP15.34■□□□□ 0.05
EMP3-201ENST00000270221 KIF14Q15058 1648 aa15.34■□□□□ 0.05
EMP3-201ENST00000270221 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
EMP3-201ENST00000270221 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
EMP3-201ENST00000270221 ANKLE2Q86XL3 938 aa15.32■□□□□ 0.04
EMP3-201ENST00000270221 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
EMP3-201ENST00000270221 ATP1B4Q9UN42 357 aaPredicted RBP15.31■□□□□ 0.04
EMP3-201ENST00000270221 ABCC1P33527 1531 aa15.31■□□□□ 0.04
EMP3-201ENST00000270221 LRRC9Q6ZRR7 1453 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms