RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
SNCAIP-202ENST00000261368 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
SNCAIP-202ENST00000261368 PKD2Q13563 968 aa21.91■■□□□ 1.1
SNCAIP-202ENST00000261368 ZBED9Q6R2W3 1325 aa21.88■■□□□ 1.09
SNCAIP-202ENST00000261368 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
SNCAIP-202ENST00000261368 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
SNCAIP-202ENST00000261368 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
SNCAIP-202ENST00000261368 CHMP7Q8WUX9 453 aaPredicted RBP21.84■■□□□ 1.09
SNCAIP-202ENST00000261368 FANCIQ9NVI1 1328 aa21.84■■□□□ 1.09
SNCAIP-202ENST00000261368 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.09
SNCAIP-202ENST00000261368 ERICH6BQ5W0A0 696 aa21.83■■□□□ 1.08
SNCAIP-202ENST00000261368 UGGT2Q9NYU1 1516 aa21.83■■□□□ 1.08
SNCAIP-202ENST00000261368 ANP32AP39687 249 aaKnown RBP21.81■■□□□ 1.08
SNCAIP-202ENST00000261368 RGL3Q3MIN7 710 aa21.81■■□□□ 1.08
SNCAIP-202ENST00000261368 DCAF11Q8TEB1 546 aa21.79■■□□□ 1.08
SNCAIP-202ENST00000261368 ANKRD30BQ9BXX2 1392 aa21.79■■□□□ 1.08
SNCAIP-202ENST00000261368 KDM6BO15054 1643 aa21.78■■□□□ 1.08
SNCAIP-202ENST00000261368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
SNCAIP-202ENST00000261368 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
SNCAIP-202ENST00000261368 USP47Q96K76 1375 aa21.78■■□□□ 1.08
SNCAIP-202ENST00000261368 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
SNCAIP-202ENST00000261368 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
SNCAIP-202ENST00000261368 NCOA1Q15788 1441 aa21.77■■□□□ 1.08
SNCAIP-202ENST00000261368 NUDCQ9Y266 331 aa21.76■■□□□ 1.07
SNCAIP-202ENST00000261368 DAPK1P53355 1430 aa21.75■■□□□ 1.07
SNCAIP-202ENST00000261368 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
SNCAIP-202ENST00000261368 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
SNCAIP-202ENST00000261368 HECW1Q76N89 1606 aa21.75■■□□□ 1.07
SNCAIP-202ENST00000261368 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
SNCAIP-202ENST00000261368 NOP58Q9Y2X3 529 aaKnown RBP21.74■■□□□ 1.07
SNCAIP-202ENST00000261368 SAMD9Q5K651 1589 aa21.73■■□□□ 1.07
SNCAIP-202ENST00000261368 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
SNCAIP-202ENST00000261368 NUP155O75694 1391 aa21.73■■□□□ 1.07
SNCAIP-202ENST00000261368 ST20-MTHFSA0A0A6YYL1 179 aa21.72■■□□□ 1.07
SNCAIP-202ENST00000261368 ABCC5O15440 1437 aa21.71■■□□□ 1.07
SNCAIP-202ENST00000261368 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.06
SNCAIP-202ENST00000261368 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
SNCAIP-202ENST00000261368 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
SNCAIP-202ENST00000261368 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
SNCAIP-202ENST00000261368 IQGAP2Q13576 1575 aa21.69■■□□□ 1.06
SNCAIP-202ENST00000261368 ZBTB47Q9UFB7 747 aaPredicted RBP21.69■■□□□ 1.06
SNCAIP-202ENST00000261368 RPRD2Q5VT52 1461 aaKnown RBP21.68■■□□□ 1.06
SNCAIP-202ENST00000261368 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
SNCAIP-202ENST00000261368 TCOF1Q13428 1488 aaKnown RBP21.66■■□□□ 1.06
SNCAIP-202ENST00000261368 DEKP35659 375 aaKnown RBP21.66■■□□□ 1.06
SNCAIP-202ENST00000261368 HNRNPMP52272 730 aaKnown RBP eCLIP21.65■■□□□ 1.06
SNCAIP-202ENST00000261368 CC2D1BQ5T0F9 858 aaKnown RBP21.65■■□□□ 1.06
SNCAIP-202ENST00000261368 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
SNCAIP-202ENST00000261368 ANKRD30AQ9BXX3 1397 aa21.65■■□□□ 1.06
SNCAIP-202ENST00000261368 PAK3O75914 559 aaPredicted RBP21.64■■□□□ 1.06
SNCAIP-202ENST00000261368 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
SNCAIP-202ENST00000261368 PNISRQ8TF01 805 aaKnown RBP21.59■■□□□ 1.05
SNCAIP-202ENST00000261368 EXOC6Q8TAG9 804 aa21.58■■□□□ 1.04
SNCAIP-202ENST00000261368 ROCK2O75116 1388 aaKnown RBP21.57■■□□□ 1.04
SNCAIP-202ENST00000261368 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
SNCAIP-202ENST00000261368 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
SNCAIP-202ENST00000261368 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
SNCAIP-202ENST00000261368 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
SNCAIP-202ENST00000261368 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
SNCAIP-202ENST00000261368 RCAN3Q9UKA8 241 aa21.55■■□□□ 1.04
SNCAIP-202ENST00000261368 GCC2Q8IWJ2 1684 aa21.55■■□□□ 1.04
SNCAIP-202ENST00000261368 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
SNCAIP-202ENST00000261368 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
SNCAIP-202ENST00000261368 LAS1LQ9Y4W2 734 aaKnown RBP21.54■■□□□ 1.04
SNCAIP-202ENST00000261368 WDR62O43379 1518 aa21.53■■□□□ 1.04
SNCAIP-202ENST00000261368 PLIN1O60240 522 aa21.53■■□□□ 1.04
SNCAIP-202ENST00000261368 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
SNCAIP-202ENST00000261368 KIF15Q9NS87 1388 aa21.53■■□□□ 1.04
SNCAIP-202ENST00000261368 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.04
SNCAIP-202ENST00000261368 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
SNCAIP-202ENST00000261368 MYBBP1AQ9BQG0 1328 aaKnown RBP21.51■■□□□ 1.03
SNCAIP-202ENST00000261368 IPO9Q96P70 1041 aaKnown RBP21.51■■□□□ 1.03
SNCAIP-202ENST00000261368 NUP153P49790 1475 aaKnown RBP21.51■■□□□ 1.03
SNCAIP-202ENST00000261368 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
SNCAIP-202ENST00000261368 CAMSAP2Q08AD1 1489 aa21.5■■□□□ 1.03
SNCAIP-202ENST00000261368 DHX29Q7Z478 1369 aaKnown RBP21.5■■□□□ 1.03
SNCAIP-202ENST00000261368 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
SNCAIP-202ENST00000261368 RALBP1Q15311 655 aa21.5■■□□□ 1.03
SNCAIP-202ENST00000261368 RRP1P56182 461 aaKnown RBP21.49■■□□□ 1.03
SNCAIP-202ENST00000261368 CDCA7LQ96GN5 454 aa21.49■■□□□ 1.03
SNCAIP-202ENST00000261368 DAXXQ9UER7 740 aaPredicted RBP21.48■■□□□ 1.03
SNCAIP-202ENST00000261368 NBPF1Q3BBV0 1214 aa21.47■■□□□ 1.03
SNCAIP-202ENST00000261368 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
SNCAIP-202ENST00000261368 KIAA0586Q9BVV6 1533 aa21.46■■□□□ 1.03
SNCAIP-202ENST00000261368 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
SNCAIP-202ENST00000261368 PZPP20742 1482 aa21.46■■□□□ 1.03
SNCAIP-202ENST00000261368 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
SNCAIP-202ENST00000261368 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
SNCAIP-202ENST00000261368 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
SNCAIP-202ENST00000261368 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
SNCAIP-202ENST00000261368 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
SNCAIP-202ENST00000261368 SKAP1Q86WV1 359 aa21.42■■□□□ 1.02
SNCAIP-202ENST00000261368 DNMT1P26358 1616 aaKnown RBP21.41■■□□□ 1.02
SNCAIP-202ENST00000261368 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
SNCAIP-202ENST00000261368 PANK3Q9H999 370 aa21.4■■□□□ 1.02
SNCAIP-202ENST00000261368 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
SNCAIP-202ENST00000261368 PBRM1Q86U86 1689 aa21.39■■□□□ 1.01
SNCAIP-202ENST00000261368 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.01
SNCAIP-202ENST00000261368 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.01
SNCAIP-202ENST00000261368 DISP1Q96F81 1524 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms